BLASTX nr result

ID: Glycyrrhiza23_contig00018671 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00018671
         (352 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003550208.1| PREDICTED: U-box domain-containing protein 7...   101   6e-20
ref|XP_003544595.1| PREDICTED: U-box domain-containing protein 6...   101   6e-20
ref|XP_002308701.1| predicted protein [Populus trichocarpa] gi|2...   101   6e-20
gb|ABK93936.1| unknown [Populus trichocarpa]                          101   6e-20
ref|XP_002285290.1| PREDICTED: U-box domain-containing protein 4...    97   1e-18

>ref|XP_003550208.1| PREDICTED: U-box domain-containing protein 7-like [Glycine max]
          Length = 503

 Score =  101 bits (252), Expect = 6e-20
 Identities = 61/105 (58%), Positives = 65/105 (61%)
 Frame = +3

Query: 3   DKGKQVSGNYGGNLGATVSAPICGASSSSCAKHDGSGGKXXXXXXXXXXXXXXXXXKKAV 182
           DKGKQVSG+YG  LGA VSAPICG+ S    K DG GG+                 KKAV
Sbjct: 408 DKGKQVSGSYG--LGAAVSAPICGSLSG---KPDGGGGRECFEEDEEMMSEE----KKAV 458

Query: 183 RQLVQQSLQNNMRKIVKRANLPQDIVPSDHFXXXXXXXXXXXXPF 317
           +QLVQQSLQNNMRKIVKRANLP DIVPSDHF            PF
Sbjct: 459 KQLVQQSLQNNMRKIVKRANLPHDIVPSDHFKSLTLSSTSKSLPF 503


>ref|XP_003544595.1| PREDICTED: U-box domain-containing protein 6-like [Glycine max]
          Length = 500

 Score =  101 bits (252), Expect = 6e-20
 Identities = 61/105 (58%), Positives = 65/105 (61%)
 Frame = +3

Query: 3   DKGKQVSGNYGGNLGATVSAPICGASSSSCAKHDGSGGKXXXXXXXXXXXXXXXXXKKAV 182
           DKGKQVSG+YG  LGA VSAPICG+SS   A+ DG GG                  KKAV
Sbjct: 404 DKGKQVSGSYG--LGAAVSAPICGSSS---ARPDGGGG---GRECFEEDEEMMSEEKKAV 455

Query: 183 RQLVQQSLQNNMRKIVKRANLPQDIVPSDHFXXXXXXXXXXXXPF 317
           +QLVQQSLQNNMRKIVKRANLP DI PSDHF            PF
Sbjct: 456 KQLVQQSLQNNMRKIVKRANLPHDIAPSDHFMSLTSSSTSKSLPF 500


>ref|XP_002308701.1| predicted protein [Populus trichocarpa] gi|222854677|gb|EEE92224.1|
           predicted protein [Populus trichocarpa]
          Length = 492

 Score =  101 bits (252), Expect = 6e-20
 Identities = 58/105 (55%), Positives = 62/105 (59%)
 Frame = +3

Query: 3   DKGKQVSGNYGGNLGATVSAPICGASSSSCAKHDGSGGKXXXXXXXXXXXXXXXXXKKAV 182
           DKGKQVSGNYGGN+GA VSAPI G  SSS      S                    KKAV
Sbjct: 394 DKGKQVSGNYGGNMGAAVSAPIYGTPSSS------SNPNLVSKECLEETEDMMSEEKKAV 447

Query: 183 RQLVQQSLQNNMRKIVKRANLPQDIVPSDHFXXXXXXXXXXXXPF 317
           +QLVQQSLQNNMR+IVKRANLPQD VPS+HF            PF
Sbjct: 448 KQLVQQSLQNNMRRIVKRANLPQDFVPSEHFKSLTSSSTSKSLPF 492


>gb|ABK93936.1| unknown [Populus trichocarpa]
          Length = 206

 Score =  101 bits (252), Expect = 6e-20
 Identities = 58/105 (55%), Positives = 62/105 (59%)
 Frame = +3

Query: 3   DKGKQVSGNYGGNLGATVSAPICGASSSSCAKHDGSGGKXXXXXXXXXXXXXXXXXKKAV 182
           DKGKQVSGNYGGN+GA VSAPI G  SSS      S                    KKAV
Sbjct: 108 DKGKQVSGNYGGNMGAAVSAPIYGTPSSS------SNPNLVSKECLEETEDMMSEEKKAV 161

Query: 183 RQLVQQSLQNNMRKIVKRANLPQDIVPSDHFXXXXXXXXXXXXPF 317
           +QLVQQSLQNNMR+IVKRANLPQD VPS+HF            PF
Sbjct: 162 KQLVQQSLQNNMRRIVKRANLPQDFVPSEHFKSLTSSSTSKSLPF 206


>ref|XP_002285290.1| PREDICTED: U-box domain-containing protein 4-like [Vitis vinifera]
          Length = 497

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 58/106 (54%), Positives = 65/106 (61%), Gaps = 1/106 (0%)
 Frame = +3

Query: 3   DKGKQVSGNYGGNLGAT-VSAPICGASSSSCAKHDGSGGKXXXXXXXXXXXXXXXXXKKA 179
           DKGKQVS +YGG+LG+  VSAPICG+SSSS   +  S                    KKA
Sbjct: 398 DKGKQVSESYGGSLGSVGVSAPICGSSSSSADPNLSS------KEAFEEEEDMMSEEKKA 451

Query: 180 VRQLVQQSLQNNMRKIVKRANLPQDIVPSDHFXXXXXXXXXXXXPF 317
           V+QLVQQSLQNNMR+IVKRANLPQD VPSDHF            PF
Sbjct: 452 VKQLVQQSLQNNMRRIVKRANLPQDFVPSDHFKALTSSSTSKSLPF 497


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