BLASTX nr result

ID: Glycyrrhiza23_contig00018723 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00018723
         (517 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK33630.1| unknown [Lotus japonicus]                              233   1e-59
ref|XP_003612457.1| Pentatricopeptide repeat-containing protein ...   230   8e-59
ref|XP_003516509.1| PREDICTED: pentatricopeptide repeat-containi...   221   6e-56
ref|XP_003631528.1| PREDICTED: pentatricopeptide repeat-containi...   178   5e-43
emb|CAN69066.1| hypothetical protein VITISV_016070 [Vitis vinifera]   178   5e-43

>gb|AFK33630.1| unknown [Lotus japonicus]
          Length = 356

 Score =  233 bits (594), Expect = 1e-59
 Identities = 119/152 (78%), Positives = 131/152 (86%)
 Frame = -3

Query: 515 KIVSGCRERHYSEAFGDFKEMGRVGIKKDSFTFSSVLKACGMMQLDHGRWCGEQVHADAI 336
           KIVSGCRE  + E F DFKEMGR GIKKD++TFSSVLKACG M +DHGR CGEQVHADA+
Sbjct: 205 KIVSGCREMDFPEVFNDFKEMGRQGIKKDTYTFSSVLKACGKM-MDHGR-CGEQVHADAM 262

Query: 335 KLGLVSDNYVQCSLIAMYGRSGLLREAKQVFEFEMMTPNGRKVGSWNAMLMGYIRNGLYI 156
           KLGL SDNYVQCSLIAMYGRSGLLR+AKQVFE    + + R V SWNAMLMGY+ NGLYI
Sbjct: 263 KLGLASDNYVQCSLIAMYGRSGLLRDAKQVFE---TSRSERNVDSWNAMLMGYLENGLYI 319

Query: 155 EAVKFLYHMKAAGVQPHESLLEKVRIACGSFT 60
           EAVKFLY MKAAG++PHESLL+KVRIACGS T
Sbjct: 320 EAVKFLYQMKAAGLKPHESLLDKVRIACGSVT 351


>ref|XP_003612457.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355513792|gb|AES95415.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 418

 Score =  230 bits (587), Expect = 8e-59
 Identities = 121/150 (80%), Positives = 131/150 (87%)
 Frame = -3

Query: 515 KIVSGCRERHYSEAFGDFKEMGRVGIKKDSFTFSSVLKACGMMQLDHGRWCGEQVHADAI 336
           KIVS CRERH+SEA GDFK+MGRVG+KKDSFTFSSVLKACG MQ + G  CGEQVHADAI
Sbjct: 267 KIVSSCRERHFSEALGDFKKMGRVGVKKDSFTFSSVLKACGRMQ-NRGS-CGEQVHADAI 324

Query: 335 KLGLVSDNYVQCSLIAMYGRSGLLREAKQVFEFEMMTPNGRKVGSWNAMLMGYIRNGLYI 156
           KLGL SD+YVQCSLIAMYGRSGLLR+A+ VFE   MT N R V S NAMLMGYI+NGLYI
Sbjct: 325 KLGLDSDSYVQCSLIAMYGRSGLLRDAELVFE---MTRNERNVDSLNAMLMGYIQNGLYI 381

Query: 155 EAVKFLYHMKAAGVQPHESLLEKVRIACGS 66
           EAVKF+Y MKAAGVQPHE LLEK+RIACGS
Sbjct: 382 EAVKFVYQMKAAGVQPHEPLLEKLRIACGS 411


>ref|XP_003516509.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g31790-like [Glycine max]
          Length = 423

 Score =  221 bits (562), Expect = 6e-56
 Identities = 114/152 (75%), Positives = 128/152 (84%)
 Frame = -3

