BLASTX nr result

ID: Glycyrrhiza23_contig00018458 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00018458
         (1067 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003526921.1| PREDICTED: U5 small nuclear ribonucleoprotei...   331   6e-93
ref|XP_003522451.1| PREDICTED: uncharacterized protein LOC100798...   314   5e-88
ref|XP_003602749.1| WD repeat-containing protein, putative [Medi...   281   3e-77
ref|XP_002280902.1| PREDICTED: uncharacterized WD repeat-contain...   230   3e-63
ref|XP_004145140.1| PREDICTED: uncharacterized protein LOC101220...   223   5e-61

>ref|XP_003526921.1| PREDICTED: U5 small nuclear ribonucleoprotein 40 kDa protein-like
           [Glycine max]
          Length = 533

 Score =  331 bits (848), Expect(2) = 6e-93
 Identities = 188/259 (72%), Positives = 209/259 (80%), Gaps = 6/259 (2%)
 Frame = -3

Query: 813 EEQNGSTSREEQEEALVALIEHRTREVNNLRHRLSYYQSQLEEAEKRLQDSESKLARLRG 634
           EE  GSTSREEQEEALVALIEHRT EV NLRHR++YY++QL+EAEKRLQDSESKLARLRG
Sbjct: 5   EENGGSTSREEQEEALVALIEHRTHEVKNLRHRIAYYKTQLDEAEKRLQDSESKLARLRG 64

Query: 633 QTKLTNAVSSRSSLALEDGVRAVKTERRSNSPVGFDRNEGSSKNNTQSNKPELVIPALTP 454
           QT     VSSRS+L  +DG++ +KTERRSNSP+  DRNEGS+KN  QS KPEL+IP+  P
Sbjct: 65  QT-----VSSRSTL--DDGIKTLKTERRSNSPI--DRNEGSTKNRHQS-KPELLIPSANP 114

Query: 453 KVVSPPVLLPRXXXXXXXXXXXXXXA---TPPVTGG---GKSDKSHSHNRLSSEQQNVES 292
           K+ S PVLLP+                  + P+TGG   GKSDKSHS NRLSSEQQ  E 
Sbjct: 115 KI-SQPVLLPKSFSKASITSSSEATPGVHSSPITGGSSRGKSDKSHS-NRLSSEQQKTEV 172

Query: 291 NKDKGTKRKFEQKEHKELIPLIRKSSSPSLVHCQTSNHISSQHKRKLRSIALCPVNDQLF 112
            K+KGTKRKFEQKEHKELIPLIRKSSSPSLV CQTSNHISSQHKRKLRSIALCPVNDQLF
Sbjct: 173 -KEKGTKRKFEQKEHKELIPLIRKSSSPSLVTCQTSNHISSQHKRKLRSIALCPVNDQLF 231

Query: 111 VTSALDGVVNLWQVQARGS 55
           VTSALDGVVN WQVQA+G+
Sbjct: 232 VTSALDGVVNFWQVQAKGA 250



 Score = 37.7 bits (86), Expect(2) = 6e-93
 Identities = 16/19 (84%), Positives = 16/19 (84%)
 Frame = -1

Query: 59  GASLLSTTDCVSPKQRRWP 3
           GAS LSTTDC S KQRRWP
Sbjct: 251 GASRLSTTDCASQKQRRWP 269


>ref|XP_003522451.1| PREDICTED: uncharacterized protein LOC100798141 [Glycine max]
          Length = 1494

 Score =  314 bits (805), Expect(2) = 5e-88
 Identities = 181/259 (69%), Positives = 204/259 (78%), Gaps = 6/259 (2%)
 Frame = -3

Query: 813 EEQNGSTSREEQEEALVALIEHRTREVNNLRHRLSYYQSQLEEAEKRLQDSESKLARLRG 634
           EE  GSTSREEQEEALVALIEHRT EV NLRHR++YY++QL+EAEKRLQDSESKLARLRG
Sbjct: 5   EENGGSTSREEQEEALVALIEHRTHEVKNLRHRIAYYKTQLDEAEKRLQDSESKLARLRG 64

Query: 633 QTKLTNAVSSRSSLALEDGVRAVKTERRSNSPVGFDRNEGSSKNNTQSNKPELVIPALTP 454
           QT     VSSRS+L  +DG+  +KT+ RS+SP+  DRNE S+K+  QS KPEL+IP+L P
Sbjct: 65  QT-----VSSRSTL--DDGIETLKTKSRSSSPI--DRNEVSTKSQHQS-KPELLIPSLNP 114

