BLASTX nr result

ID: Glycyrrhiza23_contig00018663 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00018663
         (319 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003597656.1| DNA repair protein radA-like protein [Medica...    77   1e-12
ref|XP_003546961.1| PREDICTED: DNA repair protein RadA homolog [...    67   2e-09

>ref|XP_003597656.1| DNA repair protein radA-like protein [Medicago truncatula]
           gi|355486704|gb|AES67907.1| DNA repair protein radA-like
           protein [Medicago truncatula]
          Length = 646

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 46/116 (39%), Positives = 54/116 (46%), Gaps = 21/116 (18%)
 Frame = +1

Query: 34  FSSLLSDYSTAATTTETDSPEEPNGRTNHPTGSGWSMYADVVA------QHRLSDDEAEE 195
           FSSLLS   ++ TT E       N +   PT + WSMY +V+A       H   D+  EE
Sbjct: 23  FSSLLSPNPSSTTTPEDTETLHSNEKPQKPTNT-WSMYGNVIATKQKINNHNEDDETKEE 81

Query: 196 KP--SGGGMMLNLXXXXXXXXXXXX-------------QWVCCNCGYEAGQWWGTC 318
           KP  S  G M+NL                         QWVCCNCGY AGQWWGTC
Sbjct: 82  KPTESENGSMMNLKNKTIFKTAATTVTVDKRSTKKVKTQWVCCNCGYTAGQWWGTC 137


>ref|XP_003546961.1| PREDICTED: DNA repair protein RadA homolog [Glycine max]
          Length = 585

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 39/113 (34%), Positives = 57/113 (50%), Gaps = 7/113 (6%)
 Frame = +1

Query: 1   LLHPKCTFSFPFSSLLSDYSTAATTTETDSPEEPNGRTNHPTGSGWSMYADV----VAQH 168
           L +PKC F      LLS +S+ AT + +++ E     T   T + WSMY +V    +AQ 
Sbjct: 17  LRNPKCIFP----PLLSRHSSTATNS-SEAREPAKETTTTTTTTSWSMYGNVYDRPIAQR 71

Query: 169 RLSD-DEAEEKPSGG--GMMLNLXXXXXXXXXXXXQWVCCNCGYEAGQWWGTC 318
            L+D  + +E PS G     + +            QWVCC+CG+  G+WWG C
Sbjct: 72  ELNDHSDGDENPSSGRAAKSVAVVTKIKGKGKVKTQWVCCSCGHSTGKWWGQC 124


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