Query: 515 KIVSGCRERHYSEAFGDFKEMGRVGIKKDSFTFSSVLKACGMMQLDHGRWCGEQVHADAI 336
           KIVSGCRERH+SE F DFKEMG  G+KKD FTFSSVLKACG M L+  R CGEQVH DAI
Sbjct: 272 KIVSGCRERHFSEVFDDFKEMGMRGVKKDCFTFSSVLKACGRM-LNQER-CGEQVHVDAI 329

Query: 335 KLGLVSDNYVQCSLIAMYGRSGLLREAKQVFEFEMMTPNGRKVGSWNAMLMGYIRNGLYI 156
           KLGLVSD+YVQCSLIAMYGR GLL +AK+VFE   M+   RKV  WNAMLMGYI+NGLYI
Sbjct: 330 KLGLVSDHYVQCSLIAMYGRCGLLEDAKRVFE---MSQEERKVDCWNAMLMGYIQNGLYI 386

Query: 155 EAVKFLYHMKAAGVQPHESLLEKVRIACGSFT 60
           EAVKFLY M+AAG+QP ESLL+K+R+ACGS +
Sbjct: 387 EAVKFLYQMQAAGMQPRESLLKKLRMACGSIS 418


>ref|XP_003631528.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g31790-like [Vitis vinifera]
          Length = 414

 Score =  178 bits (451), Expect = 5e-43
 Identities = 92/152 (60%), Positives = 113/152 (74%)
 Frame = -3

Query: 515 KIVSGCRERHYSEAFGDFKEMGRVGIKKDSFTFSSVLKACGMMQLDHGRWCGEQVHADAI 336
           K+V+ C+  +  EA   F EMGR G+K++ FT+SSVL+ACG M+ DHGR CG  +HA  I
Sbjct: 256 KMVNKCQGEYMHEALVAFTEMGRAGVKRNEFTYSSVLRACGRMK-DHGR-CGRLIHASTI 313

Query: 335 KLGLVSDNYVQCSLIAMYGRSGLLREAKQVFEFEMMTPNGRKVGSWNAMLMGYIRNGLYI 156
           KLGL SD YVQC L+ MYG+ GLL EA++VFE    T N   +  WNAML GYIR+GLYI
Sbjct: 314 KLGLESDIYVQCGLVDMYGKCGLLVEARRVFETVSDT-NKTNIVCWNAMLTGYIRHGLYI 372

Query: 155 EAVKFLYHMKAAGVQPHESLLEKVRIACGSFT 60
           EA+KFLY MKAAG+QP ESLL ++RIACGS T
Sbjct: 373 EAIKFLYQMKAAGIQPQESLLNELRIACGSTT 404


>emb|CAN69066.1| hypothetical protein VITISV_016070 [Vitis vinifera]
          Length = 543

 Score =  178 bits (451), Expect = 5e-43
 Identities = 92/152 (60%), Positives = 113/152 (74%)
 Frame = -3

Query: 515 KIVSGCRERHYSEAFGDFKEMGRVGIKKDSFTFSSVLKACGMMQLDHGRWCGEQVHADAI 336
           K+V+ C+  +  EA   F EMGR G+K++ FT+SSVL+ACG M+ DHGR CG  +HA  I
Sbjct: 385 KMVNKCQGEYMHEALVAFTEMGRAGVKRNEFTYSSVLRACGRMK-DHGR-CGRLIHASTI 442

Query: 335 KLGLVSDNYVQCSLIAMYGRSGLLREAKQVFEFEMMTPNGRKVGSWNAMLMGYIRNGLYI 156
           KLGL SD YVQC L+ MYG+ GLL EA++VFE    T N   +  WNAML GYIR+GLYI
Sbjct: 443 KLGLESDIYVQCGLVDMYGKCGLLVEARRVFETVSDT-NKTNIVCWNAMLTGYIRHGLYI 501

Query: 155 EAVKFLYHMKAAGVQPHESLLEKVRIACGSFT 60
           EA+KFLY MKAAG+QP ESLL ++RIACGS T
Sbjct: 502 EAIKFLYQMKAAGIQPQESLLNELRIACGSTT 533


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