BLASTX nr result

ID: Glycyrrhiza23_contig00018647 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00018647
         (594 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003543381.1| PREDICTED: RING-H2 finger protein ATL46-like...   117   1e-24
gb|ACI42847.1| RING finger protein [Glycine max]                      117   1e-24
ref|XP_003553922.1| PREDICTED: RING-H2 finger protein ATL46-like...   114   1e-23
ref|XP_004142353.1| PREDICTED: RING-H2 finger protein ATL46-like...    94   2e-17
gb|AFK39256.1| unknown [Lotus japonicus]                               93   3e-17

>ref|XP_003543381.1| PREDICTED: RING-H2 finger protein ATL46-like [Glycine max]
          Length = 410

 Score =  117 bits (294), Expect = 1e-24
 Identities = 64/96 (66%), Positives = 76/96 (79%), Gaps = 3/96 (3%)
 Frame = -1

Query: 594 SMGSYQYVVGDLELRVALNHNKGHHDNTTRLITKGSEHDAEKLSLE-GDMEAKKISNVSK 418
           SMGSYQYVVG+ +LRV LNH++      TRL TKG E D  K+S+E GD+EAKKIS+VSK
Sbjct: 305 SMGSYQYVVGNSDLRVTLNHDEIGKGQVTRL-TKGMELDDGKVSVEEGDVEAKKISSVSK 363

Query: 417 GDSFSISKIWLWPKKGNFSSSLEGQ--RGLPSYLNT 316
           GDSFS+SKIWLWPKKG   +SL+GQ  R +PSYLNT
Sbjct: 364 GDSFSVSKIWLWPKKGKLPTSLDGQFGRPMPSYLNT 399


>gb|ACI42847.1| RING finger protein [Glycine max]
          Length = 392

 Score =  117 bits (294), Expect = 1e-24
 Identities = 64/96 (66%), Positives = 76/96 (79%), Gaps = 3/96 (3%)
 Frame = -1

Query: 594 SMGSYQYVVGDLELRVALNHNKGHHDNTTRLITKGSEHDAEKLSLE-GDMEAKKISNVSK 418
           SMGSYQYVVG+ +LRV LNH++      TRL TKG E D  K+S+E GD+EAKKIS+VSK
Sbjct: 287 SMGSYQYVVGNSDLRVTLNHDEIGKGQVTRL-TKGMELDDGKVSVEEGDVEAKKISSVSK 345

Query: 417 GDSFSISKIWLWPKKGNFSSSLEGQ--RGLPSYLNT 316
           GDSFS+SKIWLWPKKG   +SL+GQ  R +PSYLNT
Sbjct: 346 GDSFSVSKIWLWPKKGKLPTSLDGQFGRPMPSYLNT 381


>ref|XP_003553922.1| PREDICTED: RING-H2 finger protein ATL46-like isoform 1 [Glycine
           max] gi|356571517|ref|XP_003553923.1| PREDICTED: RING-H2
           finger protein ATL46-like isoform 2 [Glycine max]
          Length = 386

 Score =  114 bits (286), Expect = 1e-23
 Identities = 67/108 (62%), Positives = 81/108 (75%), Gaps = 2/108 (1%)
 Frame = -1

Query: 594 SMGSYQYVVGDLELRVALNHNKGHHDNTTRLITKGSEHDAEKLSLEGDMEAKKISNVSKG 415
           SMGSYQYVVG+ +LRVALNH++      TRL  KG E D  KLS+E D+E KKIS+VSKG
Sbjct: 283 SMGSYQYVVGNSDLRVALNHDEISKGQVTRL-NKGMELDDGKLSVE-DVEGKKISSVSKG 340

Query: 414 DSFSISKIWLWPKKGNFSSSLEGQRG--LPSYLNTADLHRGMRRETDG 277
           DSFS+SKIWLWPKKG   +SL+GQ G  +PS+LNT D  R   R+T+G
Sbjct: 341 DSFSVSKIWLWPKKGKLPTSLDGQIGMPMPSFLNT-DFPR--MRDTEG 385


>ref|XP_004142353.1| PREDICTED: RING-H2 finger protein ATL46-like [Cucumis sativus]
           gi|449492685|ref|XP_004159071.1| PREDICTED: RING-H2
           finger protein ATL46-like [Cucumis sativus]
          Length = 375

 Score = 93.6 bits (231), Expect = 2e-17
 Identities = 47/94 (50%), Positives = 66/94 (70%), Gaps = 1/94 (1%)
 Frame = -1

Query: 594 SMGSYQYVVGDLELRVALNHNKGHHDNTTRLITKGSEHDAEKLS-LEGDMEAKKISNVSK 418
           SMGSYQYVV D +LR+AL+  +G  DNT        E ++  +S ++ D++ KK+S+V+K
Sbjct: 274 SMGSYQYVVIDADLRIALSKARGEGDNTQ----PSKEAESNSISPVQADLDGKKLSSVAK 329

Query: 417 GDSFSISKIWLWPKKGNFSSSLEGQRGLPSYLNT 316
           G+S+S+SKIWLW KKG +S S E   G+PS LNT
Sbjct: 330 GESYSVSKIWLWSKKGKYSGSTEPHIGMPSSLNT 363


>gb|AFK39256.1| unknown [Lotus japonicus]
          Length = 99

 Score = 93.2 bits (230), Expect = 3e-17
 Identities = 54/105 (51%), Positives = 73/105 (69%)
 Frame = -1

Query: 591 MGSYQYVVGDLELRVALNHNKGHHDNTTRLITKGSEHDAEKLSLEGDMEAKKISNVSKGD 412
           MGSYQYV+G  +L++ LN+++   D   +   K SE+  EKLS+EGD+EAKKI  V KG+
Sbjct: 1   MGSYQYVLGKSDLQITLNNDRKSCDAKLK---KESEN-LEKLSVEGDIEAKKIRRVGKGE 56

Query: 411 SFSISKIWLWPKKGNFSSSLEGQRGLPSYLNTADLHRGMRRETDG 277
           S+S+SKIWLW +KG FS S +   G+PS LN A+L     RET+G
Sbjct: 57  SYSVSKIWLWSEKGKFSVSSDAGMGMPSSLN-AEL--PWMRETEG 98


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