BLASTX nr result

ID: Glycyrrhiza23_contig00018527 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00018527
         (228 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003618847.1| Chloride channel protein CLC-a [Medicago tru...    94   1e-17
ref|NP_001236494.1| chloride channel [Glycine max] gi|66220164|g...    93   2e-17
ref|XP_003553925.1| PREDICTED: chloride channel protein CLC-b-li...    84   1e-14
gb|AAL24139.1| putative anion channel protein [Arabidopsis thali...    84   2e-14
gb|AAB17007.1| voltage-gated chloride channel [Arabidopsis thali...    84   2e-14

>ref|XP_003618847.1| Chloride channel protein CLC-a [Medicago truncatula]
           gi|355493862|gb|AES75065.1| Chloride channel protein
           CLC-a [Medicago truncatula]
          Length = 780

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 45/75 (60%), Positives = 56/75 (74%)
 Frame = +2

Query: 2   SFCGVEKVANIVNALRNTTHNGFPVMDGGEGNDHVIELHGLILRTHLIQVLKKKWFLKXX 181
           SF G+EKV+NIV+AL+NTTHNGFPVMD G+    +++LHG+ILR HLI+VLKKKWFLK  
Sbjct: 604 SFRGIEKVSNIVDALKNTTHNGFPVMDDGD-EVEIVKLHGVILRAHLIKVLKKKWFLKEK 662

Query: 182 XXXXXXXXXXKFTWV 226
                     KF+WV
Sbjct: 663 RRTEEWEVREKFSWV 677


>ref|NP_001236494.1| chloride channel [Glycine max] gi|66220164|gb|AAY43007.1| chloride
           channel [Glycine max]
          Length = 783

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 50/80 (62%), Positives = 53/80 (66%), Gaps = 5/80 (6%)
 Frame = +2

Query: 2   SFCGVEKVANIVNALRNTTHNGFPVMDGG-----EGNDHVIELHGLILRTHLIQVLKKKW 166
           SF GVEKVANIVNAL+NTTHNGFPVMD G        +   ELHG+ILR HLIQV KKKW
Sbjct: 606 SFKGVEKVANIVNALKNTTHNGFPVMDCGLVPTTGVANEATELHGIILRAHLIQVRKKKW 665

Query: 167 FLKXXXXXXXXXXXXKFTWV 226
           FLK            KFTWV
Sbjct: 666 FLKERRRTEEWEVREKFTWV 685


>ref|XP_003553925.1| PREDICTED: chloride channel protein CLC-b-like [Glycine max]
          Length = 790

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 46/78 (58%), Positives = 48/78 (61%), Gaps = 6/78 (7%)
 Frame = +2

Query: 11  GVEKVANIVNALRNTTHNGFPVMDGGEGNDHV------IELHGLILRTHLIQVLKKKWFL 172
           GVEKVA IV+ L+NTTHN FPVMD G     V       ELHGLILR HLIQ LKKKWFL
Sbjct: 611 GVEKVAKIVDVLKNTTHNAFPVMDDGVVPPVVGQANGGTELHGLILRAHLIQALKKKWFL 670

Query: 173 KXXXXXXXXXXXXKFTWV 226
           K            KFTWV
Sbjct: 671 KERRRTEEWEVREKFTWV 688


>gb|AAL24139.1| putative anion channel protein [Arabidopsis thaliana]
          Length = 775

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 42/70 (60%), Positives = 48/70 (68%)
 Frame = +2

Query: 11  GVEKVANIVNALRNTTHNGFPVMDGGEGNDHVIELHGLILRTHLIQVLKKKWFLKXXXXX 190
           GVEKVANIV+ LRNTTHN FPV+DG + N    ELHGLILR HL++VLKK+WFL      
Sbjct: 604 GVEKVANIVDVLRNTTHNAFPVLDGADQNTGT-ELHGLILRAHLVKVLKKRWFLNEKRRT 662

Query: 191 XXXXXXXKFT 220
                  KFT
Sbjct: 663 EEWEVREKFT 672


>gb|AAB17007.1| voltage-gated chloride channel [Arabidopsis thaliana]
          Length = 773

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 42/70 (60%), Positives = 48/70 (68%)
 Frame = +2

Query: 11  GVEKVANIVNALRNTTHNGFPVMDGGEGNDHVIELHGLILRTHLIQVLKKKWFLKXXXXX 190
           GVEKVANIV+ LRNTTHN FPV+DG + N    ELHGLILR HL++VLKK+WFL      
Sbjct: 602 GVEKVANIVDVLRNTTHNAFPVLDGADQNTGT-ELHGLILRAHLVKVLKKRWFLNEKRRT 660

Query: 191 XXXXXXXKFT 220
                  KFT
Sbjct: 661 EEWEVREKFT 670


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