BLASTX nr result

ID: Glycyrrhiza23_contig00018701 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00018701
         (835 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003548320.1| PREDICTED: pentatricopeptide repeat-containi...   513   e-143
ref|XP_003534115.1| PREDICTED: pentatricopeptide repeat-containi...   510   e-142
ref|XP_002315827.1| predicted protein [Populus trichocarpa] gi|2...   447   e-123
ref|XP_002263624.1| PREDICTED: pentatricopeptide repeat-containi...   424   e-117
emb|CAN70810.1| hypothetical protein VITISV_034914 [Vitis vinifera]   424   e-117

>ref|XP_003548320.1| PREDICTED: pentatricopeptide repeat-containing protein At1g73400,
           mitochondrial-like [Glycine max]
          Length = 466

 Score =  513 bits (1322), Expect = e-143
 Identities = 242/277 (87%), Positives = 262/277 (94%)
 Frame = +3

Query: 3   GIPLSTPLVTGVLHRLRYDEKIAFRFFTWAGHQDNYSHEHCAYNEMMDILSSTKYKVKQF 182
           GIPLSTPLVTGVLHRLRYDEKIA RFFTWAGHQ++YSHE CAYN+MMDILSST+YKVKQF
Sbjct: 18  GIPLSTPLVTGVLHRLRYDEKIALRFFTWAGHQEDYSHEPCAYNDMMDILSSTRYKVKQF 77

Query: 183 RIVCDVLEYMKRNNKNTVPSEVLLTILRKYTEKYLTHVQKFAKKKRIRVKTQPEINAFNL 362
           RIVCDVLEYMKRNNK TVP EVLL ILRKYTEKYLTHVQKFA+K+RIRVKTQPEINAFNL
Sbjct: 78  RIVCDVLEYMKRNNKTTVPVEVLLVILRKYTEKYLTHVQKFARKRRIRVKTQPEINAFNL 137

Query: 363 LLDALCKCCLVEDAEGLYKKMRKTISPNEDTYNILVFGWCRVRNPTRGMKLLEEMIQLGH 542
           LLDALCKCCLVEDAE LYKKMRKT+ PN +TYNI VFGWCRVRNPTRGMKLLEEM++LGH
Sbjct: 138 LLDALCKCCLVEDAETLYKKMRKTVKPNAETYNIFVFGWCRVRNPTRGMKLLEEMVELGH 197

Query: 543 KPDNFTYNTTLDTYCKAGMINEAVDLFEFMRTKGSTISSPTAKSYAIMFVALVQNDRMEE 722
           +PDNF YNT +DTYCKAGM+ EAVDLFEFMRTKGS+ISSPTAK+YAI+ VAL Q+DRMEE
Sbjct: 198 RPDNFAYNTAIDTYCKAGMVTEAVDLFEFMRTKGSSISSPTAKTYAIIIVALAQHDRMEE 257

Query: 723 CFKLMGHMISSGCLPDVTTYKDIIEGMCLWGKIDEAY 833
           CFKL+GHMISSGCLPDVTTYK+IIEGMC+ GKIDEAY
Sbjct: 258 CFKLIGHMISSGCLPDVTTYKEIIEGMCVCGKIDEAY 294



 Score = 78.6 bits (192), Expect = 2e-12
 Identities = 48/165 (29%), Positives = 76/165 (46%), Gaps = 4/165 (2%)
 Frame = +3

Query: 312 KKRIRVKTQPEINAFNLLLDALCKCCLVEDAEGLYKKMR----KTISPNEDTYNILVFGW 479
           ++ + +  +P+  A+N  +D  CK  +V +A  L++ MR       SP   TY I++   
Sbjct: 190 EEMVELGHRPDNFAYNTAIDTYCKAGMVTEAVDLFEFMRTKGSSISSPTAKTYAIIIVAL 249

Query: 480 CRVRNPTRGMKLLEEMIQLGHKPDNFTYNTTLDTYCKAGMINEAVDLFEFMRTKGSTISS 659
            +        KL+  MI  G  PD  TY   ++  C  G I+EA   ++F+   G+    
Sbjct: 250 AQHDRMEECFKLIGHMISSGCLPDVTTYKEIIEGMCVCGKIDEA---YKFLEEMGNKSYR 306

