BLASTX nr result

ID: Glycyrrhiza23_contig00018432 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00018432
         (1632 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003544224.1| PREDICTED: RING-H2 finger protein ATL54-like...   352   2e-94
ref|XP_003518241.1| PREDICTED: RING-H2 finger protein ATL54-like...   342   2e-91
ref|XP_003615188.1| RING-H2 finger protein ATL1O [Medicago trunc...   313   8e-83
gb|ACU20486.1| unknown [Glycine max]                                  279   1e-72
ref|XP_002301077.1| predicted protein [Populus trichocarpa] gi|2...   252   2e-64

>ref|XP_003544224.1| PREDICTED: RING-H2 finger protein ATL54-like [Glycine max]
          Length = 381

 Score =  352 bits (903), Expect = 2e-94
 Identities = 212/400 (53%), Positives = 237/400 (59%), Gaps = 32/400 (8%)
 Frame = +1

Query: 67   MARIHRKLFPAET-TTNQTLNCYGFCDPPCPSNCYTNPDYYFFSXXXXXXQHS-----NH 228
            MA  HRKLFP ET TTNQT +CYGFCDP CP NCY NPDY+F          S     NH
Sbjct: 1    MASKHRKLFPDETATTNQTQDCYGFCDPACPYNCYNNPDYFFSPPPPPPPSISHSSQVNH 60

Query: 229  XXXXXXXXXXXXXXXXXXXAFYVIKVKCYADWCGRRVNNSVPSQTDNNSEEEF------- 387
                                FYVIKVKCYA WCG R + SVPS   + + EEF       
Sbjct: 61   ISSYFIILVTLFTVIFVVVGFYVIKVKCYATWCGWRFSGSVPSS--DTTTEEFLNENQVD 118

Query: 388  HPVWLISTVGLQQSIINSITVCKYKRNEGLIEGTECSVCLNEFREDDTLRLLPKCSHAFH 567
            HPVWLI+TVGLQ+SIINSITVCKYK+NEGL+EGTECSVCLNEF+E++TLRLLPKC+HAFH
Sbjct: 119  HPVWLIATVGLQESIINSITVCKYKKNEGLVEGTECSVCLNEFQEEETLRLLPKCNHAFH 178

Query: 568  IACIDTWLRSHTNCPLCRAGIXXXXXXXXXXXXXTHEADVSNLGSLEQQDANLGRNQDTL 747
            + CIDTWLRSHTNCPLCRAGI                A VSN    EQ++ANLGRNQDTL
Sbjct: 179  VPCIDTWLRSHTNCPLCRAGIVSNSVNSEA------PAPVSN---SEQENANLGRNQDTL 229

Query: 748  LENEGGLRLTNINNMVGVNNGELENRAGTGESSEAEALVEFSTDESNSKERVLNDPIQNX 927
            L+N              +N G L +    GESSEA        DESNSK+RV ND  QN 
Sbjct: 230  LDNS------------RINEGGLSSNMVAGESSEA-------IDESNSKDRV-NDETQNN 269

Query: 928  XXXXXXXXXXXXXXXXXXETELDNV---------------NLLKQD-GGD--YSKACKTK 1053
                              E E   V               NL KQD  GD  YSK CKT 
Sbjct: 270  GVLMNIEIQTEMGSVSTTECESHRVVDDHKHDDDTMLHTDNLGKQDQDGDYYYSKTCKTV 329

Query: 1054 RRSSIEECLHISPVIMKRSF-SWNGRIVSTRGYMNLNSTL 1170
            RRSSIEECLH+SPV MKRSF S NGR +++RGYM+LNS L
Sbjct: 330  RRSSIEECLHLSPVSMKRSFSSCNGRTLTSRGYMSLNSKL 369


>ref|XP_003518241.1| PREDICTED: RING-H2 finger protein ATL54-like [Glycine max]
          Length = 381

 Score =  342 bits (876), Expect = 2e-91
 Identities = 210/399 (52%), Positives = 237/399 (59%), Gaps = 31/399 (7%)
 Frame = +1

Query: 67   MARIHRKLFPAETTT--NQTLNCYGFCDPPCPSNCYTNPDYYFFSXXXXXXQHS---NHX 231
            MA  HRKLFP ETTT  NQT +CYGFCDP CP NCY NPDY FFS       HS   NH 
Sbjct: 1    MASKHRKLFPDETTTTTNQTQDCYGFCDPACPYNCYNNPDY-FFSPPPPSISHSSQVNHI 59

Query: 232  XXXXXXXXXXXXXXXXXXAFYVIKVKCYADWCGRRVNN-SVPSQTDN-----NSEEEFHP 393
                               FYVIKVKCYA WCG R NN SVPSQ+D      N  +  HP
Sbjct: 60   SSYLIILVTLFTVIFVVVGFYVIKVKCYAAWCGWRFNNGSVPSQSDTAEEFLNENQVDHP 119

