BLASTX nr result

ID: Glycyrrhiza23_contig00018627 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00018627
         (552 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003547207.1| PREDICTED: uncharacterized mitochondrial pro...   192   3e-47
ref|XP_002269568.1| PREDICTED: uncharacterized mitochondrial pro...   162   2e-38
ref|XP_002519696.1| RNA binding protein, putative [Ricinus commu...   160   9e-38
ref|NP_174294.1| Intron maturase, type II-like protein [Arabidop...   155   3e-36
ref|XP_004165625.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...   155   5e-36

>ref|XP_003547207.1| PREDICTED: uncharacterized mitochondrial protein ymf11-like
           [Glycine max]
          Length = 686

 Score =  192 bits (488), Expect = 3e-47
 Identities = 106/168 (63%), Positives = 118/168 (70%), Gaps = 4/168 (2%)
 Frame = -2

Query: 494 MSVRKIVEHLRSRRGVPNTLSSVHSFFSPHSTRSLQTANHSTTLXXXXXXXDPHSLLKQD 315
           MS RKIVEH + RR      S++ SF  P ST S Q  N +           PHSL+KQD
Sbjct: 1   MSFRKIVEHFQYRR------STLSSFSRPFSTHSSQPPNQNQD---------PHSLMKQD 45

Query: 314 PIEICTSLWVKTFSSPKHTSFPNLTGFLSNFDLWLFAYQRSYAHATGTFPPRNAIHAHIL 135
           PIEICTSLWVKTFSS   TSFPNLTGFLSNFDLWL AYQRS AHATGTFPPRNA+HA +L
Sbjct: 46  PIEICTSLWVKTFSSST-TSFPNLTGFLSNFDLWLLAYQRSCAHATGTFPPRNAVHATVL 104

Query: 134 RDLLSLRNAVIRGRFNWNDKAHQLLRGPND----RTLSKRKTQEFLES 3
             LLSLRNAVIR RF WNDK + LLR PND    + LSKRK +  ++S
Sbjct: 105 HSLLSLRNAVIRNRFEWNDKTNPLLRAPNDAAVSKPLSKRKFRAAIQS 152


>ref|XP_002269568.1| PREDICTED: uncharacterized mitochondrial protein ymf11-like [Vitis
           vinifera]
          Length = 689

 Score =  162 bits (411), Expect = 2e-38
 Identities = 74/116 (63%), Positives = 93/116 (80%), Gaps = 4/116 (3%)
 Frame = -2

Query: 338 PHSLLKQDPIEICTSLWVKTFSSPKHTSFPNLTGFLSNFDLWLFAYQRSYAHATGTFPPR 159
           P+SL+K+DPI++C+SLWV++FS+  H  F NLTGFLS FDLW+ AYQRS AH TG+FPPR
Sbjct: 40  PYSLMKEDPIQVCSSLWVRSFSNQTHAPFSNLTGFLSKFDLWVLAYQRSCAHFTGSFPPR 99

Query: 158 NAIHAHILRDLLSLRNAVIRGRFNWNDKAHQLLRGPNDRTL----SKRKTQEFLES 3
           NAIH+ +LRDLLSL+NAV+RGRF+WN K H  +R PN++ L    SKRK Q  LES
Sbjct: 100 NAIHSQVLRDLLSLQNAVVRGRFSWNHKIHSYIRSPNEKPLTEFTSKRKIQSILES 155


>ref|XP_002519696.1| RNA binding protein, putative [Ricinus communis]
           gi|223541113|gb|EEF42669.1| RNA binding protein,
           putative [Ricinus communis]
          Length = 681

 Score =  160 bits (406), Expect = 9e-38
 Identities = 82/155 (52%), Positives = 99/155 (63%)
 Frame = -2

Query: 494 MSVRKIVEHLRSRRGVPNTLSSVHSFFSPHSTRSLQTANHSTTLXXXXXXXDPHSLLKQD 315
           MSVR +++HL S      +L S  S                          DP+SLLKQD
Sbjct: 1   MSVRTLIKHLPSTSSFYKSLRSFSSL---------------------PIHQDPYSLLKQD 39