Query: 660 PTAKSYAIMFVALVQNDRMEECFKLMGHMISSGCLPDVTTYKDII 794
           P   +Y      L  N + E+  KL G MI   C+P V TY  +I
Sbjct: 307 PDIVTYNCFLKVLCDNKKSEDALKLYGRMIELNCIPSVQTYNMLI 351


>ref|XP_003534115.1| PREDICTED: pentatricopeptide repeat-containing protein At1g73400,
           mitochondrial-like [Glycine max]
          Length = 466

 Score =  510 bits (1313), Expect = e-142
 Identities = 242/277 (87%), Positives = 261/277 (94%)
 Frame = +3

Query: 3   GIPLSTPLVTGVLHRLRYDEKIAFRFFTWAGHQDNYSHEHCAYNEMMDILSSTKYKVKQF 182
           GIPLSTPLVTG LHRLRYDEKIA RFFTWAGHQ++YSHE CAYN+MMDILSST+YKVKQF
Sbjct: 18  GIPLSTPLVTGGLHRLRYDEKIALRFFTWAGHQEDYSHEPCAYNDMMDILSSTRYKVKQF 77

Query: 183 RIVCDVLEYMKRNNKNTVPSEVLLTILRKYTEKYLTHVQKFAKKKRIRVKTQPEINAFNL 362
           RIVCDVLEYMKRNN+  VP+EVLL ILRKYTEKYLTH+QKFAKKKRIRVKTQ EINAFNL
Sbjct: 78  RIVCDVLEYMKRNNRTMVPAEVLLVILRKYTEKYLTHMQKFAKKKRIRVKTQLEINAFNL 137

Query: 363 LLDALCKCCLVEDAEGLYKKMRKTISPNEDTYNILVFGWCRVRNPTRGMKLLEEMIQLGH 542
           LLDALCKCCLVEDAE LYKKMRKT+ PN +TYNILVFGWCRVRNPTRGMKLLEEMI+LGH
Sbjct: 138 LLDALCKCCLVEDAESLYKKMRKTVKPNAETYNILVFGWCRVRNPTRGMKLLEEMIELGH 197

Query: 543 KPDNFTYNTTLDTYCKAGMINEAVDLFEFMRTKGSTISSPTAKSYAIMFVALVQNDRMEE 722
           +PDNFTYNT +DTYCK GMI EAVDLFEFMRTKGSTISSPTAK+YAI+ VAL Q+DRME+
Sbjct: 198 RPDNFTYNTAIDTYCKTGMITEAVDLFEFMRTKGSTISSPTAKTYAIIIVALAQHDRMED 257

Query: 723 CFKLMGHMISSGCLPDVTTYKDIIEGMCLWGKIDEAY 833
           CFKL+GHMISSGCLPDVTTYK+IIEGMC+ GKIDEAY
Sbjct: 258 CFKLIGHMISSGCLPDVTTYKEIIEGMCMCGKIDEAY 294



 Score = 76.6 bits (187), Expect = 6e-12
 Identities = 49/165 (29%), Positives = 77/165 (46%), Gaps = 4/165 (2%)
 Frame = +3

Query: 312 KKRIRVKTQPEINAFNLLLDALCKCCLVEDAEGLYKKMR---KTIS-PNEDTYNILVFGW 479
           ++ I +  +P+   +N  +D  CK  ++ +A  L++ MR    TIS P   TY I++   
Sbjct: 190 EEMIELGHRPDNFTYNTAIDTYCKTGMITEAVDLFEFMRTKGSTISSPTAKTYAIIIVAL 249

Query: 480 CRVRNPTRGMKLLEEMIQLGHKPDNFTYNTTLDTYCKAGMINEAVDLFEFMRTKGSTISS 659
            +        KL+  MI  G  PD  TY   ++  C  G I+EA   ++F+   G+    
Sbjct: 250 AQHDRMEDCFKLIGHMISSGCLPDVTTYKEIIEGMCMCGKIDEA---YKFLEEMGNKSYR 306

