BLASTX nr result

ID: Glycyrrhiza23_contig00018459 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00018459
         (426 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003547364.1| PREDICTED: uncharacterized protein LOC100818...   241   4e-62
ref|XP_003534819.1| PREDICTED: uncharacterized protein LOC100819...   234   5e-60
ref|XP_002519206.1| WD-repeat protein, putative [Ricinus communi...   231   5e-59
emb|CBI22898.3| unnamed protein product [Vitis vinifera]              229   1e-58
emb|CAN66736.1| hypothetical protein VITISV_024187 [Vitis vinifera]   229   2e-58

>ref|XP_003547364.1| PREDICTED: uncharacterized protein LOC100818665 [Glycine max]
          Length = 1773

 Score =  241 bits (615), Expect = 4e-62
 Identities = 119/146 (81%), Positives = 126/146 (86%), Gaps = 5/146 (3%)
 Frame = -2

Query: 425 GHEGDITDXXXXXXXXXXXXXXNDCIIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPNAV 246
           GH+GDITD              NDC+IRVWRLPDGLPISVLRGHTGAVTAIAFSPRPNAV
Sbjct: 280 GHDGDITDLAVSSNNALVASSSNDCVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPNAV 339

Query: 245 YQLLSSSDDGTCRIWDARYTQSSPRLYIPRPSDS-FGRNSGPSSSTLPQSHQIFCCAFNA 69
           YQLLSSSDDGTCRIWDARYTQSSPRLY+PRPSDS  G+++GPSSST+PQSHQIFCCAFNA
Sbjct: 340 YQLLSSSDDGTCRIWDARYTQSSPRLYVPRPSDSVIGKSNGPSSSTVPQSHQIFCCAFNA 399

Query: 68  NGTVFVTGSSDNLAR----VWNACKL 3
           NGTVFVTGSSDNLAR    VWNACKL
Sbjct: 400 NGTVFVTGSSDNLARVFLQVWNACKL 425


>ref|XP_003534819.1| PREDICTED: uncharacterized protein LOC100819598 [Glycine max]
          Length = 1777

 Score =  234 bits (597), Expect = 5e-60
 Identities = 117/146 (80%), Positives = 124/146 (84%), Gaps = 5/146 (3%)
 Frame = -2

Query: 425 GHEGDITDXXXXXXXXXXXXXXNDCIIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPNAV 246
           GH+GDITD              NDC+IRVWRLPDGLPISVLRGHTGAVTAIAFSPR NA+
Sbjct: 280 GHDGDITDLAVSSNNALVASSSNDCVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRLNAL 339

Query: 245 YQLLSSSDDGTCRIWDARYTQSSPRLYIPRPSDS-FGRNSGPSSSTLPQSHQIFCCAFNA 69
           YQLLSSSDDGTCRIWDARYTQSSPRLY+PRPSDS  G++SGPSSST+PQS QIFCCAFNA
Sbjct: 340 YQLLSSSDDGTCRIWDARYTQSSPRLYVPRPSDSVIGKSSGPSSSTVPQSRQIFCCAFNA 399

Query: 68  NGTVFVTGSSDNLAR----VWNACKL 3
           NGTVFVTGSSDNLAR    VWNACKL
Sbjct: 400 NGTVFVTGSSDNLARVFLQVWNACKL 425


>ref|XP_002519206.1| WD-repeat protein, putative [Ricinus communis]
           gi|223541521|gb|EEF43070.1| WD-repeat protein, putative
           [Ricinus communis]
          Length = 1519

 Score =  231 bits (589), Expect = 5e-59
 Identities = 114/141 (80%), Positives = 119/141 (84%), Gaps = 1/141 (0%)
 Frame = -2

Query: 425 GHEGDITDXXXXXXXXXXXXXXNDCIIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPNAV 246
           GHEGDITD              NDCIIRVWRLPDGLPISVLRGHTGAVTAIAFSPRP +V
Sbjct: 292 GHEGDITDLAVSSNNTLVASASNDCIIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPGSV 351

Query: 245 YQLLSSSDDGTCRIWDARYTQSSPRLYIPRPSDSF-GRNSGPSSSTLPQSHQIFCCAFNA 69
           YQLLSSSDDGTCRIWDARY+  SPRLYIPRP DS  G+NSG SSS+ PQ+HQIFCCAFNA
Sbjct: 352 YQLLSSSDDGTCRIWDARYSNFSPRLYIPRPLDSLAGKNSGASSSSGPQTHQIFCCAFNA 411

Query: 68  NGTVFVTGSSDNLARVWNACK 6
           NGTVFVTGSSDNLARVWNACK
Sbjct: 412 NGTVFVTGSSDNLARVWNACK 432


>emb|CBI22898.3| unnamed protein product [Vitis vinifera]
          Length = 1569

 Score =  229 bits (585), Expect = 1e-58
 Identities = 112/141 (79%), Positives = 119/141 (84%), Gaps = 1/141 (0%)
 Frame = -2

Query: 425 GHEGDITDXXXXXXXXXXXXXXNDCIIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPNAV 246
           GHEGDITD              NDCIIRVWRLPDGLPISVLRGHTGAVTAIAFSPRP++V
Sbjct: 283 GHEGDITDLAVSSNNALVASSSNDCIIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSSV 342

Query: 245 YQLLSSSDDGTCRIWDARYTQSSPRLYIPRPSDSF-GRNSGPSSSTLPQSHQIFCCAFNA 69
           YQLLSSSDDGTCRIWDARY+Q SPR+Y+PRP DS  G+N+ PSSS  PQSHQIFCCAFNA
Sbjct: 343 YQLLSSSDDGTCRIWDARYSQFSPRIYVPRPPDSIAGKNNVPSSSNGPQSHQIFCCAFNA 402

Query: 68  NGTVFVTGSSDNLARVWNACK 6
           NGTVFVTGSSD LARVWNACK
Sbjct: 403 NGTVFVTGSSDTLARVWNACK 423


>emb|CAN66736.1| hypothetical protein VITISV_024187 [Vitis vinifera]
          Length = 434

 Score =  229 bits (584), Expect = 2e-58
 Identities = 112/141 (79%), Positives = 119/141 (84%), Gaps = 1/141 (0%)
 Frame = -2

Query: 425 GHEGDITDXXXXXXXXXXXXXXNDCIIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPNAV 246
           GHEGDITD              NDCIIRVWRLPDGLPISVLRGHTGAVTAIAFSPRP++V
Sbjct: 283 GHEGDITDLAVSSNNALVASSSNDCIIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSSV 342

Query: 245 YQLLSSSDDGTCRIWDARYTQSSPRLYIPRPSDSF-GRNSGPSSSTLPQSHQIFCCAFNA 69
           YQLLSSSDDGTCRIWDARY+Q SPR+Y+PRP DS  G+N+ PSSS  PQSHQIFCCAFNA
Sbjct: 343 YQLLSSSDDGTCRIWDARYSQFSPRIYVPRPPDSXAGKNNVPSSSNGPQSHQIFCCAFNA 402

Query: 68  NGTVFVTGSSDNLARVWNACK 6
           NGTVFVTGSSD LARVWNACK
Sbjct: 403 NGTVFVTGSSDTLARVWNACK 423


Top