BLASTX nr result

ID: Glycyrrhiza23_contig00018596 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00018596
         (429 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003538372.1| PREDICTED: FACT complex subunit SPT16-like i...   241   4e-62
ref|XP_003538371.1| PREDICTED: FACT complex subunit SPT16-like [...   241   6e-62
ref|XP_003553020.1| PREDICTED: FACT complex subunit SPT16-like [...   239   2e-61
ref|XP_003552890.1| PREDICTED: FACT complex subunit SPT16-like [...   238   4e-61
ref|XP_003600629.1| FACT complex subunit SPT16 [Medicago truncat...   227   9e-58

>ref|XP_003538372.1| PREDICTED: FACT complex subunit SPT16-like isoform 1 [Glycine max]
           gi|356539783|ref|XP_003538373.1| PREDICTED: FACT complex
           subunit SPT16-like isoform 2 [Glycine max]
          Length = 1069

 Score =  241 bits (615), Expect = 4e-62
 Identities = 120/142 (84%), Positives = 133/142 (93%)
 Frame = +3

Query: 3   NKLSAAYQAAVSIVEKDAPDLISHLTKSAGTGIGIEFRESGLNLNAKNEQIIREGMAFNV 182
           N+LSAAY+AAVS+VE DAPDLIS+LTKSAGTGIGIEFRESGLN+NAKNEQ+++EGM FNV
Sbjct: 348 NRLSAAYEAAVSVVENDAPDLISYLTKSAGTGIGIEFRESGLNINAKNEQLVKEGMVFNV 407

Query: 183 SLGFQNLQSEKAKSKNKLFSLLLADTVIVTKDKTEVVTSMSSKALKDVAYSFNEDEEEEK 362
           SLGFQN+Q E +KSKNK FSLLLADTVI+ KDKTEVVTSMSSKALKDVAYSFNEDEEEE 
Sbjct: 408 SLGFQNVQRESSKSKNKHFSLLLADTVIINKDKTEVVTSMSSKALKDVAYSFNEDEEEEN 467

Query: 363 PKAKTDANGAEPMMSKTTLRSD 428
           P+AK D NGAEP+MSKTTLRSD
Sbjct: 468 PRAKADTNGAEPLMSKTTLRSD 489


>ref|XP_003538371.1| PREDICTED: FACT complex subunit SPT16-like [Glycine max]
          Length = 1068

 Score =  241 bits (614), Expect = 6e-62
 Identities = 123/142 (86%), Positives = 131/142 (92%)
 Frame = +3

Query: 3   NKLSAAYQAAVSIVEKDAPDLISHLTKSAGTGIGIEFRESGLNLNAKNEQIIREGMAFNV 182
           NKLS AYQAAVS+VE+DAPDLIS+LTKSAGTGIGIEFRESGLNLNAKNEQIIREGM FNV
Sbjct: 348 NKLSVAYQAAVSVVERDAPDLISYLTKSAGTGIGIEFRESGLNLNAKNEQIIREGMVFNV 407

Query: 183 SLGFQNLQSEKAKSKNKLFSLLLADTVIVTKDKTEVVTSMSSKALKDVAYSFNEDEEEEK 362
           SLGFQNLQ EK+KSKNK FSLLLADTVI+TKDKTE+VT+ SSKALKDVAYSFNEDEEEE+
Sbjct: 408 SLGFQNLQCEKSKSKNKQFSLLLADTVIITKDKTEIVTATSSKALKDVAYSFNEDEEEER 467

Query: 363 PKAKTDANGAEPMMSKTTLRSD 428
           P  K DA  AEP MSKTTLRSD
Sbjct: 468 PSTKPDAKKAEPFMSKTTLRSD 489


>ref|XP_003553020.1| PREDICTED: FACT complex subunit SPT16-like [Glycine max]
          Length = 1068

 Score =  239 bits (609), Expect = 2e-61
 Identities = 122/142 (85%), Positives = 130/142 (91%)
 Frame = +3

