BLASTX nr result

ID: Glycyrrhiza23_contig00018558 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00018558
         (355 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003555264.1| PREDICTED: probable ATP-dependent RNA helica...   222   2e-56
ref|XP_003535131.1| PREDICTED: probable ATP-dependent RNA helica...   203   1e-50
ref|XP_002315906.1| predicted protein [Populus trichocarpa] gi|2...   200   1e-49
ref|XP_002526307.1| ATP-dependent RNA helicase, putative [Ricinu...   198   3e-49
emb|CBI26949.3| unnamed protein product [Vitis vinifera]              197   1e-48

>ref|XP_003555264.1| PREDICTED: probable ATP-dependent RNA helicase DHX36-like [Glycine
            max]
          Length = 1209

 Score =  222 bits (566), Expect = 2e-56
 Identities = 108/116 (93%), Positives = 112/116 (96%)
 Frame = -3

Query: 353  PKLGKMLILGAIFNCLDPILTVVAGLSVRDPFLTPLDKKDLAEAAKSQFCGAYSDHLALV 174
            PKLGKMLILGAIFNCLDPILTVVAGLSVRDPFLTPLDK+DLAE AKSQFCGAYSDHLALV
Sbjct: 806  PKLGKMLILGAIFNCLDPILTVVAGLSVRDPFLTPLDKRDLAEEAKSQFCGAYSDHLALV 865

Query: 173  RAYEGWKDAEIDHGGYEYCWKNFLSLQSMKAIDALRREFIGLLKDIGLVDSNTASC 6
            RAYEGW+DAE+D GGYEYCWKNFLS QSMKAIDALRREFI L+KDIGLVDSNTASC
Sbjct: 866  RAYEGWRDAEMDLGGYEYCWKNFLSSQSMKAIDALRREFICLVKDIGLVDSNTASC 921


>ref|XP_003535131.1| PREDICTED: probable ATP-dependent RNA helicase DHX36-like [Glycine
            max]
          Length = 1093

 Score =  203 bits (516), Expect = 1e-50
 Identities = 98/116 (84%), Positives = 104/116 (89%)
 Frame = -3

Query: 353  PKLGKMLILGAIFNCLDPILTVVAGLSVRDPFLTPLDKKDLAEAAKSQFCGAYSDHLALV 174
            PKLGKMLI G IFNCLDPILT+VAGLSVRDPFLTPLDKKDLAEAAKSQF   YSDHLA+V
Sbjct: 694  PKLGKMLIFGVIFNCLDPILTIVAGLSVRDPFLTPLDKKDLAEAAKSQFSQDYSDHLAIV 753

Query: 173  RAYEGWKDAEIDHGGYEYCWKNFLSLQSMKAIDALRREFIGLLKDIGLVDSNTASC 6
            RAYEGWKDAE D  G+EYCWKNFLS QSM+ IDALR EF+ LLKDIGLVDSNT+SC
Sbjct: 754  RAYEGWKDAEKDLNGHEYCWKNFLSAQSMRVIDALRMEFLSLLKDIGLVDSNTSSC 809


>ref|XP_002315906.1| predicted protein [Populus trichocarpa] gi|222864946|gb|EEF02077.1|
           predicted protein [Populus trichocarpa]
          Length = 1053

 Score =  200 bits (508), Expect = 1e-49
 Identities = 96/116 (82%), Positives = 102/116 (87%)
 Frame = -3

Query: 353 PKLGKMLILGAIFNCLDPILTVVAGLSVRDPFLTPLDKKDLAEAAKSQFCGAYSDHLALV 174
           PKLGKML+LGAI NCLDP+LTVVAGLSVRDPFL PLDKKDLAEAAKSQF G YSDHLALV
Sbjct: 651 PKLGKMLVLGAILNCLDPVLTVVAGLSVRDPFLMPLDKKDLAEAAKSQFSGDYSDHLALV 710

Query: 173 RAYEGWKDAEIDHGGYEYCWKNFLSLQSMKAIDALRREFIGLLKDIGLVDSNTASC 6
           RAYEGWKDAE D  GYEYCWKNFLS+QSMKAID+LR+EF  LL D GLVD N  +C
Sbjct: 711 RAYEGWKDAERDLSGYEYCWKNFLSVQSMKAIDSLRKEFFSLLMDTGLVDGNPTTC 766


>ref|XP_002526307.1| ATP-dependent RNA helicase, putative [Ricinus communis]
            gi|223534388|gb|EEF36096.1| ATP-dependent RNA helicase,
            putative [Ricinus communis]
          Length = 1172

 Score =  198 bits (504), Expect = 3e-49
 Identities = 94/116 (81%), Positives = 104/116 (89%)
 Frame = -3

Query: 353  PKLGKMLILGAIFNCLDPILTVVAGLSVRDPFLTPLDKKDLAEAAKSQFCGAYSDHLALV 174
            PKLGKMLILGAIFNCLDP+LT+VAGLSVRDPFLTP+DKKDLAEAAKSQF   YSDHLALV
Sbjct: 770  PKLGKMLILGAIFNCLDPVLTIVAGLSVRDPFLTPMDKKDLAEAAKSQFSCDYSDHLALV 829

Query: 173  RAYEGWKDAEIDHGGYEYCWKNFLSLQSMKAIDALRREFIGLLKDIGLVDSNTASC 6
            RAYEGWKDAE +  GY+YCWKNFLS+QSMKAID+LR+EF+ LLKD GLVD +   C
Sbjct: 830  RAYEGWKDAERNFAGYDYCWKNFLSMQSMKAIDSLRKEFLSLLKDAGLVDGSITFC 885


>emb|CBI26949.3| unnamed protein product [Vitis vinifera]
          Length = 1181

 Score =  197 bits (500), Expect = 1e-48
 Identities = 96/115 (83%), Positives = 102/115 (88%)
 Frame = -3

Query: 353  PKLGKMLILGAIFNCLDPILTVVAGLSVRDPFLTPLDKKDLAEAAKSQFCGAYSDHLALV 174
            PKLGKMLILGA+FNCLDPILT+VAGLSVRDPFLTPLDKKDLAEAAK+QF   YSDHLALV
Sbjct: 775  PKLGKMLILGAVFNCLDPILTIVAGLSVRDPFLTPLDKKDLAEAAKAQFSHDYSDHLALV 834

Query: 173  RAYEGWKDAEIDHGGYEYCWKNFLSLQSMKAIDALRREFIGLLKDIGLVDSNTAS 9
            RAYEGWKDAE D  GYEYCWKNFLS QSMKAID+LR+EF  LLKD  LVD N A+
Sbjct: 835  RAYEGWKDAEKDQIGYEYCWKNFLSAQSMKAIDSLRKEFFSLLKDTDLVDGNMAT 889


Top