BLASTX nr result

ID: Glycyrrhiza23_contig00018480 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00018480
         (359 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002527858.1| chloride channel clc, putative [Ricinus comm...   172   3e-41
ref|XP_004155280.1| PREDICTED: chloride channel protein CLC-c-li...   169   3e-40
ref|XP_004133730.1| PREDICTED: chloride channel protein CLC-c-li...   169   3e-40
ref|XP_004133731.1| PREDICTED: chloride channel protein CLC-c-li...   169   3e-40
ref|XP_002331119.1| Cl-channel clc-7 [Populus trichocarpa] gi|22...   167   1e-39

>ref|XP_002527858.1| chloride channel clc, putative [Ricinus communis]
           gi|223532782|gb|EEF34561.1| chloride channel clc,
           putative [Ricinus communis]
          Length = 754

 Score =  172 bits (436), Expect = 3e-41
 Identities = 80/102 (78%), Positives = 92/102 (90%)
 Frame = +2

Query: 5   CPTVGRSGHYKNFQCPPNHYNDLASLFFTTNDDSIRNLFVAGSDKRFMLSSLVIFFVAVY 184
           CPT GRSG++KNFQCP NHYNDLASLFF TNDD+IRNLF +GS+K F +S+L++FFVAVY
Sbjct: 390 CPTKGRSGNFKNFQCPSNHYNDLASLFFNTNDDAIRNLFTSGSEKSFQVSTLLVFFVAVY 449

Query: 185 FLGIVTYGIAIPSGLFIPVILAGASYGRVVGSLLSPFTVLDV 310
           FLGI+TYGIAIPSGLFIPVILAGASYGR+VG LL P + LDV
Sbjct: 450 FLGIITYGIAIPSGLFIPVILAGASYGRLVGKLLGPISDLDV 491


>ref|XP_004155280.1| PREDICTED: chloride channel protein CLC-c-like [Cucumis sativus]
          Length = 598

 Score =  169 bits (427), Expect = 3e-40
 Identities = 77/103 (74%), Positives = 88/103 (85%)
 Frame = +2

Query: 2   ECPTVGRSGHYKNFQCPPNHYNDLASLFFTTNDDSIRNLFVAGSDKRFMLSSLVIFFVAV 181
           +CPTVGRSG+YKNFQCPP HYNDLASLFF TNDD+IRNLF + +DK F LSSL +FFV++
Sbjct: 233 QCPTVGRSGNYKNFQCPPGHYNDLASLFFNTNDDAIRNLFTSANDKHFQLSSLFVFFVSI 292

Query: 182 YFLGIVTYGIAIPSGLFIPVILAGASYGRVVGSLLSPFTVLDV 310
           Y LGI+TYGIA+PSGLFIPVILAGASYGR+VG L      LDV
Sbjct: 293 YCLGIITYGIAVPSGLFIPVILAGASYGRIVGRLFGSVATLDV 335


>ref|XP_004133730.1| PREDICTED: chloride channel protein CLC-c-like isoform 1 [Cucumis
           sativus]
          Length = 789

 Score =  169 bits (427), Expect = 3e-40
 Identities = 77/103 (74%), Positives = 88/103 (85%)
 Frame = +2

Query: 2   ECPTVGRSGHYKNFQCPPNHYNDLASLFFTTNDDSIRNLFVAGSDKRFMLSSLVIFFVAV 181
           +CPTVGRSG+YKNFQCPP HYNDLASLFF TNDD+IRNLF + +DK F LSSL +FFV++
Sbjct: 424 QCPTVGRSGNYKNFQCPPGHYNDLASLFFNTNDDAIRNLFTSANDKHFQLSSLFVFFVSI 483

Query: 182 YFLGIVTYGIAIPSGLFIPVILAGASYGRVVGSLLSPFTVLDV 310
           Y LGI+TYGIA+PSGLFIPVILAGASYGR+VG L      LDV
Sbjct: 484 YCLGIITYGIAVPSGLFIPVILAGASYGRIVGRLFGSVATLDV 526


>ref|XP_004133731.1| PREDICTED: chloride channel protein CLC-c-like isoform 2 [Cucumis
           sativus] gi|386649467|gb|AFJ15539.1| chloride channel c
           [Cucumis sativus]
          Length = 718

 Score =  169 bits (427), Expect = 3e-40
 Identities = 77/103 (74%), Positives = 88/103 (85%)
 Frame = +2

Query: 2   ECPTVGRSGHYKNFQCPPNHYNDLASLFFTTNDDSIRNLFVAGSDKRFMLSSLVIFFVAV 181
           +CPTVGRSG+YKNFQCPP HYNDLASLFF TNDD+IRNLF + +DK F LSSL +FFV++
Sbjct: 353 QCPTVGRSGNYKNFQCPPGHYNDLASLFFNTNDDAIRNLFTSANDKHFQLSSLFVFFVSI 412

Query: 182 YFLGIVTYGIAIPSGLFIPVILAGASYGRVVGSLLSPFTVLDV 310
           Y LGI+TYGIA+PSGLFIPVILAGASYGR+VG L      LDV
Sbjct: 413 YCLGIITYGIAVPSGLFIPVILAGASYGRIVGRLFGSVATLDV 455


>ref|XP_002331119.1| Cl-channel clc-7 [Populus trichocarpa] gi|222872847|gb|EEF09978.1|
           Cl-channel clc-7 [Populus trichocarpa]
          Length = 743

 Score =  167 bits (422), Expect = 1e-39
 Identities = 75/102 (73%), Positives = 91/102 (89%)
 Frame = +2

Query: 2   ECPTVGRSGHYKNFQCPPNHYNDLASLFFTTNDDSIRNLFVAGSDKRFMLSSLVIFFVAV 181
           +CPT GRSG++KNFQCPPNHYNDLASL F TNDD+IRNLF +GS+K F LS+L++FF A+
Sbjct: 378 KCPTEGRSGNFKNFQCPPNHYNDLASLVFNTNDDAIRNLFTSGSEKEFHLSTLIVFFFAI 437

Query: 182 YFLGIVTYGIAIPSGLFIPVILAGASYGRVVGSLLSPFTVLD 307
           Y LGIVTYGIA+PSGLFIPVILAGASYGR++G++L P + LD
Sbjct: 438 YCLGIVTYGIAVPSGLFIPVILAGASYGRLIGTMLGPLSNLD 479


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