BLASTX nr result
ID: Glycyrrhiza23_contig00018353
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza23_contig00018353
(1084 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003599420.1| Pentatricopeptide repeat-containing protein ... 528 e-148
ref|XP_003544432.1| PREDICTED: pentatricopeptide repeat-containi... 520 e-145
emb|CBI24939.3| unnamed protein product [Vitis vinifera] 451 e-124
ref|XP_002313317.1| predicted protein [Populus trichocarpa] gi|2... 444 e-122
ref|XP_002273156.2| PREDICTED: pentatricopeptide repeat-containi... 442 e-122
>ref|XP_003599420.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355488468|gb|AES69671.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 511
Score = 528 bits (1361), Expect = e-148
Identities = 254/291 (87%), Positives = 272/291 (93%)
Frame = +1
Query: 1 EDMKSVVDCKPNVYTYSILISCCAKFHRFDLIEQVLAEMSYLGIEYNSVTYNSIIDGYGK 180
EDMKSVVDCKP+VYTYS+LISCCAKF RFDLIE+VLA+MSY GIE NSVTYNSIIDGYGK
Sbjct: 191 EDMKSVVDCKPDVYTYSVLISCCAKFRRFDLIERVLADMSYSGIECNSVTYNSIIDGYGK 250
Query: 181 AGMFEHMENSLTDMIENDNCQPDVFTLNSFIGSYGNGGQIDKMEKWYDEFQLMGIKPDTK 360
AGMFE MENSLTDMIEN+NCQPDVFTLNS IGSYGNGG+IDKMEKWYDEFQLM IKPD K
Sbjct: 251 AGMFEQMENSLTDMIENENCQPDVFTLNSLIGSYGNGGKIDKMEKWYDEFQLMSIKPDIK 310
Query: 361 TFNMMIKSYGKAGMYNKMKTVMDFMERRVFTPTIVTHNTVIEVYGKAGEIEKMDKYFKKM 540
TFNMMIKSYGKAGMY+KMK+VMDFMERR F PTIVT+NTVIEVYGKAGEIEKMDK+FK M
Sbjct: 311 TFNMMIKSYGKAGMYDKMKSVMDFMERRFFAPTIVTYNTVIEVYGKAGEIEKMDKHFKNM 370
Query: 541 KHLGVKPNSVTYCSLVNAYSKAGRIDKVDSILRHVENSDVVLDTPFFNCIISAYGQAGDL 720
KH+G+KPNSVTYCSLVNAYSKAG I K+DSILRHVENSDV+LDTPFFNCIISAYGQ GDL
Sbjct: 371 KHIGMKPNSVTYCSLVNAYSKAGLIRKIDSILRHVENSDVILDTPFFNCIISAYGQVGDL 430
Query: 721 KKMGELFLAMRERKCEPDSITFACMIQAYNTQGMTEAAKNLENMMIAVEDN 873
KKMGELFLAMR RKCEPD TF CMIQAYNTQG+TEAAKNLE MMI+ +D+
Sbjct: 431 KKMGELFLAMRARKCEPDRTTFTCMIQAYNTQGITEAAKNLETMMISAKDS 481
Score = 151 bits (382), Expect = 2e-34
Identities = 77/283 (27%), Positives = 159/283 (56%), Gaps = 1/283 (0%)
Frame = +1
Query: 28 KPNVYTYSILISCCAKFHRFDLIEQVLAEMSYLGIEYNSVTYNSIIDGYGKAGMFEHMEN 207
+P TY+ L+ +K + Q+ M + G++ +++ YG++G+F H +
Sbjct: 129 EPRCQTYTKLLMMLSKCKQPKEASQLYETMLFEGLKPTVDVLTALVSAYGQSGLFRHAFS 188
