BLASTX nr result

ID: Glycyrrhiza23_contig00018534 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00018534
         (882 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK36982.1| unknown [Medicago truncatula]                          269   6e-70
ref|XP_003613588.1| F-box/FBD/LRR-repeat protein [Medicago trunc...   269   6e-70
ref|XP_003630442.1| F-box/FBD/LRR-repeat protein [Medicago trunc...   194   3e-47
gb|ABD33321.1| Cyclin-like F-box; FBD [Medicago truncatula]           191   3e-46
ref|XP_003625084.1| F-box/FBD/LRR-repeat protein [Medicago trunc...   191   3e-46

>gb|AFK36982.1| unknown [Medicago truncatula]
          Length = 418

 Score =  269 bits (688), Expect = 6e-70
 Identities = 146/245 (59%), Positives = 174/245 (71%), Gaps = 3/245 (1%)
 Frame = -1

Query: 726 MTRSNKKAGRGGDIDRISDLPSNIIDGILEHLDIEDMVRTSILSRKWRYMWVSVPRLEFD 547
           MT SNKKA  G  +DRISDLPSN+IDGIL+HL+I D+ RTSILSRKWR +W+S P LEFD
Sbjct: 1   MTLSNKKANYGDHLDRISDLPSNVIDGILQHLNIRDLARTSILSRKWRDIWISFPWLEFD 60

Query: 546 GTFFE-NNTMDNEDH--EICSIITEVLLLHNGPVYKFTLEIPFQFSIRTEWLSKCILFLS 376
             FF+  +  D +DH  E+C IITEVLLLHNGP+ KFTL IP  F+I    + K ILFLS
Sbjct: 61  KDFFDLYDLKDFKDHSPEVCIIITEVLLLHNGPINKFTLFIPSGFNIPFGCIVKWILFLS 120

Query: 375 TSGIKNLKLKFGCCGKGPYKVPSHIFSCQELTHFELYGFNLSVPPPNFCGFKNLYALHFH 196
             G+K ++L        PY+VPSH FS Q+LTH  +  F L VPP NFCGFK+L   HF 
Sbjct: 121 RKGVKFIQLASN--ESVPYRVPSHFFSFQKLTHVRICKFKLLVPP-NFCGFKSLVHFHFE 177

Query: 195 YVRFESGALEKFVSGCPLLEELDIRSCYNLECIDISAPNLKVLRITNDFLIKPICLKKAK 16
            + FE GALE  +SGCPLLEEL I +C  +ECID+SAP LKV  I +   IK ICL+KAK
Sbjct: 178 RMTFEFGALESLISGCPLLEELYIVNCSGIECIDLSAPTLKVFSIEHIQAIKSICLEKAK 237

Query: 15  NLIDL 1
           NLIDL
Sbjct: 238 NLIDL 242


>ref|XP_003613588.1| F-box/FBD/LRR-repeat protein [Medicago truncatula]
           gi|355514923|gb|AES96546.1| F-box/FBD/LRR-repeat protein
           [Medicago truncatula]
          Length = 499

 Score =  269 bits (688), Expect = 6e-70
 Identities = 146/245 (59%), Positives = 174/245 (71%), Gaps = 3/245 (1%)
 Frame = -1

Query: 726 MTRSNKKAGRGGDIDRISDLPSNIIDGILEHLDIEDMVRTSILSRKWRYMWVSVPRLEFD 547
           MT SNKKA  G  +DRISDLPSN+IDGIL+HL+I D+ RTSILSRKWR +W+S P LEFD
Sbjct: 82  MTLSNKKANYGDHLDRISDLPSNVIDGILQHLNIRDLARTSILSRKWRDIWISFPWLEFD 141

Query: 546 GTFFE-NNTMDNEDH--EICSIITEVLLLHNGPVYKFTLEIPFQFSIRTEWLSKCILFLS 376
             FF+  +  D +DH  E+C IITEVLLLHNGP+ KFTL IP  F+I    + K ILFLS
Sbjct: 142 KDFFDLYDLKDFKDHSPEVCIIITEVLLLHNGPINKFTLFIPSGFNIPFGCIVKWILFLS 201

Query: 375 TSGIKNLKLKFGCCGKGPYKVPSHIFSCQELTHFELYGFNLSVPPPNFCGFKNLYALHFH 196
             G+K ++L        PY+VPSH FS Q+LTH  +  F L VPP NFCGFK+L   HF 
Sbjct: 202 RKGVKFIQLASN--ESVPYRVPSHFFSFQKLTHVRICKFKLLVPP-NFCGFKSLVHFHFE 258

Query: 195 YVRFESGALEKFVSGCPLLEELDIRSCYNLECIDISAPNLKVLRITNDFLIKPICLKKAK 16
            + FE GALE  +SGCPLLEEL I +C  +ECID+SAP LKV  I +   IK ICL+KAK
Sbjct: 259 RMTFEFGALESLISGCPLLEELYIVNCSGIECIDLSAPTLKVFSIEHIQAIKSICLEKAK 318

Query: 15  NLIDL 1
           NLIDL
Sbjct: 319 NLIDL 323


>ref|XP_003630442.1| F-box/FBD/LRR-repeat protein [Medicago truncatula]
           gi|355524464|gb|AET04918.1| F-box/FBD/LRR-repeat protein
           [Medicago truncatula]
          Length = 380

 Score =  194 bits (492), Expect = 3e-47
 Identities = 117/245 (47%), Positives = 146/245 (59%), Gaps = 3/245 (1%)
 Frame = -1