Query: 660 PTAKSYAIMFVALVQNDRMEECFKLMGHMISSGCLPDVTTYKDII 794
           P   +Y      L  N + E+  KL G MI   C+P V TY  +I
Sbjct: 307 PDIVTYNCFLKVLCDNKKSEDALKLYGRMIELNCIPSVQTYNMLI 351


>ref|XP_002315827.1| predicted protein [Populus trichocarpa] gi|222864867|gb|EEF01998.1|
           predicted protein [Populus trichocarpa]
          Length = 472

 Score =  447 bits (1151), Expect = e-123
 Identities = 208/277 (75%), Positives = 245/277 (88%)
 Frame = +3

Query: 3   GIPLSTPLVTGVLHRLRYDEKIAFRFFTWAGHQDNYSHEHCAYNEMMDILSSTKYKVKQF 182
           G+ L+T LV  VL RL ++EK +FRFF WAGHQ NYSHE CAYNEM+DIL+STKYK +QF
Sbjct: 24  GLELTTDLVLNVLGRLHFEEKTSFRFFMWAGHQKNYSHEPCAYNEMIDILTSTKYKARQF 83

Query: 183 RIVCDVLEYMKRNNKNTVPSEVLLTILRKYTEKYLTHVQKFAKKKRIRVKTQPEINAFNL 362
           RIVCD+L+YMKRNNKN VP EVLLTILR YTEKYLT VQKFAKKKRIRVKTQPEINAFNL
Sbjct: 84  RIVCDMLDYMKRNNKNVVPVEVLLTILRNYTEKYLTRVQKFAKKKRIRVKTQPEINAFNL 143

Query: 363 LLDALCKCCLVEDAEGLYKKMRKTISPNEDTYNILVFGWCRVRNPTRGMKLLEEMIQLGH 542
           LLDALCKCCL EDAEGL+K+++  + P+ +TYN++ FGWCRVRNPTRGMK+LEEMIQLGH
Sbjct: 144 LLDALCKCCLAEDAEGLFKRVKNKVKPDANTYNVMFFGWCRVRNPTRGMKVLEEMIQLGH 203

Query: 543 KPDNFTYNTTLDTYCKAGMINEAVDLFEFMRTKGSTISSPTAKSYAIMFVALVQNDRMEE 722
            PD+FTY T +D +C+AGM+NEA +LFEFMRTKGST+SSPTAK+YAIM  ALV+N+RM+E
Sbjct: 204 TPDSFTYITAIDAFCRAGMVNEAAELFEFMRTKGSTMSSPTAKTYAIMIGALVRNNRMDE 263

Query: 723 CFKLMGHMISSGCLPDVTTYKDIIEGMCLWGKIDEAY 833
           CFKL+  MI+SGCLPDV+T+K++IEGMC  GKIDEAY
Sbjct: 264 CFKLLEDMINSGCLPDVSTFKELIEGMCSAGKIDEAY 300


>ref|XP_002263624.1| PREDICTED: pentatricopeptide repeat-containing protein At1g73400,
            mitochondrial-like [Vitis vinifera]
          Length = 709

 Score =  424 bits (1091), Expect = e-117
 Identities = 196/277 (70%), Positives = 243/277 (87%)
 Frame = +3

Query: 3    GIPLSTPLVTGVLHRLRYDEKIAFRFFTWAGHQDNYSHEHCAYNEMMDILSSTKYKVKQF 182
            G+ L+T LV  +L ++ ++EK+AFRFF WAGHQD YSHE  AYNEM+DILSSTKYKVKQF
Sbjct: 261  GVELTTDLVIEILGKIHFEEKMAFRFFMWAGHQDCYSHEPRAYNEMIDILSSTKYKVKQF 320

