BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00018643
         (600 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003624935.1| DNA repair protein RAD5 [Medicago truncatula...   273   2e-71
ref|XP_002277489.1| PREDICTED: putative SWI/SNF-related matrix-a...   260   1e-67
ref|XP_002308876.1| chromatin remodeling complex subunit [Populu...   252   4e-65
ref|XP_002871139.1| SNF2 domain-containing protein [Arabidopsis ...   248   4e-64
ref|NP_196132.2| DNA/RNA helicase [Arabidopsis thaliana] gi|2026...   248   7e-64

>ref|XP_003624935.1| DNA repair protein RAD5 [Medicago truncatula]
            gi|124360542|gb|ABN08552.1| SNF2-related; Zinc finger,
            RING-type; ATP-requiring DNA helicase RecQ [Medicago
            truncatula] gi|355499950|gb|AES81153.1| DNA repair
            protein RAD5 [Medicago truncatula]
          Length = 844

 Score =  273 bits (698), Expect = 2e-71
 Identities = 145/223 (65%), Positives = 167/223 (74%), Gaps = 24/223 (10%)
 Frame = +3

Query: 3    QSQAVFKLRAKRRWAVTGTPVLNGSIDLFALMSFLQFEPFSIRCYWHSLVQR--HQGKKR 176
            QSQAV  L AKRRWAVTGTP+ NGS DLF+LM+FL FEPFSI+ YW SLVQR  +QGK+ 
Sbjct: 386  QSQAVIALNAKRRWAVTGTPIQNGSYDLFSLMAFLHFEPFSIKSYWQSLVQRPLNQGKQT 445

Query: 177  GQFRLQALMGAIALRRTKDTAMVGLPPKTVETVYVELSGEERQLYDEVKEEVKALLRDYD 356
            G  RLQ LM AI+LRRTKDTA+ GLPPK VET YVELS EER+LYDEVKEE+K+L+  ++
Sbjct: 446  GMSRLQVLMSAISLRRTKDTALGGLPPKIVETCYVELSFEERKLYDEVKEEIKSLMMHHN 505

Query: 357  NDGSMVYSYSTMLSMILRLRQICTDFTMCPANFKFGLFPSGDIE---------------- 488
            ++  +V SYST+LSMILRLRQIC DF+M P +FK  LF S DIE                
Sbjct: 506  SNDRLVSSYSTVLSMILRLRQICADFSMVPLDFKSCLFSSTDIEGIEMNQSGCIFCYIRK 565

Query: 489  ------DVSKNPELLQTLFRVLQDDEDFDCPICISPPTDIVIT 599
                   VSKNPELLQTL R+LQD EDFDCPIC+SPPTDIVIT
Sbjct: 566  FSFAGNHVSKNPELLQTLIRMLQDGEDFDCPICLSPPTDIVIT 608


>ref|XP_002277489.1| PREDICTED: putative SWI/SNF-related matrix-associated actin-dependent
            regulator of chromatin subfamily A member 3-like 1-like
            [Vitis vinifera]
          Length = 874

 Score =  260 bits (665), Expect = 1e-67
 Identities = 129/201 (64%), Positives = 162/201 (80%), Gaps = 2/201 (0%)
 Frame = +3

Query: 3    QSQAVFKLRAKRRWAVTGTPVLNGSIDLFALMSFLQFEPFSIRCYWHSLVQRH--QGKKR 176
            QSQAV  LRAKRRW VTGTP+ NG+ DLF+LM+FL+FEPFSI+ YW SLVQR   QGK++
Sbjct: 444  QSQAVTNLRAKRRWVVTGTPIQNGTFDLFSLMAFLRFEPFSIKSYWQSLVQRPLGQGKEK 503

Query: 177  GQFRLQALMGAIALRRTKDTAMVGLPPKTVETVYVELSGEERQLYDEVKEEVKALLRDYD 356
            G  RLQ LM  I+LRRTKD  ++GLPPK+VET +VELS EER+LYD+++ E K ++RDY 
Sbjct: 504  GLSRLQVLMATISLRRTKDKGLIGLPPKSVETCFVELSAEERELYDQMEAEGKCVIRDYI 563

Query: 357  NDGSMVYSYSTMLSMILRLRQICTDFTMCPANFKFGLFPSGDIEDVSKNPELLQTLFRVL 536
            + GS++ +YST+L +ILRLRQICTD  +CP++ +  L  S +IEDVS NPELL+ +  VL
Sbjct: 564  DAGSVMRNYSTVLGIILRLRQICTDVALCPSDLR-SLLLSNNIEDVSNNPELLKKMVLVL 622

Query: 537  QDDEDFDCPICISPPTDIVIT 599
            QD EDFDCPICISPPT+IVIT
Sbjct: 623  QDGEDFDCPICISPPTNIVIT 643


>ref|XP_002308876.1| chromatin remodeling complex subunit [Populus trichocarpa]
           gi|222854852|gb|EEE92399.1| chromatin remodeling complex
           subunit [Populus trichocarpa]
          Length = 799

 Score =  252 bits (643), Expect = 4e-65
 Identities = 123/201 (61%), Positives = 157/201 (78%), Gaps = 2/201 (0%)
 Frame = +3

Query: 3   QSQAVFKLRAKRRWAVTGTPVLNGSIDLFALMSFLQFEPFSIRCYWHSLVQRH--QGKKR 176
           QS+AV KL AKRRW VTGTP+ NGS+DLF+LM+FL+FEPFSI+ YW SL+QR   QG K+
Sbjct: 369 QSRAVTKLNAKRRWVVTGTPIQNGSLDLFSLMAFLRFEPFSIKSYWQSLLQRPLAQGNKK 428

