BLASTX nr result

ID: Glycyrrhiza23_contig00018684 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00018684
         (249 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003617307.1| Glycoside hydrolase family 28 protein [Medic...   133   1e-29
ref|XP_003545367.1| PREDICTED: probable polygalacturonase-like [...   131   6e-29
gb|ACU23264.1| unknown [Glycine max]                                  131   6e-29
ref|XP_003530711.1| PREDICTED: probable polygalacturonase-like [...   125   5e-27
ref|XP_003551949.1| PREDICTED: probable polygalacturonase-like [...   124   6e-27

>ref|XP_003617307.1| Glycoside hydrolase family 28 protein [Medicago truncatula]
           gi|355518642|gb|AET00266.1| Glycoside hydrolase family
           28 protein [Medicago truncatula]
          Length = 450

 Score =  133 bits (335), Expect = 1e-29
 Identities = 69/88 (78%), Positives = 73/88 (82%), Gaps = 5/88 (5%)
 Frame = +1

Query: 1   CW----SEGGEVVTTTCSNIVPVRDRTDKISLTDFGGVGDGFTLNTKAFREAVYRIQRL- 165
           CW    SE  EV+T  CSNIVP++ RTD ISLTDFGGVGDG TLNTKAFREA+YRI  L 
Sbjct: 17  CWVCVLSENNEVIT--CSNIVPLKYRTDNISLTDFGGVGDGHTLNTKAFREAIYRINHLS 74

Query: 166 PREGGTTLYVPPGVYLTEPFNLTSHMTL 249
            REGGTTLYVPPGVYLTEPFNLTSHMTL
Sbjct: 75  QREGGTTLYVPPGVYLTEPFNLTSHMTL 102


>ref|XP_003545367.1| PREDICTED: probable polygalacturonase-like [Glycine max]
          Length = 446

 Score =  131 bits (329), Expect = 6e-29
 Identities = 62/78 (79%), Positives = 68/78 (87%)
 Frame = +1

Query: 16  GEVVTTTCSNIVPVRDRTDKISLTDFGGVGDGFTLNTKAFREAVYRIQRLPREGGTTLYV 195
           GE  T +CSNIV +  RTD IS+T+FGGVGDG TLNTKAFREA+YR+Q LPREGGT LYV
Sbjct: 23  GEGETASCSNIVALGHRTDNISITEFGGVGDGRTLNTKAFREAIYRVQHLPREGGTLLYV 82

Query: 196 PPGVYLTEPFNLTSHMTL 249
           PPGVYLTEPFNLTSHMTL
Sbjct: 83  PPGVYLTEPFNLTSHMTL 100


>gb|ACU23264.1| unknown [Glycine max]
          Length = 126

 Score =  131 bits (329), Expect = 6e-29
 Identities = 62/78 (79%), Positives = 68/78 (87%)
 Frame = +1

Query: 16  GEVVTTTCSNIVPVRDRTDKISLTDFGGVGDGFTLNTKAFREAVYRIQRLPREGGTTLYV 195
           GE  T +CSNIV +  RTD IS+T+FGGVGDG TLNTKAFREA+YR+Q LPREGGT LYV
Sbjct: 23  GEGETASCSNIVALGHRTDNISITEFGGVGDGRTLNTKAFREAIYRVQHLPREGGTLLYV 82

Query: 196 PPGVYLTEPFNLTSHMTL 249
           PPGVYLTEPFNLTSHMTL
Sbjct: 83  PPGVYLTEPFNLTSHMTL 100


>ref|XP_003530711.1| PREDICTED: probable polygalacturonase-like [Glycine max]
          Length = 474

 Score =  125 bits (313), Expect = 5e-27
 Identities = 61/74 (82%), Positives = 65/74 (87%)
 Frame = +1

Query: 28  TTTCSNIVPVRDRTDKISLTDFGGVGDGFTLNTKAFREAVYRIQRLPREGGTTLYVPPGV 207
           TTTCSNIV +R R+D+IS+TDFGGVGDG TLNTKAFR AVYRIQ L R GGT LYVPPGV
Sbjct: 57  TTTCSNIVSLRYRSDRISVTDFGGVGDGRTLNTKAFRAAVYRIQHLRRRGGTVLYVPPGV 116

Query: 208 YLTEPFNLTSHMTL 249
           YLTE FNLTSHMTL
Sbjct: 117 YLTESFNLTSHMTL 130


>ref|XP_003551949.1| PREDICTED: probable polygalacturonase-like [Glycine max]
          Length = 442

 Score =  124 bits (312), Expect = 6e-27
 Identities = 60/72 (83%), Positives = 64/72 (88%)
 Frame = +1

Query: 34  TCSNIVPVRDRTDKISLTDFGGVGDGFTLNTKAFREAVYRIQRLPREGGTTLYVPPGVYL 213
           TCSNIVP+R R+D+IS+TDFGGVGDG TLNTKAFR AVYRIQ L R GGT LYVPPGVYL
Sbjct: 27  TCSNIVPLRYRSDRISITDFGGVGDGRTLNTKAFRAAVYRIQHLRRRGGTVLYVPPGVYL 86

Query: 214 TEPFNLTSHMTL 249
           TE FNLTSHMTL
Sbjct: 87  TESFNLTSHMTL 98


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