BLASTX nr result

ID: Glycyrrhiza23_contig00018742 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00018742
         (474 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003601352.1| Tir-nbs-lrr resistance protein [Medicago tru...    80   2e-13
ref|XP_003543819.1| PREDICTED: TMV resistance protein N-like [Gl...    72   4e-11
ref|XP_003594998.1| TMV resistance protein N [Medicago truncatul...    70   2e-10
gb|ABD33387.2| TIR [Medicago truncatula]                               70   2e-10
ref|XP_003601353.1| TIR-NBS-LRR type disease resistance protein ...    65   6e-09

>ref|XP_003601352.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
            gi|355490400|gb|AES71603.1| Tir-nbs-lrr resistance
            protein [Medicago truncatula]
          Length = 1545

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 55/139 (39%), Positives = 73/139 (52%), Gaps = 1/139 (0%)
 Frame = +1

Query: 1    RNHSMLEVLCIRDCEKLVXXXXXXXXXXQCLELTNCSSTSLDT-QGPLLENILQSMSYIK 177
            +N SMLE LC+ +C KL             L   NC      + Q  +LEN++Q   ++ 
Sbjct: 1271 QNISMLEWLCLDECRKLKFIPKLPVSLRN-LSAANCIYVDTGSVQRSMLENMIQR--HLT 1327

Query: 178  PPAPKSQINGLRFSSYFFSVPGAQVPGMFEFHTTEASITIPPIPKSNLCGFIFCFILSGG 357
                +S      F  +FF +PG Q+P  F F +TEASI IPPIPKS+LC  IFC I S G
Sbjct: 1328 NFRDRSNC----FQEFFF-LPGDQIPCEFYFQSTEASIVIPPIPKSDLCCLIFCIIFSEG 1382

Query: 358  TSLRDIFLDCYIYEHGKKV 414
             +     L C IY+H K+V
Sbjct: 1383 LTFFYNNLCCTIYQHKKEV 1401


>ref|XP_003543819.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 970

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 50/137 (36%), Positives = 70/137 (51%)
 Frame = +1

Query: 4    NHSMLEVLCIRDCEKLVXXXXXXXXXXQCLELTNCSSTSLDTQGPLLENILQSMSYIKPP 183
            N SM+ ++ + DC KLV          +   L+ C+ TSLDT+    + +LQ M   + P
Sbjct: 764  NLSMMTMIWLDDCRKLVSLPELPLFLEK---LSACNCTSLDTK-ITQQQVLQHMLQSRIP 819

Query: 184  APKSQINGLRFSSYFFSVPGAQVPGMFEFHTTEASITIPPIPKSNLCGFIFCFILSGGTS 363
              +          YFF  PG  V     FHTT+ SITIP + K  LCGFI+C ILS G  
Sbjct: 820  YLRKHYLKCYDEEYFF--PGDHVIDECRFHTTQNSITIPYLQKPELCGFIYCIILSMG-P 876

Query: 364  LRDIFLDCYIYEHGKKV 414
            L +  + C +Y+ G +V
Sbjct: 877  LLECDVSCSVYQDGIRV 893


>ref|XP_003594998.1| TMV resistance protein N [Medicago truncatula]
            gi|355484046|gb|AES65249.1| TMV resistance protein N
            [Medicago truncatula]
          Length = 1179

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 48/131 (36%), Positives = 67/131 (51%), Gaps = 4/131 (3%)
 Frame = +1

Query: 94   ELTNCSSTSLDT---QGPLLENILQSMSYIKPPAPKSQINGLRFSSYFFSV-PGAQVPGM 261
            +L+  + T LDT   Q  +L+N+L    + +P           F  YF S+ P A+VP  
Sbjct: 950  DLSAINCTYLDTNSIQREMLKNMLYRFRFGEP-----------FPEYFLSLLPVAEVPWG 998

Query: 262  FEFHTTEASITIPPIPKSNLCGFIFCFILSGGTSLRDIFLDCYIYEHGKKVDDHCLRCLY 441
            F+F TTEASI IPPIPK  L   + C  LS G +L    +DC IY HG + ++  +   +
Sbjct: 999  FDFFTTEASIIIPPIPKDGLNQIVLCVFLSEGLNLTFSGVDCTIYNHGDRSNEWSIS--F 1056

Query: 442  NCAQPPFISDH 474
                   ISDH
Sbjct: 1057 VNVSGAMISDH 1067


>gb|ABD33387.2| TIR [Medicago truncatula]
          Length = 1208

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 48/131 (36%), Positives = 67/131 (51%), Gaps = 4/131 (3%)
 Frame = +1

Query: 94   ELTNCSSTSLDT---QGPLLENILQSMSYIKPPAPKSQINGLRFSSYFFSV-PGAQVPGM 261
            +L+  + T LDT   Q  +L+N+L    + +P           F  YF S+ P A+VP  
Sbjct: 979  DLSAINCTYLDTNSIQREMLKNMLYRFRFGEP-----------FPEYFLSLLPVAEVPWG 1027

Query: 262  FEFHTTEASITIPPIPKSNLCGFIFCFILSGGTSLRDIFLDCYIYEHGKKVDDHCLRCLY 441
            F+F TTEASI IPPIPK  L   + C  LS G +L    +DC IY HG + ++  +   +
Sbjct: 1028 FDFFTTEASIIIPPIPKDGLNQIVLCVFLSEGLNLTFSGVDCTIYNHGDRSNEWSIS--F 1085

Query: 442  NCAQPPFISDH 474
                   ISDH
Sbjct: 1086 VNVSGAMISDH 1096


>ref|XP_003601353.1| TIR-NBS-LRR type disease resistance protein [Medicago truncatula]
            gi|355490401|gb|AES71604.1| TIR-NBS-LRR type disease
            resistance protein [Medicago truncatula]
          Length = 1133

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 48/139 (34%), Positives = 66/139 (47%), Gaps = 3/139 (2%)
 Frame = +1

Query: 1    RNHSMLEVLCIRDCEKLVXXXXXXXXXXQCLELTNCSSTSLDT-QGPLLENILQSMSYIK 177
            +N+S L VL + +C KL           + L   NC+   +D+ Q P+LENIL  +  I 
Sbjct: 890  QNNSKLAVLNLDECRKLKSLPKLPASLTE-LRAINCTDLDIDSIQRPMLENILHKLHTID 948

Query: 178  PPAPKSQINGLRFSSYFFSVPGAQVPGMFEFHTTEASITIPPIPKSNLCGFIFCFILSG- 354
                +       F+     +PG  VP  F F T E+SI IP  PK  L   IFC ILSG 
Sbjct: 949  NEGDRILDTNFGFTF----LPGDHVPDKFGFLTRESSIVIPLDPKCKLSALIFCIILSGR 1004

Query: 355  -GTSLRDIFLDCYIYEHGK 408
             G     +  DC  +++GK
Sbjct: 1005 YGDYYESVCCDC--FQNGK 1021


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