Query: 208 SLTDMIENDNCQPDVFTLNSFIGSYGNGGQIDKMEKWYDEFQLMGIKPDTKTFNMMIKSY 387
++ DM +C+PDV+T + I + D +E+ + GI+ ++ T+N +I Y
Sbjct: 189 TIEDMKSVVDCKPDVYTYSVLISCCAKFRRFDLIERVLADMSYSGIECNSVTYNSIIDGY 248
Query: 388 GKAGMYNKMK-TVMDFMERRVFTPTIVTHNTVIEVYGKAGEIEKMDKYFKKMKHLGVKPN 564
GKAGM+ +M+ ++ D +E P + T N++I YG G+I+KM+K++ + + + +KP+
Sbjct: 249 GKAGMFEQMENSLTDMIENENCQPDVFTLNSLIGSYGNGGKIDKMEKWYDEFQLMSIKPD 308
Query: 565 SVTYCSLVNAYSKAGRIDKVDSILRHVENSDVVLDTPFFNCIISAYGQAGDLKKMGELFL 744
T+ ++ +Y KAG DK+ S++ +E +N +I YG+AG+++KM + F
Sbjct: 309 IKTFNMMIKSYGKAGMYDKMKSVMDFMERRFFAPTIVTYNTVIEVYGKAGEIEKMDKHFK 368
Query: 745 AMRERKCEPDSITFACMIQAYNTQGMTEAAKNLENMMIAVEDN 873
M+ +P+S+T+ ++ AY+ G+ + +++++ VE++
Sbjct: 369 NMKHIGMKPNSVTYCSLVNAYSKAGL---IRKIDSILRHVENS 408
>ref|XP_003544432.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53170-like
[Glycine max]
Length = 481
Score = 520 bits (1339), Expect = e-145
Identities = 250/299 (83%), Positives = 273/299 (91%)
Frame = +1
Query: 1 EDMKSVVDCKPNVYTYSILISCCAKFHRFDLIEQVLAEMSYLGIEYNSVTYNSIIDGYGK 180
EDMKSVVDC+P+VYTYSILI CCAKF RFDLIE VLAEMSYLGI+ N VTYNSIIDGYGK
Sbjct: 183 EDMKSVVDCEPDVYTYSILIRCCAKFRRFDLIEHVLAEMSYLGIKCNCVTYNSIIDGYGK 242
Query: 181 AGMFEHMENSLTDMIENDNCQPDVFTLNSFIGSYGNGGQIDKMEKWYDEFQLMGIKPDTK 360
A MFE M+++L DMIEN N PDVFTLNSF+G+YGN GQIDKMEKWYDEFQLMGIKPD
Sbjct: 243 ASMFEQMDDALNDMIENGNSHPDVFTLNSFVGAYGNAGQIDKMEKWYDEFQLMGIKPDIT 302
Query: 361 TFNMMIKSYGKAGMYNKMKTVMDFMERRVFTPTIVTHNTVIEVYGKAGEIEKMDKYFKKM 540
TFN MIKSYGKAGMY KMKTVMDFME+R FTPTIVT+NTVIEV+GKAGEIEKMD++F KM
Sbjct: 303 TFNTMIKSYGKAGMYEKMKTVMDFMEKRFFTPTIVTYNTVIEVFGKAGEIEKMDQHFLKM 362
Query: 541 KHLGVKPNSVTYCSLVNAYSKAGRIDKVDSILRHVENSDVVLDTPFFNCIISAYGQAGDL 720
KHLGVKPNS+TYCSLV+AYSK G IDKVDSI+RHVENSDVVLDTPFFNCIISAYGQAG+L
Sbjct: 363 KHLGVKPNSITYCSLVSAYSKVGCIDKVDSIMRHVENSDVVLDTPFFNCIISAYGQAGNL 422
Query: 721 KKMGELFLAMRERKCEPDSITFACMIQAYNTQGMTEAAKNLENMMIAVEDNFDAKLIGC 897
KKMGELFLAMRERKCEPD+ITFACMIQ+YNTQGMTEA +NLENMMI+ + + KLIGC
Sbjct: 423 KKMGELFLAMRERKCEPDNITFACMIQSYNTQGMTEAVQNLENMMISAKSSLGTKLIGC 481
>emb|CBI24939.3| unnamed protein product [Vitis vinifera]
Length = 485
Score = 451 bits (1159), Expect = e-124
