BLASTX nr result

ID: Glycyrrhiza23_contig00018677 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00018677
         (915 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK47808.1| unknown [Medicago truncatula]                          323   3e-86
ref|XP_003609082.1| Single-stranded DNA-binding protein [Medicag...   323   3e-86
ref|XP_003609115.1| Single-stranded DNA-binding protein [Medicag...   318   1e-84
ref|XP_003524509.1| PREDICTED: single-stranded DNA-binding prote...   278   2e-72
ref|XP_002317924.1| predicted protein [Populus trichocarpa] gi|2...   252   7e-65

>gb|AFK47808.1| unknown [Medicago truncatula]
          Length = 239

 Score =  323 bits (828), Expect = 3e-86
 Identities = 168/220 (76%), Positives = 182/220 (82%), Gaps = 9/220 (4%)
 Frame = -1

Query: 825 MRSSISMGTLS----RTLYRSFLSTPKPYPQHL--LPLRF--STNILSDSDEADSPTP-P 673
           M+ SI M   S     TLYRS LSTP P   H   +PLRF  +T  LSD D+ADS  P P
Sbjct: 20  MQKSIGMAKFSISRTSTLYRSLLSTPPPPLHHHRHIPLRFCTTTTSLSDYDDADSAAPSP 79

Query: 672 SPSQTERVIFDRPLENGLDVGIYRAILVGKVGQKPLQKKLRSGTVVTLLSLGTGGIRNNR 493
           SP QTER  FDRPLENGLD G+YRAILVGK GQKPLQKKL+SGTVVTLLS+GTGGIRNNR
Sbjct: 80  SPEQTERTFFDRPLENGLDPGVYRAILVGKAGQKPLQKKLKSGTVVTLLSIGTGGIRNNR 139

Query: 492 RPLDHENPRDYANRCSVQWHRVSVYPERLGTLLMNRVLPGSTLYVEGNLETKVFSDPVTG 313
           RPLDHENPR+YANRC+VQWHRV+VYPERLG LLM  VLPGSTLYVEGNLETKVFSDPVTG
Sbjct: 140 RPLDHENPREYANRCAVQWHRVTVYPERLGNLLMKTVLPGSTLYVEGNLETKVFSDPVTG 199

Query: 312 LVRRIREVAVRRNGRVVFLSQGDDAEQQTQPNELRSVGYY 193
           LVRR+REVAVRRNGRVVFL  GDD +QQTQ N+LR+VGYY
Sbjct: 200 LVRRVREVAVRRNGRVVFLGPGDDPKQQTQQNDLRAVGYY 239


>ref|XP_003609082.1| Single-stranded DNA-binding protein [Medicago truncatula]
           gi|355510137|gb|AES91279.1| Single-stranded DNA-binding
           protein [Medicago truncatula]
          Length = 239

 Score =  323 bits (828), Expect = 3e-86
 Identities = 168/220 (76%), Positives = 182/220 (82%), Gaps = 9/220 (4%)
 Frame = -1

Query: 825 MRSSISMGTLS----RTLYRSFLSTPKPYPQHL--LPLRF--STNILSDSDEADSPTP-P 673
           M+ SI M   S     TLYRS LSTP P   H   +PLRF  +T  LSD D+ADS  P P
Sbjct: 20  MQKSIGMAKFSISRTSTLYRSLLSTPPPPLHHHRHIPLRFCTTTTSLSDYDDADSAAPSP 79

Query: 672 SPSQTERVIFDRPLENGLDVGIYRAILVGKVGQKPLQKKLRSGTVVTLLSLGTGGIRNNR 493
           SP QTER  FDRPLENGLD G+YRAILVGK GQKPLQKKL+SGTVVTLLS+GTGGIRNNR
Sbjct: 80  SPEQTERTFFDRPLENGLDPGVYRAILVGKAGQKPLQKKLKSGTVVTLLSIGTGGIRNNR 139

Query: 492 RPLDHENPRDYANRCSVQWHRVSVYPERLGTLLMNRVLPGSTLYVEGNLETKVFSDPVTG 313
           RPLDHENPR+YANRC+VQWHRV+VYPERLG LLM  VLPGSTLYVEGNLETKVFSDPVTG
Sbjct: 140 RPLDHENPREYANRCAVQWHRVTVYPERLGNLLMKTVLPGSTLYVEGNLETKVFSDPVTG 199

Query: 312 LVRRIREVAVRRNGRVVFLSQGDDAEQQTQPNELRSVGYY 193
           LVRR+REVAVRRNGRVVFL  GDD +QQTQ N+LR+VGYY
Sbjct: 200 LVRRVREVAVRRNGRVVFLGPGDDPKQQTQQNDLRAVGYY 239


>ref|XP_003609115.1| Single-stranded DNA-binding protein [Medicago truncatula]
           gi|355510170|gb|AES91312.1| Single-stranded DNA-binding
           protein [Medicago truncatula]
          Length = 253

 Score =  318 bits (814), Expect = 1e-84
 Identities = 166/218 (76%), Positives = 180/218 (82%), Gaps = 9/218 (4%)
 Frame = -1

Query: 825 MRSSISMGTLS----RTLYRSFLSTPKPYPQHL--LPLRF--STNILSDSDEADSPTP-P 673
           M+ SI M   S     TLYRS LSTP P   H   +PLRF  +T  LSD D+ADS  P P
Sbjct: 20  MQKSIGMAKFSISRTSTLYRSLLSTPPPPLHHHRHIPLRFCTTTTSLSDYDDADSAAPSP 79