Query: 394  VWLISTVGLQQSIINSITVCKYKRNEGLIEGTECSVCLNEFREDDTLRLLPKCSHAFHIA 573
            VWLI+TVGLQQSIINSITVCKYK+NE L+EGTECSVCLNEF+E++TLRLLPKC+HAFH+ 
Sbjct: 120  VWLIATVGLQQSIINSITVCKYKKNERLVEGTECSVCLNEFQEEETLRLLPKCNHAFHVP 179

Query: 574  CIDTWLRSHTNCPLCRAGIXXXXXXXXXXXXXTHEADVSNLGSLEQQDANLGRNQDTLLE 753
            CIDTWLRSHTNCPLCRAGI               +A VSN    EQ++ANL RNQDTLLE
Sbjct: 180  CIDTWLRSHTNCPLCRAGIVSSSVNSEA------QAPVSNS---EQENANLERNQDTLLE 230

Query: 754  NEGGLRLTNINNMVGVNNGELENRAGTGESSEAEALVEFSTDESNSKERVLNDPIQNXXX 933
            N         +NMV             GESSEA        DESNSK+RV ND  QN   
Sbjct: 231  NSRNNECDLSSNMVA------------GESSEA-------LDESNSKDRV-NDQTQNDVV 270

Query: 934  XXXXXXXXXXXXXXXX----------------ETELDNVNLLKQD-GGDY--SKACKTKR 1056
                                            +T L+ V+  KQ+  G+Y  SK CK  R
Sbjct: 271  LNIEILTETGSVSTTESESESHRVVDDHKQHDDTMLNTVDQRKQEQDGEYYCSKTCKAMR 330

Query: 1057 RSSIEECLHISPVIMKRSF-SWNGRIVSTRGYMNLNSTL 1170
            RSSIEECLH++PV MKRSF S N RI+++R YM+LNS L
Sbjct: 331  RSSIEECLHLNPVSMKRSFSSCNRRILTSRVYMSLNSKL 369


>ref|XP_003615188.1| RING-H2 finger protein ATL1O [Medicago truncatula]
            gi|355516523|gb|AES98146.1| RING-H2 finger protein ATL1O
            [Medicago truncatula]
          Length = 352

 Score =  313 bits (802), Expect = 8e-83
 Identities = 180/375 (48%), Positives = 215/375 (57%), Gaps = 21/375 (5%)
 Frame = +1

Query: 67   MARIHRKLFPAETTTNQTLNCYGFCDPPCPSNCYTNPDYYFFSXXXXXXQHSNHXXXXXX 246
            MARI RKLFP E TTNQTL+CYGFCDP CPSNCYTN +YYF           NH      
Sbjct: 1    MARIQRKLFPTEPTTNQTLDCYGFCDPSCPSNCYTNTNYYFSPPPLEHTTQVNHVSSYFI 60

Query: 247  XXXXXXXXXXXXXAFYVIKVKCYADWCGRRVNNSVPSQTDNNSE-----------EEFHP 393
                          FYVIKVKCY + CG R+NNSV SQT+N+ E              HP
Sbjct: 61   ILISLFSLIFIIIGFYVIKVKCYNEMCGWRINNSVRSQTENSEEFLNENQVDRDHNRDHP 120

Query: 394  VWLISTVGLQQSIINSITVCKYKRNEGLIEGTECSVCLNEFREDDTLRLLPKCSHAFHIA 573
            VWLI+TVGLQQSIINSITVCKY++NEGLIEGTECSVCLNEF ED+TLRLLPKCSHAFHI+
Sbjct: 121  VWLIATVGLQQSIINSITVCKYRKNEGLIEGTECSVCLNEFHEDETLRLLPKCSHAFHIS 180

Query: 574  CIDTWLRSHTNCPLCRAGIXXXXXXXXXXXXXTHEADVSNLGSLEQQDANLGRNQDTLLE 753
            CIDTWLRSHTNCPLCRAGI             T E  + N    EQ++  LGRNQ+T LE
Sbjct: 181  CIDTWLRSHTNCPLCRAGI--------VSNNVTPEVTIPN---SEQENNILGRNQETHLE 229

Query: 754  NEGGLRLTNINNMVGVNNGELENRAGTGESSEAEALVEFSTDESNSKERVLNDPIQNXXX 933
            N    +   ++N + +N         TGESS          DESN KE++++DP      
Sbjct: 230  NPRNDQEDVLSNNIVINVTFETRVETTGESS----------DESNYKEQIIDDP------ 273

Query: 934  XXXXXXXXXXXXXXXXETELDNVNLLKQDGGDY----------SKACKTKRRSSIEECLH 1083
                            E +++ + L+  + G Y           K  K+ RRS IEE LH
Sbjct: 274  -----------TVTNDEIQIE-MGLVSTEPGSYHQISPWKLITEKNSKSTRRSPIEERLH 321

Query: 1084 ISPVIMKRSFSWNGR 1128
            + P+ MK+ F  + R
Sbjct: 322  VKPIAMKKFFPLHQR 336


>gb|ACU20486.1| unknown [Glycine max]
          Length = 233

 Score =  279 bits (714), Expect = 1e-72
 Identities = 149/240 (62%), Positives = 163/240 (67%), Gaps = 11/240 (4%)
 Frame = +1