Identities = 212/299 (70%), Positives = 256/299 (85%)
Frame = +1
Query: 1 EDMKSVVDCKPNVYTYSILISCCAKFHRFDLIEQVLAEMSYLGIEYNSVTYNSIIDGYGK 180
EDMKSV DCKP+VYTYSILI CC RFDLIE++ EMSYLGIE ++VTYN+IIDGYGK
Sbjct: 187 EDMKSVSDCKPDVYTYSILIKCCTTLGRFDLIERIFTEMSYLGIECSTVTYNTIIDGYGK 246
Query: 181 AGMFEHMENSLTDMIENDNCQPDVFTLNSFIGSYGNGGQIDKMEKWYDEFQLMGIKPDTK 360
A MFE ME+SLT+MIE+ C PD+FTLNSFI +YGN GQI+KMEKWYDEFQLMGI+PD K
Sbjct: 247 ADMFELMESSLTEMIESGTCLPDIFTLNSFIWAYGNSGQIEKMEKWYDEFQLMGIRPDIK 306
Query: 361 TFNMMIKSYGKAGMYNKMKTVMDFMERRVFTPTIVTHNTVIEVYGKAGEIEKMDKYFKKM 540
TFN++I+SYGKA MY KM +VM+FM++R ++PTIVT N VIE++G+ G IEKM+++F KM
Sbjct: 307 TFNILIRSYGKACMYEKMVSVMEFMKKRFYSPTIVTFNIVIEMFGRVGNIEKMEEFFLKM 366
Query: 541 KHLGVKPNSVTYCSLVNAYSKAGRIDKVDSILRHVENSDVVLDTPFFNCIISAYGQAGDL 720
KH GVKPNS+TYCSLV+AYSKAG + KVDSILR +ENSDV LDTPFFNC++SAYGQAGD+
Sbjct: 367 KHQGVKPNSITYCSLVSAYSKAGYLKKVDSILRQIENSDVTLDTPFFNCVLSAYGQAGDV 426
Query: 721 KKMGELFLAMRERKCEPDSITFACMIQAYNTQGMTEAAKNLENMMIAVEDNFDAKLIGC 897
++MGELFL M+ERKC+PD+ITFA MIQAYN QGM EAA+NLE MI ++ +LIGC
Sbjct: 427 ERMGELFLVMKERKCKPDNITFATMIQAYNAQGMIEAAQNLEVNMITTKNKSGTRLIGC 485
Score = 145 bits (366), Expect = 2e-32
Identities = 78/291 (26%), Positives = 150/291 (51%), Gaps = 1/291 (0%)
Frame = +1
Query: 28 KPNVYTYSILISCCAKFHRFDLIEQVLAEMSYLGIEYNSVTYNSIIDGYGKAGMFEHMEN 207
+P TY+ L+ K + + + M G+ Y +++ YG +G +
Sbjct: 125 EPRCQTYTKLLMMLGKCKQPEQASLLFEVMLSEGLRPTLDVYTALVSAYGHSGQLDKAFC 184
Query: 208 SLTDMIENDNCQPDVFTLNSFIGSYGNGGQIDKMEKWYDEFQLMGIKPDTKTFNMMIKSY 387
++ DM +C+PDV+T + I G+ D +E+ + E +GI+ T T+N +I Y
Sbjct: 185 TVEDMKSVSDCKPDVYTYSILIKCCTTLGRFDLIERIFTEMSYLGIECSTVTYNTIIDGY 244
Query: 388 GKAGMYNKMK-TVMDFMERRVFTPTIVTHNTVIEVYGKAGEIEKMDKYFKKMKHLGVKPN 564
GKA M+ M+ ++ + +E P I T N+ I YG +G+IEKM+K++ + + +G++P+
Sbjct: 245 GKADMFELMESSLTEMIESGTCLPDIFTLNSFIWAYGNSGQIEKMEKWYDEFQLMGIRPD 304
Query: 565 SVTYCSLVNAYSKAGRIDKVDSILRHVENSDVVLDTPFFNCIISAYGQAGDLKKMGELFL 744
T+ L+ +Y KA +K+ S++ ++ FN +I +G+ G+++KM E FL
Sbjct: 305 IKTFNILIRSYGKACMYEKMVSVMEFMKKRFYSPTIVTFNIVIEMFGRVGNIEKMEEFFL 364
Query: 745 AMRERKCEPDSITFACMIQAYNTQGMTEAAKNLENMMIAVEDNFDAKLIGC 897
M+ + +P+SIT+ ++ AY+ G + ++ + + D C
Sbjct: 365 KMKHQGVKPNSITYCSLVSAYSKAGYLKKVDSILRQIENSDVTLDTPFFNC 415