Query: 3   NKLSAAYQAAVSIVEKDAPDLISHLTKSAGTGIGIEFRESGLNLNAKNEQIIREGMAFNV 182
           NKLS AYQAAVS+VE+DAPDLIS+LTKSAGTGIGIEFRESGLNLNAKNEQIIREGM FNV
Sbjct: 348 NKLSVAYQAAVSVVERDAPDLISYLTKSAGTGIGIEFRESGLNLNAKNEQIIREGMVFNV 407

Query: 183 SLGFQNLQSEKAKSKNKLFSLLLADTVIVTKDKTEVVTSMSSKALKDVAYSFNEDEEEEK 362
           SLGFQNLQ E +KSKNK FSLLLADTVI+TKDKTE+VTS SSKALKDVAYSFNEDEEEE+
Sbjct: 408 SLGFQNLQCENSKSKNKQFSLLLADTVIITKDKTEIVTSTSSKALKDVAYSFNEDEEEER 467

Query: 363 PKAKTDANGAEPMMSKTTLRSD 428
           P  K+DA  AEP M KTTLRSD
Sbjct: 468 PSTKSDAKKAEPFMCKTTLRSD 489


>ref|XP_003552890.1| PREDICTED: FACT complex subunit SPT16-like [Glycine max]
          Length = 1064

 Score =  238 bits (607), Expect = 4e-61
 Identities = 119/142 (83%), Positives = 131/142 (92%)
 Frame = +3

Query: 3   NKLSAAYQAAVSIVEKDAPDLISHLTKSAGTGIGIEFRESGLNLNAKNEQIIREGMAFNV 182
           N+LSA YQAAVS+VE +APDLIS+LTKSAGTGIGIEFRESGLN+NAKNEQI++EGM FNV
Sbjct: 345 NRLSATYQAAVSVVENEAPDLISYLTKSAGTGIGIEFRESGLNINAKNEQIVKEGMVFNV 404

Query: 183 SLGFQNLQSEKAKSKNKLFSLLLADTVIVTKDKTEVVTSMSSKALKDVAYSFNEDEEEEK 362
           SLGFQN+Q E  KSK+K FSLLLADTVI+ KDKTEVVTSMSSKALKD+AYSFNEDEEEE 
Sbjct: 405 SLGFQNVQRESTKSKSKHFSLLLADTVIINKDKTEVVTSMSSKALKDIAYSFNEDEEEEN 464

Query: 363 PKAKTDANGAEPMMSKTTLRSD 428
           P AK DANGAEP+MSKTTLRSD
Sbjct: 465 PSAKADANGAEPLMSKTTLRSD 486


>ref|XP_003600629.1| FACT complex subunit SPT16 [Medicago truncatula]
           gi|355489677|gb|AES70880.1| FACT complex subunit SPT16
           [Medicago truncatula]
          Length = 1066

 Score =  227 bits (578), Expect = 9e-58
 Identities = 113/142 (79%), Positives = 131/142 (92%)
 Frame = +3

Query: 3   NKLSAAYQAAVSIVEKDAPDLISHLTKSAGTGIGIEFRESGLNLNAKNEQIIREGMAFNV 182
           NKLSAAY AAVS+VEK+APD++S LTKSAGTGIGIEFRESGLN+NAKN+QI++EGM FNV
Sbjct: 348 NKLSAAYLAAVSVVEKEAPDMVSCLTKSAGTGIGIEFRESGLNINAKNDQIVKEGMTFNV 407

Query: 183 SLGFQNLQSEKAKSKNKLFSLLLADTVIVTKDKTEVVTSMSSKALKDVAYSFNEDEEEEK 362
           SLGFQNLQ E +KSKNK+F+LLLADTVI+ KDK++VVTS+SSKALKDVAYSFNEDEEEEK
Sbjct: 408 SLGFQNLQCENSKSKNKVFALLLADTVIINKDKSDVVTSVSSKALKDVAYSFNEDEEEEK 467

Query: 363 PKAKTDANGAEPMMSKTTLRSD 428
           PK+K D +G E + SKTTLRSD
Sbjct: 468 PKSKADHSGTEHLASKTTLRSD 489


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