BLASTX nr result

ID: Glycyrrhiza23_contig00018495 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00018495
         (1455 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003524849.1| PREDICTED: ribosome biogenesis protein WDR12...   800   0.0  
ref|XP_003516844.1| PREDICTED: ribosome biogenesis protein WDR12...   798   0.0  
ref|XP_003543948.1| PREDICTED: ribosome biogenesis protein WDR12...   795   0.0  
ref|XP_003554839.1| PREDICTED: ribosome biogenesis protein WDR12...   793   0.0  
gb|ACJ85096.1| unknown [Medicago truncatula] gi|388520005|gb|AFK...   783   0.0  

>ref|XP_003524849.1| PREDICTED: ribosome biogenesis protein WDR12 homolog [Glycine max]
          Length = 427

 Score =  800 bits (2066), Expect = 0.0
 Identities = 384/429 (89%), Positives = 407/429 (94%)
 Frame = -3

Query: 1333 EASARRIQVRFVTKLDEPLRVPPTAIAIPADLTRFGLSSLVNALLQSKNNDDDYKPEPFD 1154
            E SARRIQVRFVTKL EP ++P TAIAIPADLTRFGLSSLVNALL+S +      PEPFD
Sbjct: 4    EGSARRIQVRFVTKLSEPYKIPTTAIAIPADLTRFGLSSLVNALLESND-----APEPFD 58

Query: 1153 FLIDGEFIRMSLDQFLLAKGISAERILEIEYTRVVAPRKEEDPSLHDDWVSAVDGSSSRF 974
            FLIDGEFIRMSL+QFLLAKGISAERILE+EYTR VAPRKEEDPSLHDDWVSAVDGSSSRF
Sbjct: 59   FLIDGEFIRMSLEQFLLAKGISAERILEVEYTRAVAPRKEEDPSLHDDWVSAVDGSSSRF 118

Query: 973  FLTGCYDGLGRVWKGAGLCTHMLEGHSDAVTSVSIINPKGVETVTLATASKDRTLRLWKI 794
            FLTGCYDGLGRVWKGAGLCTH+L+GHSDAVTSVSIINPKG ETVT+ATASKDRTLRLWK+
Sbjct: 119  FLTGCYDGLGRVWKGAGLCTHILDGHSDAVTSVSIINPKGAETVTVATASKDRTLRLWKL 178

Query: 793  NTDEAINHPMRVRAFKILRGHKSSVQSVAAQTNGEMVCSGSWDCTINLWQTNDFNAEDDL 614
            NT++ +NHPMRVRA+KILRGHKSSVQSVA QT+GEMVCSGSWDCTINLWQTNDFNAEDD 
Sbjct: 179  NTEDPVNHPMRVRAYKILRGHKSSVQSVAVQTSGEMVCSGSWDCTINLWQTNDFNAEDDQ 238

Query: 613  VSKKRKVEGQVEDSQLEGEAFTTLVGHTQCVSSVVWPQRESIYSASWDHSVRKWDVETGK 434
            VSKKRKV GQVE+SQLEGEAFTTLVGHTQCVSSVVWPQRE IYSASWDHS+RKWDVE GK
Sbjct: 239  VSKKRKVGGQVEESQLEGEAFTTLVGHTQCVSSVVWPQRELIYSASWDHSIRKWDVEIGK 298

Query: 433  NLSDIFCGKALNCLDIGGEGSALIAAGGSDPVLRIWDPRKPGSSAPVFQFASHTSWISSC 254
            NL+DIFCGK LNCLDIGGEGSALIAAGGSDPVLRIWDPRKPG+SAPVFQFASHTSW+S+C
Sbjct: 299  NLTDIFCGKVLNCLDIGGEGSALIAAGGSDPVLRIWDPRKPGTSAPVFQFASHTSWVSAC 358