Query: 67  MARIHRKLFPAETTT--NQTLNCYGFCDPPCPSNCYTNPDYYFFSXXXXXXQHS---NHX 231
           MA  HRKLFP ETTT  NQT +CYGFCDP CP NCY NPDY FFS       HS   NH 
Sbjct: 1   MASKHRKLFPDETTTTTNQTQDCYGFCDPACPYNCYNNPDY-FFSPPPPSISHSSQVNHI 59

Query: 232 XXXXXXXXXXXXXXXXXXAFYVIKVKCYADWCGRRVNN-SVPSQTDN-----NSEEEFHP 393
                              FYVIKVKCYA WCG R NN SVPSQ+D      N  +  HP
Sbjct: 60  SPYLIILVTLFTVIFVVVGFYVIKVKCYAAWCGWRFNNGSVPSQSDTAEEFLNENQVDHP 119

Query: 394 VWLISTVGLQQSIINSITVCKYKRNEGLIEGTECSVCLNEFREDDTLRLLPKCSHAFHIA 573
           VWLI+TVGLQQSIINSITVCKYK+NE L+EGTECSVCLNEF+E++TLRLLPKC+HAFH+ 
Sbjct: 120 VWLIATVGLQQSIINSITVCKYKKNERLVEGTECSVCLNEFQEEETLRLLPKCNHAFHVP 179

Query: 574 CIDTWLRSHTNCPLCRAGIXXXXXXXXXXXXXTHEADVSNLGSLEQQDANLGRNQDTLLE 753
           CIDTWLRSHTNCPLCRAGI               +A VSN    EQ++ANL RNQDTLLE
Sbjct: 180 CIDTWLRSHTNCPLCRAGIVSSSVNSEA------QAPVSN---SEQENANLERNQDTLLE 230


>ref|XP_002301077.1| predicted protein [Populus trichocarpa] gi|222842803|gb|EEE80350.1|
            predicted protein [Populus trichocarpa]
          Length = 389

 Score =  252 bits (644), Expect = 2e-64
 Identities = 163/409 (39%), Positives = 206/409 (50%), Gaps = 40/409 (9%)
 Frame = +1

Query: 67   MARIHRKLFPAETTTNQTLNCYGFCDPPCPSNCYTNPDYYFFSXXXXXX--QHSNHXXXX 240
            MA  HRKLFP  T TNQT++C  FCDP CP NCY   DYY              +H    
Sbjct: 1    MAMKHRKLFPIGTETNQTIDCPDFCDPACPYNCYPYSDYYLLPPPPPPPFLPQEHHLSPY 60

Query: 241  XXXXXXXXXXXXXXXAFYVIKVKCYADWCGRRVNNSVPSQTDNNSEEEF-------HPVW 399
                           ++YVI  K  + WCG R NN+ P   +++++EEF       HP+W
Sbjct: 61   VIIIVALLASFFLIVSYYVIVAKSCSGWCGSR-NNTEPQAQEDDTDEEFLDENRVDHPIW 119

Query: 400  LISTVGLQQSIINSITVCKYKRNEGLIEGTECSVCLNEFREDDTLRLLPKCSHAFHIACI 579
             I+T+GLQQSIINSITVCKYK+ EGLIEGTECSVCL+EF++D+TLRLLPKC+HAFHI+CI
Sbjct: 120  FITTIGLQQSIINSITVCKYKKGEGLIEGTECSVCLSEFQQDETLRLLPKCNHAFHISCI 179

Query: 580  DTWLRSHTNCPLCRAGIXXXXXXXXXXXXXTHEADVSNLGSLEQQDANLGRNQDTLLENE 759
            DTWLRSHTNCPLCR  I                   + L S+ Q   NL     T +EN 
Sbjct: 180  DTWLRSHTNCPLCRTHIINGPAS-------------TPLISVGQNHDNLNPTFSTQMEN- 225

Query: 760  GGLRLTNINNMVGVN---NGELENRAGTGESSEAEALVEFST--DESNSKE--------- 897
                 +++++ +G N   N   ENRAGT E  E   + E  T  DE NS +         
Sbjct: 226  -----SDVDSGLGNNQESNEPCENRAGTEEVGEILQVGEERTLKDEVNSNDIGDLQVLCS 280

Query: 898  ------------RVLN-----DPIQNXXXXXXXXXXXXXXXXXXXETELDNVNLLKQDGG 1026
                        ++L      D ++                    + E  +  +LK+DGG
Sbjct: 281  SVDKHQAEDNDIKLLRRSSSMDSLRATTMCIGLNDHKNLVNQIDIDEERKSNMVLKRDGG 340

Query: 1027 DYSKACKTKRRSSIEECLHISPVIMKRSFSWNGRIVSTRGYMNLNSTLP 1173
             YS   K    SS    LH  PV MKRSFS  GR  S+R   +L   LP
Sbjct: 341  -YSSVFKLTGTSSFSLSLHKGPVSMKRSFSCGGRFFSSRQNPSLKPILP 388


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