BLASTX nr result

ID: Glycyrrhiza23_contig00018704 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00018704
         (1207 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004153172.1| PREDICTED: NADH dehydrogenase [ubiquinone] i...   211   4e-52
emb|CBI31099.3| unnamed protein product [Vitis vinifera]              202   1e-49
ref|XP_002535137.1| NADH-ubiquinone oxidoreductase fe-s protein,...   182   2e-43
sp|P93306.2|NDUS2_ARATH RecName: Full=NADH dehydrogenase [ubiqui...   181   3e-43
ref|YP_717100.1| NADH dehydrogenase subunit 7 [Brassica napus] g...   179   1e-42

>ref|XP_004153172.1| PREDICTED: NADH dehydrogenase [ubiquinone] iron-sulfur protein
           2-like [Cucumis sativus]
           gi|449471067|ref|XP_004153199.1| PREDICTED: NADH
           dehydrogenase [ubiquinone] iron-sulfur protein 2-like
           [Cucumis sativus] gi|449471614|ref|XP_004153361.1|
           PREDICTED: NADH dehydrogenase [ubiquinone] iron-sulfur
           protein 2-like [Cucumis sativus]
           gi|449472439|ref|XP_004153594.1| PREDICTED: NADH
           dehydrogenase [ubiquinone] iron-sulfur protein 2-like
           [Cucumis sativus] gi|449472462|ref|XP_004153601.1|
           PREDICTED: NADH dehydrogenase [ubiquinone] iron-sulfur
           protein 2-like [Cucumis sativus]
           gi|449532418|ref|XP_004173178.1| PREDICTED: NADH
           dehydrogenase [ubiquinone] iron-sulfur protein 2-like
           [Cucumis sativus]
          Length = 137

 Score =  211 bits (536), Expect = 4e-52
 Identities = 117/167 (70%), Positives = 117/167 (70%)
 Frame = -2

Query: 555 MCYNAEPRTLRLIYXXXXXXXXXXXXLVMAQSIDRKPYDGKLSR*VWREIGPIILYNRES 376
           MCYNAEPRTLRLIY            LVMAQSIDRKPYDGKL R                
Sbjct: 1   MCYNAEPRTLRLIYISSQLSSSRISSLVMAQSIDRKPYDGKLPR---------------- 44

Query: 375 RCKLFLSIAGQMTTGSSVYSTSIHHFELYTEGFSVPASSTYTAVEAPKGEFGVFLVSNGS 196
                          SSVYSTSIHHFELYTEGFSVPASSTYTAVEAPKGEFGVFLVSNGS
Sbjct: 45  --------------SSSVYSTSIHHFELYTEGFSVPASSTYTAVEAPKGEFGVFLVSNGS 90

Query: 195 NRPYRCKIRAPGFAHLQGLDFMSKHHMLADVVTIIGTQDIVFGEVDR 55
           NRPYR KIRAPG AH QGLD MSKHHM ADVVTIIGTQDIV GEVDR
Sbjct: 91  NRPYRRKIRAPGSAHSQGLDSMSKHHMPADVVTIIGTQDIVSGEVDR 137


>emb|CBI31099.3| unnamed protein product [Vitis vinifera]
          Length = 385

 Score =  202 bits (515), Expect = 1e-49
 Identities = 103/113 (91%), Positives = 103/113 (91%)
 Frame = -2

Query: 393 LYNRESRCKLFLSIAGQMTTGSSVYSTSIHHFELYTEGFSVPASSTYTAVEAPKGEFGVF 214
           LYNR SRCKLFLSIAGQMTTGSSVYSTSIHHFE YTEGF VPA STYTAVEAPKGEFGVF
Sbjct: 273 LYNRGSRCKLFLSIAGQMTTGSSVYSTSIHHFEPYTEGFFVPAPSTYTAVEAPKGEFGVF 332

