BLASTX nr result

ID: Glycyrrhiza23_contig00018548 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00018548
         (457 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK36299.1| unknown [Lotus japonicus]                               87   2e-15
gb|AFK46632.1| unknown [Medicago truncatula]                           81   8e-14
ref|XP_003608619.1| AT-hook protein [Medicago truncatula] gi|355...    81   8e-14
ref|XP_003524712.1| PREDICTED: putative DNA-binding protein ESCA...    80   2e-13
ref|XP_003538778.1| PREDICTED: uncharacterized protein LOC100789...    64   1e-08

>gb|AFK36299.1| unknown [Lotus japonicus]
          Length = 63

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 39/46 (84%), Positives = 41/46 (89%)
 Frame = +3

Query: 3   GPSTESSEDNDHGPFNNRGPGLYNNASQHVHNMQMYHHPLWAGQTH 140
           GPSTESSEDND   FN RGPGLYNNA+Q VH+MQMYHHPLWAGQTH
Sbjct: 18  GPSTESSEDNDQSSFN-RGPGLYNNATQPVHSMQMYHHPLWAGQTH 62


>gb|AFK46632.1| unknown [Medicago truncatula]
          Length = 78

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 37/48 (77%), Positives = 40/48 (83%), Gaps = 2/48 (4%)
 Frame = +3

Query: 3   GPSTESSEDNDHGPFNNRGPGLYNNASQHVHN--MQMYHHPLWAGQTH 140
           GPSTESSE+NDH    +RGPGLYNNA+Q VHN   QMYHHPLWAGQTH
Sbjct: 30  GPSTESSEENDHNSNFSRGPGLYNNANQPVHNNMQQMYHHPLWAGQTH 77


>ref|XP_003608619.1| AT-hook protein [Medicago truncatula] gi|355509674|gb|AES90816.1|
           AT-hook protein [Medicago truncatula]
          Length = 334

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 37/48 (77%), Positives = 40/48 (83%), Gaps = 2/48 (4%)
 Frame = +3

Query: 3   GPSTESSEDNDHGPFNNRGPGLYNNASQHVHN--MQMYHHPLWAGQTH 140
           GPSTESSE+NDH    +RGPGLYNNA+Q VHN   QMYHHPLWAGQTH
Sbjct: 286 GPSTESSEENDHNSNFSRGPGLYNNANQPVHNNMQQMYHHPLWAGQTH 333


>ref|XP_003524712.1| PREDICTED: putative DNA-binding protein ESCAROLA-like [Glycine max]
          Length = 288

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 39/53 (73%), Positives = 41/53 (77%), Gaps = 6/53 (11%)
 Frame = +3

Query: 3   GPSTESSEDNDHGPFNNRGPG------LYNNASQHVHNMQMYHHPLWAGQTHQ 143
           GPSTESSE+ DH PF  RGPG      LYNNASQ VHNM MYHHPLWAGQ+HQ
Sbjct: 237 GPSTESSEEQDHSPFC-RGPGPGSGHGLYNNASQPVHNMPMYHHPLWAGQSHQ 288


>ref|XP_003538778.1| PREDICTED: uncharacterized protein LOC100789687 [Glycine max]
          Length = 339

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 32/50 (64%), Positives = 36/50 (72%), Gaps = 3/50 (6%)
 Frame = +3

Query: 3   GPSTESSEDNDHGPFNNR--GPGLY-NNASQHVHNMQMYHHPLWAGQTHQ 143
           GPSTESSEDN++  F+    GPGLY NNASQ +H M MY H LWAG T Q
Sbjct: 290 GPSTESSEDNENSHFSQGPGGPGLYDNNASQPIHTMPMYQHQLWAGHTQQ 339


Top