Query: 253  KWHDNSWFHLLSASYDGKVMLWDLRTAWPLSVIESHSEKVLCADWWKSDSVVSGGADSKL 74
            KWHD SWFHLLSASYDGKVMLWDLRTAWPLSVIESHS+KVL ADWWKSDSV+SGGADSKL
Sbjct: 359  KWHDQSWFHLLSASYDGKVMLWDLRTAWPLSVIESHSDKVLSADWWKSDSVISGGADSKL 418

Query: 73   CISSEIPVQ 47
            CISSEIPVQ
Sbjct: 419  CISSEIPVQ 427


>ref|XP_003516844.1| PREDICTED: ribosome biogenesis protein WDR12 homolog [Glycine max]
          Length = 435

 Score =  798 bits (2061), Expect = 0.0
 Identities = 381/435 (87%), Positives = 409/435 (94%)
 Frame = -3

Query: 1351 MGEESGEASARRIQVRFVTKLDEPLRVPPTAIAIPADLTRFGLSSLVNALLQSKNNDDDY 1172
            M EESGE SARR+QVRFVTKL EP +VP TAIAIPADL RFGLSSLVNALLQS  ND D+
Sbjct: 3    MNEESGEGSARRVQVRFVTKLGEPYKVPTTAIAIPADLARFGLSSLVNALLQS--NDADH 60

Query: 1171 KPEPFDFLIDGEFIRMSLDQFLLAKGISAERILEIEYTRVVAPRKEEDPSLHDDWVSAVD 992
            +PEPFDFLIDGEF+RMSL+QFLLAKGISAERILEIEY R VAPRKEEDPSLHDDWVSAVD
Sbjct: 61   QPEPFDFLIDGEFVRMSLEQFLLAKGISAERILEIEYARAVAPRKEEDPSLHDDWVSAVD 120

Query: 991  GSSSRFFLTGCYDGLGRVWKGAGLCTHMLEGHSDAVTSVSIINPKGVETVTLATASKDRT 812
            GSSSRFFLTGCYDGLGRVWKGAGLCTH+LEGHSDA+TSVSIINPKG ETVT+ATASKDRT
Sbjct: 121  GSSSRFFLTGCYDGLGRVWKGAGLCTHILEGHSDAITSVSIINPKGEETVTVATASKDRT 180

Query: 811  LRLWKINTDEAINHPMRVRAFKILRGHKSSVQSVAAQTNGEMVCSGSWDCTINLWQTNDF 632
            LRLWK+N  + +N+PMRVRA+KILRGHKSSVQ VA QT GEMVCS SWDCTINLWQTNDF
Sbjct: 181  LRLWKLNAGDHVNNPMRVRAYKILRGHKSSVQCVAVQTAGEMVCSASWDCTINLWQTNDF 240

Query: 631  NAEDDLVSKKRKVEGQVEDSQLEGEAFTTLVGHTQCVSSVVWPQRESIYSASWDHSVRKW 452
            NAEDDLVSKKRK+  QVE+SQLEGEAFTTLVGHTQCVS+VVWPQRESIYSASWDHS+RKW
Sbjct: 241  NAEDDLVSKKRKIGAQVEESQLEGEAFTTLVGHTQCVSAVVWPQRESIYSASWDHSIRKW 300

Query: 451  DVETGKNLSDIFCGKALNCLDIGGEGSALIAAGGSDPVLRIWDPRKPGSSAPVFQFASHT 272
            DVETGKNL+D+FCGK LNCLDIGGEGS LIAAGGSDPV+RIWDPRKPG+SAPVFQF+SH 
Sbjct: 301  DVETGKNLTDLFCGKVLNCLDIGGEGSTLIAAGGSDPVIRIWDPRKPGTSAPVFQFSSHM 360

Query: 271  SWISSCKWHDNSWFHLLSASYDGKVMLWDLRTAWPLSVIESHSEKVLCADWWKSDSVVSG 92
            SW+S+CKWHD SWFHLLSASYDGKVMLWDLRTAWPLSVIESHS+KVL ADWWKS+SV+SG
Sbjct: 361  SWVSACKWHDQSWFHLLSASYDGKVMLWDLRTAWPLSVIESHSDKVLSADWWKSNSVISG 420