Query: 314 PIEICTSLWVKTFSSPKHTSFPNLTGFLSNFDLWLFAYQRSYAHATGTFPPRNAIHAHIL 135
           PIEICTSLWVK+FSSP +T+FPNLTGFLS  DLW+ AYQRS A  TGTFPPRNA+H+  L
Sbjct: 40  PIEICTSLWVKSFSSPPNTTFPNLTGFLSKLDLWVLAYQRSCAQVTGTFPPRNALHSQTL 99

Query: 134 RDLLSLRNAVIRGRFNWNDKAHQLLRGPNDRTLSK 30
             LLSL+NAV+  RF WNDK  Q++R PND+  +K
Sbjct: 100 HSLLSLQNAVVHNRFKWNDKTRQIIRSPNDKPFTK 134


>ref|NP_174294.1| Intron maturase, type II-like protein [Arabidopsis thaliana]
           gi|12324175|gb|AAG52062.1|AC022455_16 unknown protein;
           35070-37205 [Arabidopsis thaliana]
           gi|332193046|gb|AEE31167.1| Intron maturase, type
           II-like protein [Arabidopsis thaliana]
          Length = 711

 Score =  155 bits (393), Expect = 3e-36
 Identities = 88/172 (51%), Positives = 108/172 (62%), Gaps = 9/172 (5%)
 Frame = -2

Query: 491 SVRKIVEHLRSRRGVPNTLSSVHSFFSPHSTRSLQTANHSTTLXXXXXXXDPHSLLKQDP 312
           S+R IVEH        NT     S  S   T   ++   S+T        DP+SLLKQDP
Sbjct: 10  SLRNIVEHFHC-----NTFHKPISSLSISPTLKSESREPSST-------QDPYSLLKQDP 57

Query: 311 IEICTSLWVKTFSSPKHTSFPNLTGFLSNFDLWLFAYQRSYAHATGTFPPRNAIHAHILR 132
           ++IC SLWVK+FSSP   +F NLTGFLS FDLW+ AYQR+ AH TGTFPPRNAIHA+ LR
Sbjct: 58  VDICLSLWVKSFSSPPSATFSNLTGFLSKFDLWVLAYQRTCAHVTGTFPPRNAIHANALR 117

Query: 131 DLLSLRNAVIR--GRFNWNDKAHQLLRGPNDRT-------LSKRKTQEFLES 3
            LLSL+NAV R  G+F WNDK +Q +R P D+        +SK K +  +ES
Sbjct: 118 SLLSLQNAVTRSGGKFRWNDKMNQYVRSPKDKISMNGGEGMSKGKVRRIIES 169


>ref|XP_004165625.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized mitochondrial
           protein ymf11-like [Cucumis sativus]
          Length = 697

 Score =  155 bits (391), Expect = 5e-36
 Identities = 87/178 (48%), Positives = 117/178 (65%), Gaps = 14/178 (7%)
 Frame = -2

Query: 494 MSVRKIVEHLR-SRRGVPNTLS---------SVHSFFSPHSTRSLQTANHSTTLXXXXXX 345
           M  R  ++HL+ +RR   N+ S         ++HS   P  +  LQ   H          
Sbjct: 1   MLFRTTIKHLQFNRRTFVNSSSFAPFNSSSPALHSPHPPSISLRLQNPPH-------LHD 53

Query: 344 XDPHSLLKQDPIEICTSLWVKTFSSPKHTSFPNLTGFLSNFDLWLFAYQRSYAHATGTFP 165
            DP+S LK+DPI+IC+S+W+K F+S  ++SF +L+ FLS FDLW+ AYQRS A  TG FP
Sbjct: 54  EDPYSHLKEDPIDICSSIWLKAFASLPNSSFSHLSSFLSKFDLWVLAYQRSCADLTGNFP 113

Query: 164 PRNAIHAHILRDLLSLRNAVIRGRFNWNDKAHQLLRGPNDRT----LSKRKTQEFLES 3
           PRNAIH+H+LRDLLSLRNAVI G+F+WN KA+QL+R PND++    +SKRK +  LES
Sbjct: 114 PRNAIHSHVLRDLLSLRNAVINGKFSWNRKANQLIRCPNDKSRTHLISKRKLRAMLES 171


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