>ref|XP_002313317.1| predicted protein [Populus trichocarpa] gi|222849725|gb|EEE87272.1|
predicted protein [Populus trichocarpa]
Length = 474
Score = 444 bits (1142), Expect = e-122
Identities = 207/290 (71%), Positives = 252/290 (86%)
Frame = +1
Query: 4 DMKSVVDCKPNVYTYSILISCCAKFHRFDLIEQVLAEMSYLGIEYNSVTYNSIIDGYGKA 183
+MK++ +CKP+VYTYSILI+CC K HRF+LI +LAEMSYLGIE ++VTYN+IIDGYGKA
Sbjct: 175 EMKAISECKPDVYTYSILINCCIKLHRFELIRGILAEMSYLGIECSTVTYNTIIDGYGKA 234
Query: 184 GMFEHMENSLTDMIENDNCQPDVFTLNSFIGSYGNGGQIDKMEKWYDEFQLMGIKPDTKT 363
MFE MEN+LTDMIE+ + PD+FT NS IG+YG+ G+IDKMEKWY EFQLMG++ D KT
Sbjct: 235 KMFEEMENTLTDMIESGSSVPDLFTFNSIIGAYGSKGRIDKMEKWYTEFQLMGLRQDIKT 294
Query: 364 FNMMIKSYGKAGMYNKMKTVMDFMERRVFTPTIVTHNTVIEVYGKAGEIEKMDKYFKKMK 543
FN++I+SYGKAGMY KM++V++FME+R F+P+IVTHN IE +GKAG+IE M++YF KMK
Sbjct: 295 FNILIRSYGKAGMYGKMRSVLEFMEKRFFSPSIVTHNIFIETFGKAGDIETMEEYFSKMK 354
Query: 544 HLGVKPNSVTYCSLVNAYSKAGRIDKVDSILRHVENSDVVLDTPFFNCIISAYGQAGDLK 723
HLG+KPN+VTYCSLV+AYSKAG I KVDSILR VENSDV+LDTPFFNC+ISAYG+AGD++
Sbjct: 355 HLGIKPNTVTYCSLVSAYSKAGHIMKVDSILRQVENSDVILDTPFFNCVISAYGRAGDIE 414
Query: 724 KMGELFLAMRERKCEPDSITFACMIQAYNTQGMTEAAKNLENMMIAVEDN 873
KM ELFL M RKC+PDSITFA MIQAYN QGM EAA+ +ENMMIA N
Sbjct: 415 KMSELFLGMEGRKCKPDSITFATMIQAYNAQGMIEAAQGMENMMIATRKN 464
Score = 70.9 bits (172), Expect = 5e-10
Identities = 47/174 (27%), Positives = 78/174 (44%), Gaps = 2/174 (1%)
Frame = +1
Query: 304 KMEKWYDEFQLMGIKPDTKTFNMMIKSYGKAGMYNKMKTVMDFMERRVFTPTIVTHNTVI 483
+ + WY+ P TKT+ ++ GK + + + M PTI + ++
Sbjct: 106 RKQHWYE--------PRTKTYTKLLMMLGKCRQPEEGSFLFEVMLSDGLKPTIDVYTALV 157
Query: 484 EVYGKAGEIEKMDKYFKKMKHLG-VKPNSVTYCSLVNAYSKAGRIDKVDSILRHVENSDV 660
YGK+G+++K +MK + KP+ TY L+N K R + + IL + +
Sbjct: 158 SAYGKSGQLDKAFSIVVEMKAISECKPDVYTYSILINCCIKLHRFELIRGILAEMSYLGI 217
Query: 661 VLDTPFFNCIISAYGQAGDLKKMGELFLAMRER-KCEPDSITFACMIQAYNTQG 819
T +N II YG+A ++M M E PD TF +I AY ++G
Sbjct: 218 ECSTVTYNTIIDGYGKAKMFEEMENTLTDMIESGSSVPDLFTFNSIIGAYGSKG 271
>ref|XP_002273156.2| PREDICTED: pentatricopeptide repeat-containing protein At3g53170-like
[Vitis vinifera]
Length = 538
Score = 442 bits (1137), Expect = e-122