Query: 177 GQFRLQALMGAIALRRTKDTAMVGLPPKTVETVYVELSGEERQLYDEVKEEVKALLRDYD 356
           G  RLQ LM  I+LRRTKD  +VGLP KTVET Y+ELSGEER+LYD+++ E K +++++ 
Sbjct: 429 GLSRLQVLMATISLRRTKDKGVVGLPSKTVETHYIELSGEERELYDQMEAEAKGVVQNFI 488

Query: 357 NDGSMVYSYSTMLSMILRLRQICTDFTMCPANFKFGLFPSGDIEDVSKNPELLQTLFRVL 536
           N  +++ ++ST+L +ILRLRQIC D  +CP++ +  L PS  IEDVS NPELL  +  VL
Sbjct: 489 NTNNLMRNFSTVLCIILRLRQICNDLALCPSDLR-SLLPSNSIEDVSNNPELLMKMVTVL 547

Query: 537 QDDEDFDCPICISPPTDIVIT 599
           QD EDFDCPICI PPT+ VIT
Sbjct: 548 QDGEDFDCPICICPPTETVIT 568


>ref|XP_002871139.1| SNF2 domain-containing protein [Arabidopsis lyrata subsp. lyrata]
            gi|297316976|gb|EFH47398.1| SNF2 domain-containing
            protein [Arabidopsis lyrata subsp. lyrata]
          Length = 861

 Score =  248 bits (634), Expect = 4e-64
 Identities = 122/201 (60%), Positives = 156/201 (77%), Gaps = 2/201 (0%)
 Frame = +3

Query: 3    QSQAVFKLRAKRRWAVTGTPVLNGSIDLFALMSFLQFEPFSIRCYWHSLVQRH--QGKKR 176
            QS+ V KL+A RRWAVTGTP+ NGS DL++LM+FL+FEPFSI+ YW SL+QR   QG K+
Sbjct: 429  QSRVVSKLKASRRWAVTGTPIQNGSFDLYSLMAFLRFEPFSIKSYWQSLIQRPLGQGNKK 488

Query: 177  GQFRLQALMGAIALRRTKDTAMVGLPPKTVETVYVELSGEERQLYDEVKEEVKALLRDYD 356
            G  RLQ LM  I+LRRTK+ +++GLPPKTVET YVELS EERQLYD ++ E K ++++  
Sbjct: 489  GLSRLQVLMATISLRRTKEKSLIGLPPKTVETCYVELSPEERQLYDHMEGEAKGVVQNLI 548

Query: 357  NDGSMVYSYSTMLSMILRLRQICTDFTMCPANFKFGLFPSGDIEDVSKNPELLQTLFRVL 536
            N+GS++ +YST+LS+ILRLRQ+C D ++CP   +     S  +EDV   PELLQ L  VL
Sbjct: 549  NNGSLMRNYSTVLSIILRLRQLCDDISLCPPELR-SFTTSTSVEDVIDKPELLQKLIAVL 607

Query: 537  QDDEDFDCPICISPPTDIVIT 599
            QD EDFDCPICISPPT+I+IT
Sbjct: 608  QDGEDFDCPICISPPTNIIIT 628


>ref|NP_196132.2| DNA/RNA helicase [Arabidopsis thaliana] gi|20260624|gb|AAM13210.1|
            helicase-like transcription factor-like protein
            [Arabidopsis thaliana] gi|31711770|gb|AAP68241.1|
            At5g05130 [Arabidopsis thaliana]
            gi|332003449|gb|AED90832.1| DNA/RNA helicase [Arabidopsis
            thaliana]
          Length = 862

 Score =  248 bits (632), Expect = 7e-64
 Identities = 121/201 (60%), Positives = 156/201 (77%), Gaps = 2/201 (0%)
 Frame = +3

Query: 3    QSQAVFKLRAKRRWAVTGTPVLNGSIDLFALMSFLQFEPFSIRCYWHSLVQRH--QGKKR 176
            QS+ V KL+A RRWAVTGTP+ NGS DL++LM+FL+FEPFSI+ YW SL+QR   QG K+
Sbjct: 430  QSRVVCKLKASRRWAVTGTPIQNGSFDLYSLMAFLRFEPFSIKSYWQSLIQRPLGQGNKK 489

Query: 177  GQFRLQALMGAIALRRTKDTAMVGLPPKTVETVYVELSGEERQLYDEVKEEVKALLRDYD 356
            G  RLQ LM  I+LRRTK+ +++GLPPKTVET YVELS EERQLYD ++ E K ++++  
Sbjct: 490  GLSRLQVLMATISLRRTKEKSLIGLPPKTVETCYVELSPEERQLYDHMEGEAKGVVQNLI 549

Query: 357  NDGSMVYSYSTMLSMILRLRQICTDFTMCPANFKFGLFPSGDIEDVSKNPELLQTLFRVL 536
            N+GS++ +YST+LS+ILRLRQ+C D ++CP   +     S  +EDV+  PELLQ L   L
Sbjct: 550  NNGSLMRNYSTVLSIILRLRQLCDDMSLCPPELR-SFTTSTSVEDVTDKPELLQKLVAAL 608

Query: 537  QDDEDFDCPICISPPTDIVIT 599
            QD EDFDCPICISPPT+I+IT
Sbjct: 609  QDGEDFDCPICISPPTNIIIT 629