Query: 213 LVSNGSNRPYRCKIRAPGFAHLQGLDFMSKHHMLADVVTIIGTQDIVFGEVDR 55
           LVSNGSNRPYR KIRAPG AH QGLD MSKHHM ADVVTIIGTQDIV GEVDR
Sbjct: 333 LVSNGSNRPYRRKIRAPGSAHSQGLDSMSKHHMPADVVTIIGTQDIVSGEVDR 385


>ref|XP_002535137.1| NADH-ubiquinone oxidoreductase fe-s protein, putative [Ricinus
           communis] gi|223523942|gb|EEF27243.1| NADH-ubiquinone
           oxidoreductase fe-s protein, putative [Ricinus communis]
          Length = 96

 Score =  182 bits (461), Expect = 2e-43
 Identities = 91/96 (94%), Positives = 91/96 (94%)
 Frame = -2

Query: 342 MTTGSSVYSTSIHHFELYTEGFSVPASSTYTAVEAPKGEFGVFLVSNGSNRPYRCKIRAP 163
           MTTGSSVYSTSIHHFELYTEGFSVPASSTYTAVEAPKGEFGVFLVSNGSNRPYR KIRAP
Sbjct: 1   MTTGSSVYSTSIHHFELYTEGFSVPASSTYTAVEAPKGEFGVFLVSNGSNRPYRRKIRAP 60

Query: 162 GFAHLQGLDFMSKHHMLADVVTIIGTQDIVFGEVDR 55
           G AH QGLD MSKHHM ADVVTIIGTQDIVFGEVDR
Sbjct: 61  GSAHSQGLDSMSKHHMPADVVTIIGTQDIVFGEVDR 96


>sp|P93306.2|NDUS2_ARATH RecName: Full=NADH dehydrogenase [ubiquinone] iron-sulfur protein
           2; AltName: Full=NADH dehydrogenase subunit 7
          Length = 394

 Score =  181 bits (460), Expect = 3e-43
 Identities = 91/108 (84%), Positives = 95/108 (87%)
 Frame = -2

Query: 378 SRCKLFLSIAGQMTTGSSVYSTSIHHFELYTEGFSVPASSTYTAVEAPKGEFGVFLVSNG 199
           SRC++ LS+            +SIHHFELYTEGFSVPASSTYTAVEAPKGEFGVFLVSNG
Sbjct: 298 SRCRMKLSM-----------ESSIHHFELYTEGFSVPASSTYTAVEAPKGEFGVFLVSNG 346

Query: 198 SNRPYRCKIRAPGFAHLQGLDFMSKHHMLADVVTIIGTQDIVFGEVDR 55
           SNRPYRCKIRAPGFAHLQGLDFMSKHHMLADVVTIIGTQDIVFGEVDR
Sbjct: 347 SNRPYRCKIRAPGFAHLQGLDFMSKHHMLADVVTIIGTQDIVFGEVDR 394


>ref|YP_717100.1| NADH dehydrogenase subunit 7 [Brassica napus]
           gi|37591046|dbj|BAC98848.1| NADH dehydrogenase subunit 7
           [Brassica napus]
          Length = 394

 Score =  179 bits (454), Expect = 1e-42
 Identities = 90/108 (83%), Positives = 94/108 (87%)
 Frame = -2

Query: 378 SRCKLFLSIAGQMTTGSSVYSTSIHHFELYTEGFSVPASSTYTAVEAPKGEFGVFLVSNG 199
           SRC++ LS+            + IHHFELYTEGFSVPASSTYTAVEAPKGEFGVFLVSNG
Sbjct: 298 SRCRMKLSM-----------ESLIHHFELYTEGFSVPASSTYTAVEAPKGEFGVFLVSNG 346

Query: 198 SNRPYRCKIRAPGFAHLQGLDFMSKHHMLADVVTIIGTQDIVFGEVDR 55
           SNRPYRCKIRAPGFAHLQGLDFMSKHHMLADVVTIIGTQDIVFGEVDR
Sbjct: 347 SNRPYRCKIRAPGFAHLQGLDFMSKHHMLADVVTIIGTQDIVFGEVDR 394


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