Query: 91   GADSKLCISSEIPVQ 47
            GADSKLCISSEIPVQ
Sbjct: 421  GADSKLCISSEIPVQ 435


>ref|XP_003543948.1| PREDICTED: ribosome biogenesis protein WDR12 homolog [Glycine max]
          Length = 435

 Score =  795 bits (2054), Expect = 0.0
 Identities = 379/435 (87%), Positives = 408/435 (93%)
 Frame = -3

Query: 1351 MGEESGEASARRIQVRFVTKLDEPLRVPPTAIAIPADLTRFGLSSLVNALLQSKNNDDDY 1172
            M EESGE SARR+QVRFVTKL EP +VP TAIAIPADL R GLSSLVNALLQS  ND D+
Sbjct: 3    MNEESGEGSARRVQVRFVTKLGEPYKVPTTAIAIPADLARLGLSSLVNALLQS--NDADH 60

Query: 1171 KPEPFDFLIDGEFIRMSLDQFLLAKGISAERILEIEYTRVVAPRKEEDPSLHDDWVSAVD 992
            +PEPFDFLIDGEF+RMSL+QFLLAKGISAERILEIEY R VAPRKEEDPSLHDDWVSAVD
Sbjct: 61   QPEPFDFLIDGEFVRMSLEQFLLAKGISAERILEIEYARAVAPRKEEDPSLHDDWVSAVD 120

Query: 991  GSSSRFFLTGCYDGLGRVWKGAGLCTHMLEGHSDAVTSVSIINPKGVETVTLATASKDRT 812
            GSSSRFFLTGCYDGLGRVWKGAGLCTH+LEGHSDA+TS+SIINPKG ETVT+ATASKDRT
Sbjct: 121  GSSSRFFLTGCYDGLGRVWKGAGLCTHILEGHSDAITSISIINPKGEETVTVATASKDRT 180

Query: 811  LRLWKINTDEAINHPMRVRAFKILRGHKSSVQSVAAQTNGEMVCSGSWDCTINLWQTNDF 632
            LRLWK+N  + +N+PMRVRA+KILRGHKSSVQ VA QT GEMVCS SWDCTINLWQTNDF
Sbjct: 181  LRLWKLNAGDHVNNPMRVRAYKILRGHKSSVQCVAVQTAGEMVCSASWDCTINLWQTNDF 240

Query: 631  NAEDDLVSKKRKVEGQVEDSQLEGEAFTTLVGHTQCVSSVVWPQRESIYSASWDHSVRKW 452
            NAEDDLVSKKRK+  QVE+SQLEGEAFTTLVGHTQCVS+VVWPQRESIYSASWDHS+RKW
Sbjct: 241  NAEDDLVSKKRKIGAQVEESQLEGEAFTTLVGHTQCVSAVVWPQRESIYSASWDHSIRKW 300

Query: 451  DVETGKNLSDIFCGKALNCLDIGGEGSALIAAGGSDPVLRIWDPRKPGSSAPVFQFASHT 272
            DVETGKNL+D+FCGK LNCLDIGGEGS LIAAGGSDPV+RIWDPRKPG+SAPVFQF+SH 
Sbjct: 301  DVETGKNLTDLFCGKVLNCLDIGGEGSTLIAAGGSDPVIRIWDPRKPGTSAPVFQFSSHM 360

Query: 271  SWISSCKWHDNSWFHLLSASYDGKVMLWDLRTAWPLSVIESHSEKVLCADWWKSDSVVSG 92
            SW+S+CKWHD SWFHLLSASYDGKVMLWDLRTAWPLSVIESHS+KVL ADWWKS+SV+SG
Sbjct: 361  SWVSACKWHDQSWFHLLSASYDGKVMLWDLRTAWPLSVIESHSDKVLSADWWKSNSVISG 420

