BLASTX nr result

ID: Glycyrrhiza23_contig00018710 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00018710
         (366 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003544838.1| PREDICTED: MADS-box transcription factor 27-...    98   8e-19
ref|XP_003518271.1| PREDICTED: MADS-box transcription factor 27-...    96   4e-18
ref|XP_003615360.1| MADS-box protein [Medicago truncatula] gi|35...    92   6e-17
ref|XP_002307325.1| predicted protein [Populus trichocarpa] gi|2...    75   4e-12
ref|XP_002527350.1| mads box protein, putative [Ricinus communis...    72   5e-11

>ref|XP_003544838.1| PREDICTED: MADS-box transcription factor 27-like [Glycine max]
          Length = 239

 Score = 97.8 bits (242), Expect = 8e-19
 Identities = 49/65 (75%), Positives = 53/65 (81%)
 Frame = +3

Query: 120 ELKKRVSLTQVYGTTDENGTSRDSALTNGLGIGDDLQAPVNLQLSQPQQQHYKAPSGTTK 299
           ELKK+V     YGT D+N T+RDS LTNGLGIG+DLQ PVNLQLSQPQQQHYK PSGTTK
Sbjct: 179 ELKKKV-----YGTKDDNKTNRDSVLTNGLGIGEDLQVPVNLQLSQPQQQHYKEPSGTTK 233

Query: 300 LGYDL 314
           LG  L
Sbjct: 234 LGLQL 238


>ref|XP_003518271.1| PREDICTED: MADS-box transcription factor 27-like [Glycine max]
          Length = 243

 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 50/67 (74%), Positives = 55/67 (82%), Gaps = 2/67 (2%)
 Frame = +3

Query: 120 ELKKRVSLTQVYGTTDENGTSRDSALTNGLGIGDDLQAPVNLQLSQP--QQQHYKAPSGT 293
           ELKK+V     YGT D+N T+RDS LTNGLGIG+DLQ PVNLQLSQP  QQQHYKA SGT
Sbjct: 179 ELKKKV-----YGTQDDNETNRDSVLTNGLGIGEDLQVPVNLQLSQPQQQQQHYKASSGT 233

Query: 294 TKLGYDL 314
           TKLGY+L
Sbjct: 234 TKLGYEL 240


>ref|XP_003615360.1| MADS-box protein [Medicago truncatula] gi|355516695|gb|AES98318.1|
           MADS-box protein [Medicago truncatula]
          Length = 169

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 43/56 (76%), Positives = 48/56 (85%)
 Frame = +3

Query: 147 QVYGTTDENGTSRDSALTNGLGIGDDLQAPVNLQLSQPQQQHYKAPSGTTKLGYDL 314
           +VYGT D+NGT+R  +LTNG+GIGDD   PVNLQLSQPQQQHYKAPSGTTKLG  L
Sbjct: 113 KVYGTKDKNGTNRVLSLTNGVGIGDDSNVPVNLQLSQPQQQHYKAPSGTTKLGLQL 168


>ref|XP_002307325.1| predicted protein [Populus trichocarpa] gi|222856774|gb|EEE94321.1|
           predicted protein [Populus trichocarpa]
          Length = 244

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 43/93 (46%), Positives = 58/93 (62%)
 Frame = +3

Query: 33  LDGNRR*NNHLKLNYPLLKRGQPC*VFYSELKKRVSLTQVYGTTDENGTSRDSALTNGLG 212
           L+ NR+ N   + N  L K+         EL K+V     YGT + NG +R+S LTNGLG
Sbjct: 150 LELNRKGNLIHQENMELYKKANLICHENQELYKKV-----YGTREVNGANRNSLLTNGLG 204

Query: 213 IGDDLQAPVNLQLSQPQQQHYKAPSGTTKLGYD 311
           +G++   PV+LQLSQPQQQ+Y  P+  TKLGY+
Sbjct: 205 MGEESHVPVHLQLSQPQQQNYDTPASATKLGYN 237


>ref|XP_002527350.1| mads box protein, putative [Ricinus communis]
           gi|223533269|gb|EEF35022.1| mads box protein, putative
           [Ricinus communis]
          Length = 262

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 38/73 (52%), Positives = 49/73 (67%), Gaps = 9/73 (12%)
 Frame = +3

Query: 120 ELKKRVSLTQ---------VYGTTDENGTSRDSALTNGLGIGDDLQAPVNLQLSQPQQQH 272
           EL K+V+L +         VYGT + N  +RD   TNGLGIG++   PV+LQLSQPQQQ+
Sbjct: 165 ELYKKVNLIRQENTELYKKVYGTGNTNAANRDYLSTNGLGIGEEPNVPVHLQLSQPQQQN 224

Query: 273 YKAPSGTTKLGYD 311
           Y  P+ TTKLGY+
Sbjct: 225 YDPPARTTKLGYN 237


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