Query: 183  RIVCDVLEYMKRNNKNTVPSEVLLTILRKYTEKYLTHVQKFAKKKRIRVKTQPEINAFNL 362
            RIVCD+L+YMKRN+K +VP EVLL ILRKYTEK+L H+ KFAKKK+IRVKTQPEINA NL
Sbjct: 321  RIVCDMLDYMKRNDKKSVPVEVLLMILRKYTEKHLAHLHKFAKKKKIRVKTQPEINALNL 380

Query: 363  LLDALCKCCLVEDAEGLYKKMRKTISPNEDTYNILVFGWCRVRNPTRGMKLLEEMIQLGH 542
            LLDALCKC LVEDA+ ++++++  + P+ +TYNIL FGWCRVRNP+RGM++LEEMI++GH
Sbjct: 381  LLDALCKCSLVEDAQAMFRRVKNKVKPDANTYNILFFGWCRVRNPSRGMRVLEEMIEMGH 440

Query: 543  KPDNFTYNTTLDTYCKAGMINEAVDLFEFMRTKGSTISSPTAKSYAIMFVALVQNDRMEE 722
             PD+FTYNT +D++CKAGM+ EA +LFEFMRTKGST+SSPTAK+YAIM +ALVQ+DR EE
Sbjct: 441  TPDSFTYNTAIDSFCKAGMVTEATELFEFMRTKGSTMSSPTAKTYAIMILALVQSDRTEE 500

Query: 723  CFKLMGHMISSGCLPDVTTYKDIIEGMCLWGKIDEAY 833
            CFKL+  MI+SG LPDV+TYK +IEGMCL GK++EAY
Sbjct: 501  CFKLIKDMINSGVLPDVSTYKQVIEGMCLAGKVEEAY 537


>emb|CAN70810.1| hypothetical protein VITISV_034914 [Vitis vinifera]
          Length = 708

 Score =  424 bits (1091), Expect = e-117
 Identities = 196/277 (70%), Positives = 243/277 (87%)
 Frame = +3

Query: 3    GIPLSTPLVTGVLHRLRYDEKIAFRFFTWAGHQDNYSHEHCAYNEMMDILSSTKYKVKQF 182
            G+ L+T LV  +L ++ ++EK+AFRFF WAGHQD YSHE  AYNEM+DILSSTKYKVKQF
Sbjct: 234  GVELTTDLVIEILGKIHFEEKMAFRFFMWAGHQDCYSHEPRAYNEMIDILSSTKYKVKQF 293

Query: 183  RIVCDVLEYMKRNNKNTVPSEVLLTILRKYTEKYLTHVQKFAKKKRIRVKTQPEINAFNL 362
            RIVCD+L+YMKRN+K +VP EVLL ILRKYTEK+L H+ KFAKKK+IRVKTQPEINA NL
Sbjct: 294  RIVCDMLDYMKRNDKKSVPVEVLLMILRKYTEKHLAHLHKFAKKKKIRVKTQPEINALNL 353

Query: 363  LLDALCKCCLVEDAEGLYKKMRKTISPNEDTYNILVFGWCRVRNPTRGMKLLEEMIQLGH 542
            LLDALCKC LVEDA+ ++++++  + P+ +TYNIL FGWCRVRNP+RGM++LEEMI++GH
Sbjct: 354  LLDALCKCSLVEDAQAMFRRVKNKVKPDANTYNILFFGWCRVRNPSRGMRVLEEMIEMGH 413

Query: 543  KPDNFTYNTTLDTYCKAGMINEAVDLFEFMRTKGSTISSPTAKSYAIMFVALVQNDRMEE 722
             PD+FTYNT +D++CKAGM+ EA +LFEFMRTKGST+SSPTAK+YAIM +ALVQ+DR EE
Sbjct: 414  TPDSFTYNTAIDSFCKAGMVTEATELFEFMRTKGSTMSSPTAKTYAIMILALVQSDRTEE 473

Query: 723  CFKLMGHMISSGCLPDVTTYKDIIEGMCLWGKIDEAY 833
            CFKL+  MI+SG LPDV+TYK +IEGMCL GK++EAY
Sbjct: 474  CFKLIKDMINSGVLPDVSTYKQVIEGMCLAGKVEEAY 510


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