Query: 726 MTRSNKKAGRGGDIDRISDLPSNIIDGILEHLDIEDMVRTSILSRKWRYMWVSVPRLEFD 547
           MT   KKA  G  IDRISDLPSN+IDGILEHL+  D+VRTS+LSRKWRYMW++VPRLEF 
Sbjct: 1   MTLFTKKANCGDHIDRISDLPSNVIDGILEHLNARDLVRTSVLSRKWRYMWITVPRLEFC 60

Query: 546 GTFFENNTMDNEDHEICSIITEVLLLHNGPVYKFTLEIPFQF-SIRTEWLSKCILFLSTS 370
             FF     D E  ++  IITEVL LHNGP+YKF L I   F   ++ +L + ++F S  
Sbjct: 61  QDFF-CKYKDLEALDVSRIITEVLFLHNGPIYKFILFITSNFLGFKSGYLIRWVMFSSRK 119

Query: 369 GIKNLKLKFGCCGKGPYKVPSHIFSCQELTHFELYGFNLSVPPPNFCGFKNLYALHFHYV 190
           G+KN++L         Y++PSH+FSCQELTH  L                +L  +H    
Sbjct: 120 GVKNIQLVND--RYYIYRMPSHLFSCQELTHNAL----------------DLSLVHL--- 158

Query: 189 RFESGALEKFVSGCPLLEELDIRSCYNLECIDISAPNLKVLRI--TNDFLIKPICLKKAK 16
                     + GC LL+EL    C   EC+D+SAP L V RI    +  IK ICL+KAK
Sbjct: 159 --------SLIFGCSLLQELYTVQCSGYECVDLSAPTLTVFRIQCKCNHAIKSICLEKAK 210

Query: 15  NLIDL 1
           NLIDL
Sbjct: 211 NLIDL 215


>gb|ABD33321.1| Cyclin-like F-box; FBD [Medicago truncatula]
          Length = 430

 Score =  191 bits (484), Expect = 3e-46
 Identities = 114/238 (47%), Positives = 142/238 (59%), Gaps = 9/238 (3%)
 Frame = -1

Query: 687 IDRISDLPSNIIDGILEHLDIEDMVRTSILSRKWRYMWVSVPRLEFDGTFFEN--NTMDN 514
           IDRISDLP N+IDGIL HLDI+D+V TSILS++WRY W   PRL F   FFE   +  D 
Sbjct: 10  IDRISDLPCNVIDGILSHLDIKDLVGTSILSKQWRYKWTKAPRLWFSEDFFEEYEDLEDL 69

Query: 513 EDHEICSIITEVLLLHNGPVYKFTLEIP--FQFSIRTEWLSKCILFLSTSGIKNLKLKFG 340
           ED     IIT+VL+ H GP+ KF L I   ++F I  E L K I  LS   IK+L+L   
Sbjct: 70  EDPVTYRIITDVLMQHQGPIDKFGLFISNDYKFEITIEHLDKWIPILSERNIKHLELV-- 127

Query: 339 CCGKGPYKVPSHIF-----SCQELTHFELYGFNLSVPPPNFCGFKNLYALHFHYVRFESG 175
                    P  +       C+ELT+ +  GF+LS+PP +F GF+ L  LH  +VRFE G
Sbjct: 128 ----NHETHPDQMLYIVDLPCKELTYSKFLGFDLSIPP-DFSGFERLLELHLLFVRFEPG 182

Query: 174 ALEKFVSGCPLLEELDIRSCYNLECIDISAPNLKVLRITNDFLIKPICLKKAKNLIDL 1
           A E  +SGCPLL+ L    C   E  D + P L+VL I  +  +K ICLKKA NLIDL
Sbjct: 183 AFESLISGCPLLKNLHFVLCKEFEYFDFAPPTLEVLLIEFNPKMKSICLKKANNLIDL 240


>ref|XP_003625084.1| F-box/FBD/LRR-repeat protein [Medicago truncatula]
           gi|355500099|gb|AES81302.1| F-box/FBD/LRR-repeat protein
           [Medicago truncatula]
          Length = 432

 Score =  191 bits (484), Expect = 3e-46
 Identities = 114/238 (47%), Positives = 142/238 (59%), Gaps = 9/238 (3%)
 Frame = -1

Query: 687 IDRISDLPSNIIDGILEHLDIEDMVRTSILSRKWRYMWVSVPRLEFDGTFFEN--NTMDN 514
           IDRISDLP N+IDGIL HLDI+D+V TSILS++WRY W   PRL F   FFE   +  D 
Sbjct: 10  IDRISDLPCNVIDGILSHLDIKDLVGTSILSKQWRYKWTKAPRLWFSEDFFEEYEDLEDL 69

Query: 513 EDHEICSIITEVLLLHNGPVYKFTLEIP--FQFSIRTEWLSKCILFLSTSGIKNLKLKFG 340
           ED     IIT+VL+ H GP+ KF L I   ++F I  E L K I  LS   IK+L+L   
Sbjct: 70  EDPVTYRIITDVLMQHQGPIDKFGLFISNDYKFEITIEHLDKWIPILSERNIKHLELV-- 127

Query: 339 CCGKGPYKVPSHIF-----SCQELTHFELYGFNLSVPPPNFCGFKNLYALHFHYVRFESG 175
                    P  +       C+ELT+ +  GF+LS+PP +F GF+ L  LH  +VRFE G
Sbjct: 128 ----NHETHPDQMLYIVDLPCKELTYSKFLGFDLSIPP-DFSGFERLLELHLLFVRFEPG 182

Query: 174 ALEKFVSGCPLLEELDIRSCYNLECIDISAPNLKVLRITNDFLIKPICLKKAKNLIDL 1
           A E  +SGCPLL+ L    C   E  D + P L+VL I  +  +K ICLKKA NLIDL
Sbjct: 183 AFESLISGCPLLKNLHFVLCKEFEYFDFAPPTLEVLLIEFNPKMKSICLKKANNLIDL 240


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