BLASTX nr result

ID: Glycyrrhiza23_contig00018690 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00018690
         (392 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003531470.1| PREDICTED: protein SOMBRERO-like [Glycine max]    135   4e-30
ref|XP_003546845.1| PREDICTED: protein SOMBRERO-like [Glycine max]    128   5e-28
ref|XP_003595868.1| NAC domain-containing protein [Medicago trun...   128   5e-28
gb|AFK34968.1| unknown [Medicago truncatula]                          124   1e-26
ref|XP_002269543.1| PREDICTED: protein SOMBRERO [Vitis vinifera]       85   7e-15

>ref|XP_003531470.1| PREDICTED: protein SOMBRERO-like [Glycine max]
          Length = 328

 Score =  135 bits (339), Expect = 4e-30
 Identities = 88/128 (68%), Positives = 94/128 (73%), Gaps = 5/128 (3%)
 Frame = -3

Query: 390 ESTIAP---TSLASSMNAMDILECSQNLLRLTTTTTGCSGLNLM-QHQQQGERFNGGGDW 223
           ES +AP   +SLASSMNAMDIL+CSQNLLRL TTTTGC GLNLM Q QQQGERF+  GDW
Sbjct: 219 ESAVAPPTNSSLASSMNAMDILQCSQNLLRL-TTTTGC-GLNLMQQQQQQGERFS--GDW 274

Query: 222 SFLDKLLASXXXXXXXXXXXHSQSKCNNNPTTHHHQHDAASVGTSSAQKFPFHYLGCE-A 46
           SFLDKLLAS             QSKC  NP TH   H  ASVGT SAQKFPFHYLGC+  
Sbjct: 275 SFLDKLLAS--------HHGMDQSKC--NPPTH---HQGASVGT-SAQKFPFHYLGCDTT 320

Query: 45  NDIMKFSK 22
           +DIMKFSK
Sbjct: 321 HDIMKFSK 328


>ref|XP_003546845.1| PREDICTED: protein SOMBRERO-like [Glycine max]
          Length = 326

 Score =  128 bits (321), Expect = 5e-28
 Identities = 86/127 (67%), Positives = 92/127 (72%), Gaps = 4/127 (3%)
 Frame = -3

Query: 390 ESTIAP---TSLASSMNAMDILECSQNLLRLTTTTTGCSGLNLMQHQQQGERFNGGGDWS 220
           ES IAP   +SLA SMNAMDILECSQNLLRL  TTTGC GLNLMQ QQQ ERF+  GDWS
Sbjct: 219 ESAIAPPTNSSLALSMNAMDILECSQNLLRL--TTTGC-GLNLMQ-QQQEERFS--GDWS 272

Query: 219 FLDKLLASXXXXXXXXXXXHSQSKCNNNPTTHHHQHDAASVGTSSAQKFPFHYLGCE-AN 43
           FLDKLLAS             QSKC  NP T+HH   A +VGT SAQKFPFHYLGC+  +
Sbjct: 273 FLDKLLAS--------HHGMDQSKC--NPPTNHHA--ATAVGT-SAQKFPFHYLGCDTTH 319

Query: 42  DIMKFSK 22
           DIMKFSK
Sbjct: 320 DIMKFSK 326


>ref|XP_003595868.1| NAC domain-containing protein [Medicago truncatula]
           gi|124360182|gb|ABN08195.1| No apical meristem (NAM)
           protein [Medicago truncatula]
           gi|355484916|gb|AES66119.1| NAC domain-containing
           protein [Medicago truncatula]
          Length = 344

 Score =  128 bits (321), Expect = 5e-28
 Identities = 75/124 (60%), Positives = 84/124 (67%), Gaps = 1/124 (0%)
 Frame = -3

Query: 390 ESTIAPTSLASSMNAMDILECSQNLLRLTTTTTGCSGLNLMQHQQQ-GERFNGGGDWSFL 214
           ES IA    +   ++MDILECSQNLLRLTTT T  SGLNLMQ QQQ GER   G DWSFL
Sbjct: 229 ESAIAAPPTSFHNSSMDILECSQNLLRLTTTNTS-SGLNLMQQQQQQGERLISGSDWSFL 287

Query: 213 DKLLASXXXXXXXXXXXHSQSKCNNNPTTHHHQHDAASVGTSSAQKFPFHYLGCEANDIM 34
           DKLLAS                CN   T ++HQ   ++VGTSSAQKFPFHYLGCE++DIM
Sbjct: 288 DKLLAS----HNGMDLNLRNKLCN---TPNNHQAAPSAVGTSSAQKFPFHYLGCESHDIM 340

Query: 33  KFSK 22
           KFSK
Sbjct: 341 KFSK 344


>gb|AFK34968.1| unknown [Medicago truncatula]
          Length = 144

 Score =  124 bits (310), Expect = 1e-26
 Identities = 71/123 (57%), Positives = 80/123 (65%)
 Frame = -3

Query: 390 ESTIAPTSLASSMNAMDILECSQNLLRLTTTTTGCSGLNLMQHQQQGERFNGGGDWSFLD 211
           ES IA    +   ++MDILECSQNLLRLTTT T  SGLN +Q QQQGER   G DWSFLD
Sbjct: 30  ESAIAAPPTSFHNSSMDILECSQNLLRLTTTNTS-SGLNFIQQQQQGERLISGSDWSFLD 88

Query: 210 KLLASXXXXXXXXXXXHSQSKCNNNPTTHHHQHDAASVGTSSAQKFPFHYLGCEANDIMK 31
           KLLAS                CN   T ++HQ    +VGT  AQKFPFHYLGCE++DIMK
Sbjct: 89  KLLASHNGMDFNLR----NKLCN---TPNNHQAAPFAVGTFFAQKFPFHYLGCESHDIMK 141

Query: 30  FSK 22
           FSK
Sbjct: 142 FSK 144


>ref|XP_002269543.1| PREDICTED: protein SOMBRERO [Vitis vinifera]
          Length = 312

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 63/124 (50%), Positives = 74/124 (59%), Gaps = 1/124 (0%)
 Frame = -3

Query: 390 ESTIAPTSLAS-SMNAMDILECSQNLLRLTTTTTGCSGLNLMQHQQQGERFNGGGDWSFL 214
           ES + P+ ++  S+N MDI ECSQNLLRLT+T  GC  +       Q ER NG  DWSFL
Sbjct: 214 ESAVPPSFISPLSLNTMDI-ECSQNLLRLTST--GCGLI-------QQERMNG--DWSFL 261

Query: 213 DKLLASXXXXXXXXXXXHSQSKCNNNPTTHHHQHDAASVGTSSAQKFPFHYLGCEANDIM 34
           DKLLAS            SQ+KC+ +     H      VGTS AQKFPF YLGCE  DI+
Sbjct: 262 DKLLASHQSLDQH-----SQTKCHPSSQVVDH------VGTS-AQKFPFQYLGCE-TDIL 308

Query: 33  KFSK 22
           KFSK
Sbjct: 309 KFSK 312


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