Query: 453 KVVSPPVLLPRXXXXXXXXXXXXXXA---TPPVTGG---GKSDKSHSHNRLSSEQQNVES 292
           K+ S PVLLP+                    P+TGG   GKSDKS S NRLSSEQQ  E 
Sbjct: 115 KI-SQPVLLPKSSSKASITSSSEATPGVHNSPITGGSSRGKSDKSQS-NRLSSEQQKTEV 172

Query: 291 NKDKGTKRKFEQKEHKELIPLIRKSSSPSLVHCQTSNHISSQHKRKLRSIALCPVNDQLF 112
            K+KGTKRKFEQK HKELIPL+RKSSSPSLV CQTSNHISSQHKRKLRSIALCPVNDQLF
Sbjct: 173 -KEKGTKRKFEQKGHKELIPLVRKSSSPSLVTCQTSNHISSQHKRKLRSIALCPVNDQLF 231

Query: 111 VTSALDGVVNLWQVQARGS 55
           VTSALDGVVN WQVQA+G+
Sbjct: 232 VTSALDGVVNFWQVQAKGA 250



 Score = 37.7 bits (86), Expect(2) = 5e-88
 Identities = 16/19 (84%), Positives = 16/19 (84%)
 Frame = -1

Query: 59  GASLLSTTDCVSPKQRRWP 3
           GAS LSTTDC S KQRRWP
Sbjct: 251 GASRLSTTDCASQKQRRWP 269


>ref|XP_003602749.1| WD repeat-containing protein, putative [Medicago truncatula]
           gi|355491797|gb|AES73000.1| WD repeat-containing
           protein, putative [Medicago truncatula]
          Length = 517

 Score =  281 bits (719), Expect(2) = 3e-77
 Identities = 166/257 (64%), Positives = 187/257 (72%), Gaps = 2/257 (0%)
 Frame = -3

Query: 819 MEEEQNGSTSREEQEEALVALIEHRTREVNNLRHRLSYYQSQLEEAEKRLQDSESKLARL 640
           MEEE    TSREEQEEALVALIEHRTREVNNLRHRL+Y ++QL++AEKRL+DSESKLARL
Sbjct: 1   MEEEDIEITSREEQEEALVALIEHRTREVNNLRHRLAYTKNQLDDAEKRLKDSESKLARL 60

Query: 639 RGQT--KLTNAVSSRSSLALEDGVRAVKTERRSNSPVGFDRNEGSSKNNTQSNKPELVIP 466
           RGQT  K+TN+         ++G  AVK ERRSNSP+  DRNE S K+N QS K ELVIP
Sbjct: 61  RGQTTKKITNSDD-------DNGTVAVKKERRSNSPI--DRNERSYKSNKQS-KTELVIP 110

Query: 465 ALTPKVVSPPVLLPRXXXXXXXXXXXXXXATPPVTGGGKSDKSHSHNRLSSEQQNVESNK 286
           A+TPK+        R                     GGKS KS        +QQNVE  K
Sbjct: 111 AVTPKI-------SRSSGKGSVSEVAVSSVHTSSVSGGKSVKS------KIDQQNVEG-K 156

Query: 285 DKGTKRKFEQKEHKELIPLIRKSSSPSLVHCQTSNHISSQHKRKLRSIALCPVNDQLFVT 106
           DKGTKRKFEQKEH+ELIPLIRKSSS +LVHCQ+SNHISSQHKRKLRSIALCP NDQLF T
Sbjct: 157 DKGTKRKFEQKEHQELIPLIRKSSSKNLVHCQSSNHISSQHKRKLRSIALCPANDQLFAT 216

Query: 105 SALDGVVNLWQVQARGS 55
           SALDG+VN W+VQA+GS
Sbjct: 217 SALDGLVNFWKVQAKGS 233



 Score = 35.0 bits (79), Expect(2) = 3e-77
 Identities = 14/18 (77%), Positives = 16/18 (88%)
 Frame = -1

Query: 56  ASLLSTTDCVSPKQRRWP 3
           ASLL++TDC S KQRRWP
Sbjct: 235 ASLLNSTDCASQKQRRWP 252


>ref|XP_002280902.1| PREDICTED: uncharacterized WD repeat-containing protein alr3466
           [Vitis vinifera] gi|297734510|emb|CBI15757.3| unnamed
           protein product [Vitis vinifera]
          Length = 526

 Score =  230 bits (587), Expect(2) = 3e-63
 Identities = 136/256 (53%), Positives = 168/256 (65%)
 Frame = -3

Query: 822 IMEEEQNGSTSREEQEEALVALIEHRTREVNNLRHRLSYYQSQLEEAEKRLQDSESKLAR 643
           I  EE     SR+EQEEALVALIEHRT+EV ++R R++YYQSQL+EAEK+L DS+++L R
Sbjct: 14  ITTEEDGEENSRDEQEEALVALIEHRTKEVEHIRKRITYYQSQLQEAEKKLLDSQAQLGR 73