Identities = 208/290 (71%), Positives = 251/290 (86%)
Frame = +1
Query: 1 EDMKSVVDCKPNVYTYSILISCCAKFHRFDLIEQVLAEMSYLGIEYNSVTYNSIIDGYGK 180
EDMKSV DCKP+VYTYSILI CC RFDLIE++ EMSYLGIE ++VTYN+IIDGYGK
Sbjct: 187 EDMKSVSDCKPDVYTYSILIKCCTTLGRFDLIERIFTEMSYLGIECSTVTYNTIIDGYGK 246
Query: 181 AGMFEHMENSLTDMIENDNCQPDVFTLNSFIGSYGNGGQIDKMEKWYDEFQLMGIKPDTK 360
A MFE ME+SLT+MIE+ C PD+FTLNSFI +YGN GQI+KMEKWYDEFQLMGI+PD K
Sbjct: 247 ADMFELMESSLTEMIESGTCLPDIFTLNSFIWAYGNSGQIEKMEKWYDEFQLMGIRPDIK 306
Query: 361 TFNMMIKSYGKAGMYNKMKTVMDFMERRVFTPTIVTHNTVIEVYGKAGEIEKMDKYFKKM 540
TFN++I+SYGKA MY KM +VM+FM++R ++PTIVT N VIE++G+ G IEKM+++F KM
Sbjct: 307 TFNILIRSYGKACMYEKMVSVMEFMKKRFYSPTIVTFNIVIEMFGRVGNIEKMEEFFLKM 366
Query: 541 KHLGVKPNSVTYCSLVNAYSKAGRIDKVDSILRHVENSDVVLDTPFFNCIISAYGQAGDL 720
KH GVKPNS+TYCSLV+AYSKAG + KVDSILR +ENSDV LDTPFFNC++SAYGQAGD+
Sbjct: 367 KHQGVKPNSITYCSLVSAYSKAGYLKKVDSILRQIENSDVTLDTPFFNCVLSAYGQAGDV 426
Query: 721 KKMGELFLAMRERKCEPDSITFACMIQAYNTQGMTEAAKNLENMMIAVED 870
++MGELFL M+ERKC+PD+ITFA MIQAYN QGM EAA+NLE MI ++
Sbjct: 427 ERMGELFLVMKERKCKPDNITFATMIQAYNAQGMIEAAQNLEVNMITTKN 476
Score = 145 bits (366), Expect = 2e-32
Identities = 78/291 (26%), Positives = 150/291 (51%), Gaps = 1/291 (0%)
Frame = +1
Query: 28 KPNVYTYSILISCCAKFHRFDLIEQVLAEMSYLGIEYNSVTYNSIIDGYGKAGMFEHMEN 207
+P TY+ L+ K + + + M G+ Y +++ YG +G +
Sbjct: 125 EPRCQTYTKLLMMLGKCKQPEQASLLFEVMLSEGLRPTLDVYTALVSAYGHSGQLDKAFC 184
Query: 208 SLTDMIENDNCQPDVFTLNSFIGSYGNGGQIDKMEKWYDEFQLMGIKPDTKTFNMMIKSY 387
++ DM +C+PDV+T + I G+ D +E+ + E +GI+ T T+N +I Y
Sbjct: 185 TVEDMKSVSDCKPDVYTYSILIKCCTTLGRFDLIERIFTEMSYLGIECSTVTYNTIIDGY 244
Query: 388 GKAGMYNKMK-TVMDFMERRVFTPTIVTHNTVIEVYGKAGEIEKMDKYFKKMKHLGVKPN 564
GKA M+ M+ ++ + +E P I T N+ I YG +G+IEKM+K++ + + +G++P+
Sbjct: 245 GKADMFELMESSLTEMIESGTCLPDIFTLNSFIWAYGNSGQIEKMEKWYDEFQLMGIRPD 304
Query: 565 SVTYCSLVNAYSKAGRIDKVDSILRHVENSDVVLDTPFFNCIISAYGQAGDLKKMGELFL 744
T+ L+ +Y KA +K+ S++ ++ FN +I +G+ G+++KM E FL
Sbjct: 305 IKTFNILIRSYGKACMYEKMVSVMEFMKKRFYSPTIVTFNIVIEMFGRVGNIEKMEEFFL 364
Query: 745 AMRERKCEPDSITFACMIQAYNTQGMTEAAKNLENMMIAVEDNFDAKLIGC 897
M+ + +P+SIT+ ++ AY+ G + ++ + + D C
Sbjct: 365 KMKHQGVKPNSITYCSLVSAYSKAGYLKKVDSILRQIENSDVTLDTPFFNC 415