Query: 91   GADSKLCISSEIPVQ 47
            GADSKLCISSEIPVQ
Sbjct: 421  GADSKLCISSEIPVQ 435


>ref|XP_003554839.1| PREDICTED: ribosome biogenesis protein WDR12 homolog [Glycine max]
          Length = 435

 Score =  793 bits (2049), Expect = 0.0
 Identities = 381/435 (87%), Positives = 410/435 (94%)
 Frame = -3

Query: 1351 MGEESGEASARRIQVRFVTKLDEPLRVPPTAIAIPADLTRFGLSSLVNALLQSKNNDDDY 1172
            M EES E SARRIQVRFVTKL EP +VP TAIAIPADL RFGLSSLVNALLQS  ND D+
Sbjct: 3    MNEESVEGSARRIQVRFVTKLGEPYKVPTTAIAIPADLARFGLSSLVNALLQS--NDADH 60

Query: 1171 KPEPFDFLIDGEFIRMSLDQFLLAKGISAERILEIEYTRVVAPRKEEDPSLHDDWVSAVD 992
            + EPFDFLIDGEF+RMSL+QFLLAKGISAERILEIEYTR VAPRKEEDPSLHDDWVSAVD
Sbjct: 61   QLEPFDFLIDGEFVRMSLEQFLLAKGISAERILEIEYTRAVAPRKEEDPSLHDDWVSAVD 120

Query: 991  GSSSRFFLTGCYDGLGRVWKGAGLCTHMLEGHSDAVTSVSIINPKGVETVTLATASKDRT 812
            GSSSRFFLTGCYDGLGRVWKGAGLCTH+LEGHSDAVTSVSIINPKG ET+T+ATASKDRT
Sbjct: 121  GSSSRFFLTGCYDGLGRVWKGAGLCTHILEGHSDAVTSVSIINPKGEETITVATASKDRT 180

Query: 811  LRLWKINTDEAINHPMRVRAFKILRGHKSSVQSVAAQTNGEMVCSGSWDCTINLWQTNDF 632
            LRLWK+N +  +N+PMRVRA+KI RGHKSSV  VAAQT+GEMVCS SWDCTINLWQTNDF
Sbjct: 181  LRLWKLNAEGPVNNPMRVRAYKIFRGHKSSVNCVAAQTSGEMVCSASWDCTINLWQTNDF 240

Query: 631  NAEDDLVSKKRKVEGQVEDSQLEGEAFTTLVGHTQCVSSVVWPQRESIYSASWDHSVRKW 452
            NAEDDLVSKKRK+  QVE+SQLEGEAFTTLVGHTQCVS+VVWPQ+ESIYSASWDHS+RKW
Sbjct: 241  NAEDDLVSKKRKIGAQVEESQLEGEAFTTLVGHTQCVSAVVWPQQESIYSASWDHSIRKW 300

Query: 451  DVETGKNLSDIFCGKALNCLDIGGEGSALIAAGGSDPVLRIWDPRKPGSSAPVFQFASHT 272
            DVETGKNL+D+FCGK LNCLDIGGEGSALIAAGGSDPV+RIWDPRKPG+SAPVFQF+SHT
Sbjct: 301  DVETGKNLTDLFCGKVLNCLDIGGEGSALIAAGGSDPVIRIWDPRKPGTSAPVFQFSSHT 360

Query: 271  SWISSCKWHDNSWFHLLSASYDGKVMLWDLRTAWPLSVIESHSEKVLCADWWKSDSVVSG 92
            SWIS+CKWHD SWFHLLSASYDGKVMLWDLRTAWPLSVIESHS+KVL ADWWKS+SV+SG
Sbjct: 361  SWISACKWHDQSWFHLLSASYDGKVMLWDLRTAWPLSVIESHSDKVLSADWWKSNSVISG 420