Query: 642 LRGQTKLTNAVSSRSSLALEDGVRAVKTERRSNSPVGFDRNEGSSKNNTQSNKPELVIPA 463
           LR +    N VSSRS L  ++G + VK ERRS SP+               ++PEL+IPA
Sbjct: 74  LRSKD---NLVSSRSPL--DNGTKKVKVERRSTSPLQLQ------------SRPELLIPA 116

Query: 462 LTPKVVSPPVLLPRXXXXXXXXXXXXXXATPPVTGGGKSDKSHSHNRLSSEQQNVESNKD 283
           + PK+  P  L                       G  K +KSH     SSE++ VE  +D
Sbjct: 117 VNPKISQPVKLADAGTRARSPTPNHAHS-----VGKVKWEKSHGS---SSEREMVEV-QD 167

Query: 282 KGTKRKFEQKEHKELIPLIRKSSSPSLVHCQTSNHISSQHKRKLRSIALCPVNDQLFVTS 103
           KGTKRKFE KEHKELI  I  SSSP +V C +S+HISSQHKRKLRS+ LCPVN+QLF TS
Sbjct: 168 KGTKRKFEPKEHKELITSIATSSSPVIVRCYSSSHISSQHKRKLRSLVLCPVNNQLFATS 227

Query: 102 ALDGVVNLWQVQARGS 55
           ALDG+VNLWQ+QARGS
Sbjct: 228 ALDGIVNLWQIQARGS 243



 Score = 38.9 bits (89), Expect(2) = 3e-63
 Identities = 17/22 (77%), Positives = 18/22 (81%)
 Frame = -1

Query: 68  RLGGASLLSTTDCVSPKQRRWP 3
           R  GASLLS TDC+S KQRRWP
Sbjct: 241 RGSGASLLSATDCLSQKQRRWP 262


>ref|XP_004145140.1| PREDICTED: uncharacterized protein LOC101220523 [Cucumis sativus]
           gi|449473874|ref|XP_004154008.1| PREDICTED:
           uncharacterized protein LOC101207060 [Cucumis sativus]
           gi|449523433|ref|XP_004168728.1| PREDICTED:
           uncharacterized LOC101207060 [Cucumis sativus]
          Length = 524

 Score =  223 bits (567), Expect(2) = 5e-61
 Identities = 138/255 (54%), Positives = 163/255 (63%), Gaps = 2/255 (0%)
 Frame = -3

Query: 813 EEQNGSTSREEQEEALVALIEHRTREVNNLRHRLSYYQSQLEEAEKRLQDSESKLARLRG 634
           E+ +G TS+EEQEEALVALI+HR  EV NL+HR+SYY SQLEEA+KRLQD+ESKLARLR 
Sbjct: 6   EDIDGITSKEEQEEALVALIDHRCHEVQNLKHRVSYYTSQLEEAQKRLQDTESKLARLRR 65

Query: 633 QTKLTNAVSSRSSLALEDGVRAVKTERRSNSPVGFDRNEGSSKNNTQSNKPELVIPALTP 454
           Q+   NAVSS+ SL       +VK E+  N        EGS       +KPELVIPA+ P
Sbjct: 66  QS---NAVSSKDSL--RSRAVSVKVEQTVN--------EGSRPQPV--SKPELVIPAVVP 110

Query: 453 KVVSPPVLLPRXXXXXXXXXXXXXXATPPVTGGGKSDKSHSHNRLSSEQQNVESNKDKGT 274
           K      L                 +        + DK+  +  L    +   +  D+GT
Sbjct: 111 KTSQNSALAGNGAKASNSSRAQSSPSHIKNVVKVEGDKNIGNTSL----RETSNTPDRGT 166

Query: 273 KRKFEQ--KEHKELIPLIRKSSSPSLVHCQTSNHISSQHKRKLRSIALCPVNDQLFVTSA 100
           KRK EQ  KEHKELIPLIR SSSPS + C  SNHISSQHKRKLRS+  CPVN+QLFVTSA
Sbjct: 167 KRKLEQQFKEHKELIPLIRSSSSPSQIRCVGSNHISSQHKRKLRSLISCPVNEQLFVTSA 226

Query: 99  LDGVVNLWQVQARGS 55
           LDGVVNLWQ+QARGS
Sbjct: 227 LDGVVNLWQLQARGS 241



 Score = 39.3 bits (90), Expect(2) = 5e-61
 Identities = 17/22 (77%), Positives = 18/22 (81%)
 Frame = -1

Query: 68  RLGGASLLSTTDCVSPKQRRWP 3
           R   ASLLS+ DCVSPKQRRWP
Sbjct: 239 RGSSASLLSSADCVSPKQRRWP 260


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