BLASTX nr result

ID: Glycyrrhiza23_contig00018694 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00018694
         (390 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003543556.1| PREDICTED: DNA topoisomerase 6 subunit B-lik...   112   4e-23
ref|XP_003543555.1| PREDICTED: DNA topoisomerase 6 subunit B-lik...   112   4e-23
ref|XP_003597480.1| DNA topoisomerase 6 subunit B [Medicago trun...   110   1e-22
ref|XP_004142138.1| PREDICTED: DNA topoisomerase 6 subunit B-lik...   110   2e-22
ref|XP_002283111.2| PREDICTED: DNA topoisomerase 6 subunit B [Vi...   108   6e-22

>ref|XP_003543556.1| PREDICTED: DNA topoisomerase 6 subunit B-like isoform 2 [Glycine
           max]
          Length = 656

 Score =  112 bits (279), Expect = 4e-23
 Identities = 56/57 (98%), Positives = 57/57 (100%)
 Frame = +1

Query: 220 ILKQKSPAEFFAENKNIAGFDNPGKSLYTTVRELVENSLDSAESISELPVIEITIEE 390
           ILKQKSPAEFFAENKNIAGFDNPGKSLYTTVRELVENSLDSAESISELPV+EITIEE
Sbjct: 28  ILKQKSPAEFFAENKNIAGFDNPGKSLYTTVRELVENSLDSAESISELPVVEITIEE 84


>ref|XP_003543555.1| PREDICTED: DNA topoisomerase 6 subunit B-like isoform 1 [Glycine
           max]
          Length = 673

 Score =  112 bits (279), Expect = 4e-23
 Identities = 56/57 (98%), Positives = 57/57 (100%)
 Frame = +1

Query: 220 ILKQKSPAEFFAENKNIAGFDNPGKSLYTTVRELVENSLDSAESISELPVIEITIEE 390
           ILKQKSPAEFFAENKNIAGFDNPGKSLYTTVRELVENSLDSAESISELPV+EITIEE
Sbjct: 28  ILKQKSPAEFFAENKNIAGFDNPGKSLYTTVRELVENSLDSAESISELPVVEITIEE 84


>ref|XP_003597480.1| DNA topoisomerase 6 subunit B [Medicago truncatula]
           gi|355486528|gb|AES67731.1| DNA topoisomerase 6 subunit
           B [Medicago truncatula]
          Length = 671

 Score =  110 bits (275), Expect = 1e-22
 Identities = 54/57 (94%), Positives = 57/57 (100%)
 Frame = +1

Query: 220 ILKQKSPAEFFAENKNIAGFDNPGKSLYTTVRELVENSLDSAESISELPVIEITIEE 390
           +LKQKSPAEFFAENKNIAGFDNPGKSLYTTVRELVEN+LDSAESISELPV+EITIEE
Sbjct: 26  VLKQKSPAEFFAENKNIAGFDNPGKSLYTTVRELVENALDSAESISELPVVEITIEE 82


>ref|XP_004142138.1| PREDICTED: DNA topoisomerase 6 subunit B-like [Cucumis sativus]
           gi|449525918|ref|XP_004169963.1| PREDICTED: DNA
           topoisomerase 6 subunit B-like [Cucumis sativus]
          Length = 696

 Score =  110 bits (274), Expect = 2e-22
 Identities = 55/57 (96%), Positives = 56/57 (98%)
 Frame = +1

Query: 220 ILKQKSPAEFFAENKNIAGFDNPGKSLYTTVRELVENSLDSAESISELPVIEITIEE 390
           ILKQKSPAEFFAENKNIAGFDNPGK LYTTVRELVENSLDSAESISELPV+EITIEE
Sbjct: 28  ILKQKSPAEFFAENKNIAGFDNPGKCLYTTVRELVENSLDSAESISELPVVEITIEE 84


>ref|XP_002283111.2| PREDICTED: DNA topoisomerase 6 subunit B [Vitis vinifera]
          Length = 656

 Score =  108 bits (269), Expect = 6e-22
 Identities = 54/56 (96%), Positives = 55/56 (98%)
 Frame = +1

Query: 223 LKQKSPAEFFAENKNIAGFDNPGKSLYTTVRELVENSLDSAESISELPVIEITIEE 390
           LKQKSPAEFFAENKNIAGFDNPGKSLYTTVRELVENSLDSAESISELP +EITIEE
Sbjct: 29  LKQKSPAEFFAENKNIAGFDNPGKSLYTTVRELVENSLDSAESISELPEVEITIEE 84


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