Query: 672 SPSQTERVIFDRPLENGLDVGIYRAILVGKVGQKPLQKKLRSGTVVTLLSLGTGGIRNNR 493
           SP QTER  FDRPLENGLD G+YRAILVGK GQKPLQKKL+SGTVVTLLS+GTGGIRNNR
Sbjct: 80  SPEQTERTFFDRPLENGLDPGVYRAILVGKAGQKPLQKKLKSGTVVTLLSIGTGGIRNNR 139

Query: 492 RPLDHENPRDYANRCSVQWHRVSVYPERLGTLLMNRVLPGSTLYVEGNLETKVFSDPVTG 313
           RPLDHENPR+YANRC+VQWHRV+VYPERLG LLM  VLPGSTLYVEGNLETKVFSDPVTG
Sbjct: 140 RPLDHENPREYANRCAVQWHRVTVYPERLGNLLMKTVLPGSTLYVEGNLETKVFSDPVTG 199

Query: 312 LVRRIREVAVRRNGRVVFLSQGDDAEQQTQPNELRSVG 199
           LVRR+REVAVRRNGRVVFL  GDD +QQTQ N+LR+VG
Sbjct: 200 LVRRVREVAVRRNGRVVFLGPGDDPKQQTQQNDLRAVG 237


>ref|XP_003524509.1| PREDICTED: single-stranded DNA-binding protein, mitochondrial-like
           [Glycine max]
          Length = 207

 Score =  278 bits (710), Expect = 2e-72
 Identities = 143/212 (67%), Positives = 165/212 (77%), Gaps = 4/212 (1%)
 Frame = -1

Query: 816 SISMGTLSRTLYRSFLSTPKPYPQHLLPLRFSTNILSDSDEADS-PTPPSPS---QTERV 649
           S SM TLSR LY S L TP  Y        FST+ L DSDEADS P PP+P    + E+ 
Sbjct: 2   SSSMMTLSRRLYCSLLRTPNAYRH------FSTDHLFDSDEADSAPDPPAPDAVQEEEKF 55

Query: 648 IFDRPLENGLDVGIYRAILVGKVGQKPLQKKLRSGTVVTLLSLGTGGIRNNRRPLDHENP 469
           + DRPLENGLDVGIYRAILVGK GQ PLQKKL+SGT VTLLS+GTGGI NNRRP   ENP
Sbjct: 56  VIDRPLENGLDVGIYRAILVGKAGQAPLQKKLKSGTSVTLLSVGTGGIHNNRRPRVDENP 115

Query: 468 RDYANRCSVQWHRVSVYPERLGTLLMNRVLPGSTLYVEGNLETKVFSDPVTGLVRRIREV 289
           +DYANR ++QWHRVSVYP++LG L+   V+PGS LYVEGNLETK F+DP+TG+ RRIRE+
Sbjct: 116 KDYANRSAIQWHRVSVYPQKLGDLVTKHVVPGSMLYVEGNLETKCFTDPITGIARRIREI 175

Query: 288 AVRRNGRVVFLSQGDDAEQQTQPNELRSVGYY 193
           AVRRNGR+VFL +G DAE QT P +LR+VGYY
Sbjct: 176 AVRRNGRIVFLGEGGDAELQTLPKDLRAVGYY 207


>ref|XP_002317924.1| predicted protein [Populus trichocarpa] gi|222858597|gb|EEE96144.1|
           predicted protein [Populus trichocarpa]
          Length = 220

 Score =  252 bits (644), Expect = 7e-65
 Identities = 135/219 (61%), Positives = 162/219 (73%), Gaps = 13/219 (5%)
 Frame = -1

Query: 810 SMGTLSRTLYRSFLSTPKPYPQHLLPLRFS---------TNILSDSDEADSP----TPPS 670
           SM  LSR LYRS LS+     Q  +P   S         TN LS  +E DSP    T   
Sbjct: 4   SMAVLSRRLYRSLLSSNPKISQLSMPFCTSSSTTTTTTTTNNLSFREE-DSPSSSTTTSE 62

Query: 669 PSQTERVIFDRPLENGLDVGIYRAILVGKVGQKPLQKKLRSGTVVTLLSLGTGGIRNNRR 490
            S   R++ DRPLENGLD G+Y+AILVG+VGQ PLQKKLRSG  +T+ S+GTGGIRNNRR
Sbjct: 63  GSSGSRMVQDRPLENGLDAGVYKAILVGQVGQNPLQKKLRSGREITIFSMGTGGIRNNRR 122

Query: 489 PLDHENPRDYANRCSVQWHRVSVYPERLGTLLMNRVLPGSTLYVEGNLETKVFSDPVTGL 310
           PL +E+PR+YANRC+VQWHRVSVYPERLG ++M  VLPGS LYVEGNLETKVF+DP+TGL
Sbjct: 123 PLQNEDPREYANRCAVQWHRVSVYPERLGRVVMQNVLPGSILYVEGNLETKVFTDPITGL 182

Query: 309 VRRIREVAVRRNGRVVFLSQGDDAEQQTQPNELRSVGYY 193
           VRRIRE+AVR+NGR+VFL +G + +QQ    EL+ +GYY
Sbjct: 183 VRRIREIAVRQNGRLVFLGKGAN-DQQASSLELKGLGYY 220


Top