Query: 91   GADSKLCISSEIPVQ 47
            GADSKLCISSEIPV+
Sbjct: 421  GADSKLCISSEIPVK 435


>gb|ACJ85096.1| unknown [Medicago truncatula] gi|388520005|gb|AFK48064.1| unknown
            [Medicago truncatula]
          Length = 435

 Score =  783 bits (2022), Expect = 0.0
 Identities = 374/433 (86%), Positives = 406/433 (93%)
 Frame = -3

Query: 1345 EESGEASARRIQVRFVTKLDEPLRVPPTAIAIPADLTRFGLSSLVNALLQSKNNDDDYKP 1166
            E++GE+S RRIQVRFVT L EP +VP +AIAIP DLTRFGLSSLVNALLQSK  D+D+K 
Sbjct: 5    EDNGESSTRRIQVRFVTSLPEPFKVPSSAIAIPVDLTRFGLSSLVNALLQSK--DEDHKS 62

Query: 1165 EPFDFLIDGEFIRMSLDQFLLAKGISAERILEIEYTRVVAPRKEEDPSLHDDWVSAVDGS 986
            EPFDFLIDGEF+RMSL+ FLLAKGISAERILEIEY R VAPRKEEDPSLHDDWVSAVDGS
Sbjct: 63   EPFDFLIDGEFVRMSLEDFLLAKGISAERILEIEYIRSVAPRKEEDPSLHDDWVSAVDGS 122

Query: 985  SSRFFLTGCYDGLGRVWKGAGLCTHMLEGHSDAVTSVSIINPKGVETVTLATASKDRTLR 806
            SSRF LTGCYDG GRVW+GAGLCTH+LEGHSD VTSVS+INP+GVETVTLATASKDRTLR
Sbjct: 123  SSRFILTGCYDGFGRVWEGAGLCTHILEGHSDGVTSVSVINPEGVETVTLATASKDRTLR 182

Query: 805  LWKINTDEAINHPMRVRAFKILRGHKSSVQSVAAQTNGEMVCSGSWDCTINLWQTNDFNA 626
            LWKINT+EA NHP RVRA+KILRGHKSSVQSVAAQTNGEM+CSGSWDCTINLWQ ND NA
Sbjct: 183  LWKINTEEATNHPARVRAYKILRGHKSSVQSVAAQTNGEMICSGSWDCTINLWQINDTNA 242

Query: 625  EDDLVSKKRKVEGQVEDSQLEGEAFTTLVGHTQCVSSVVWPQRESIYSASWDHSVRKWDV 446
            E+DLVSKKRKV+G+VEDSQLEGEAFTTLVGHTQCVSSV+WPQRESIYSASWDHS+RKWDV
Sbjct: 243  ENDLVSKKRKVDGRVEDSQLEGEAFTTLVGHTQCVSSVIWPQRESIYSASWDHSIRKWDV 302

Query: 445  ETGKNLSDIFCGKALNCLDIGGEGSALIAAGGSDPVLRIWDPRKPGSSAPVFQFASHTSW 266
            E GKN++DIFCGKALNCLDIGGE SALIA GGSDPV+RIWDPRKPG+SAPVFQFASHTSW
Sbjct: 303  EKGKNVTDIFCGKALNCLDIGGESSALIAVGGSDPVVRIWDPRKPGTSAPVFQFASHTSW 362

Query: 265  ISSCKWHDNSWFHLLSASYDGKVMLWDLRTAWPLSVIESHSEKVLCADWWKSDSVVSGGA 86
            +++ KWHD S FHLLSASYDGKVMLWDLRTAWPLS IESHS+KV CADWWKSDSV+SGGA
Sbjct: 363  VTTVKWHDKSLFHLLSASYDGKVMLWDLRTAWPLSTIESHSDKVPCADWWKSDSVISGGA 422

Query: 85   DSKLCISSEIPVQ 47
            DSKLCISS+IP+Q
Sbjct: 423  DSKLCISSQIPLQ 435


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