BLASTX nr result

ID: Glycyrrhiza23_contig00018337 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00018337
         (413 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003545390.1| PREDICTED: chromodomain-helicase-DNA-binding...   267   8e-70
ref|XP_003600162.1| DNA-directed RNA polymerase [Medicago trunca...   267   8e-70
ref|XP_003617298.1| Chromodomain-helicase-DNA-binding protein [M...   263   1e-68
ref|XP_003519517.1| PREDICTED: chromodomain-helicase-DNA-binding...   262   2e-68
ref|XP_004156041.1| PREDICTED: LOW QUALITY PROTEIN: chromodomain...   256   1e-66

>ref|XP_003545390.1| PREDICTED: chromodomain-helicase-DNA-binding protein 2-like
           [Glycine max]
          Length = 1764

 Score =  267 bits (682), Expect = 8e-70
 Identities = 130/137 (94%), Positives = 134/137 (97%)
 Frame = -1

Query: 413 QGLSYAEVTWEKDINITFAQHTIDEYKAREAAMSVQGKMVDLQRRKSKASLRKLDEQPEW 234
           QGLSYAE TWEKDI+I FAQHTIDEYKAREAAM+VQGKMVD QR+KSKASLRKL+EQPEW
Sbjct: 567 QGLSYAEATWEKDIDIAFAQHTIDEYKAREAAMAVQGKMVDSQRKKSKASLRKLEEQPEW 626

Query: 233 LKGGKLRDYQLEGLNFLVNSWRNDTNVILADEMGLGKTVQSVSMLGFLQNAQQIHGPFLV 54
           LKGGKLRDYQLEGLNFLVNSWRNDTNVILADEMGLGKTVQSVSMLGFLQNAQQIHGPFLV
Sbjct: 627 LKGGKLRDYQLEGLNFLVNSWRNDTNVILADEMGLGKTVQSVSMLGFLQNAQQIHGPFLV 686

Query: 53  VVPLSTLSNWAKEFRKW 3
           VVPLSTLSNWAKEFRKW
Sbjct: 687 VVPLSTLSNWAKEFRKW 703


>ref|XP_003600162.1| DNA-directed RNA polymerase [Medicago truncatula]
           gi|355489210|gb|AES70413.1| DNA-directed RNA polymerase
           [Medicago truncatula]
          Length = 2083

 Score =  267 bits (682), Expect = 8e-70
 Identities = 129/137 (94%), Positives = 133/137 (97%)
 Frame = -1

Query: 413 QGLSYAEVTWEKDINITFAQHTIDEYKAREAAMSVQGKMVDLQRRKSKASLRKLDEQPEW 234
           QGLSYAEVTWEKDI+I FAQHTIDEYK REAAMSVQGKMVD QRR+SK SLRKLDEQPEW
Sbjct: 535 QGLSYAEVTWEKDIDIAFAQHTIDEYKTREAAMSVQGKMVDFQRRQSKGSLRKLDEQPEW 594

Query: 233 LKGGKLRDYQLEGLNFLVNSWRNDTNVILADEMGLGKTVQSVSMLGFLQNAQQIHGPFLV 54
           LKGGKLRDYQLEGLNFLVNSW+NDTNV+LADEMGLGKTVQSVSMLGFLQNAQQIHGPFLV
Sbjct: 595 LKGGKLRDYQLEGLNFLVNSWKNDTNVVLADEMGLGKTVQSVSMLGFLQNAQQIHGPFLV 654

Query: 53  VVPLSTLSNWAKEFRKW 3
           VVPLSTLSNWAKEFRKW
Sbjct: 655 VVPLSTLSNWAKEFRKW 671


>ref|XP_003617298.1| Chromodomain-helicase-DNA-binding protein [Medicago truncatula]
           gi|355518633|gb|AET00257.1|
           Chromodomain-helicase-DNA-binding protein [Medicago
           truncatula]
          Length = 1739

 Score =  263 bits (671), Expect = 1e-68
 Identities = 128/137 (93%), Positives = 133/137 (97%)
 Frame = -1

Query: 413 QGLSYAEVTWEKDINITFAQHTIDEYKAREAAMSVQGKMVDLQRRKSKASLRKLDEQPEW 234
           QGLSYAEVTWEKDI+I FAQH+IDEYKARE AMSVQGK+VD QR+KSKASLRKL+EQPEW
Sbjct: 552 QGLSYAEVTWEKDIDIAFAQHSIDEYKAREVAMSVQGKVVDSQRKKSKASLRKLEEQPEW 611

Query: 233 LKGGKLRDYQLEGLNFLVNSWRNDTNVILADEMGLGKTVQSVSMLGFLQNAQQIHGPFLV 54
           L GGKLRDYQLEGLNFLVNSWRNDTNVILADEMGLGKTVQSVSMLGFLQNAQQIHGPFLV
Sbjct: 612 LMGGKLRDYQLEGLNFLVNSWRNDTNVILADEMGLGKTVQSVSMLGFLQNAQQIHGPFLV 671

Query: 53  VVPLSTLSNWAKEFRKW 3
           VVPLSTLSNWAKEFRKW
Sbjct: 672 VVPLSTLSNWAKEFRKW 688


>ref|XP_003519517.1| PREDICTED: chromodomain-helicase-DNA-binding protein 2-like
           [Glycine max]
          Length = 1767

 Score =  262 bits (669), Expect = 2e-68
 Identities = 127/137 (92%), Positives = 133/137 (97%)
 Frame = -1

Query: 413 QGLSYAEVTWEKDINITFAQHTIDEYKAREAAMSVQGKMVDLQRRKSKASLRKLDEQPEW 234
           QGLSYAE TWEKDI+I FAQH IDEYKAREAAM+VQGKMVD QR+KSKASLRKL++QPEW
Sbjct: 570 QGLSYAEATWEKDIDIAFAQHAIDEYKAREAAMAVQGKMVDSQRKKSKASLRKLEKQPEW 629

Query: 233 LKGGKLRDYQLEGLNFLVNSWRNDTNVILADEMGLGKTVQSVSMLGFLQNAQQIHGPFLV 54
           LKGG+LRDYQLEGLNFLVNSWRNDTNVILADEMGLGKTVQSVSMLGFLQNAQQIHGPFLV
Sbjct: 630 LKGGELRDYQLEGLNFLVNSWRNDTNVILADEMGLGKTVQSVSMLGFLQNAQQIHGPFLV 689

Query: 53  VVPLSTLSNWAKEFRKW 3
           VVPLSTLSNWAKEFRKW
Sbjct: 690 VVPLSTLSNWAKEFRKW 706


>ref|XP_004156041.1| PREDICTED: LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding
           protein 2-like [Cucumis sativus]
          Length = 1761

 Score =  256 bits (655), Expect = 1e-66
 Identities = 125/137 (91%), Positives = 131/137 (95%)
 Frame = -1

Query: 413 QGLSYAEVTWEKDINITFAQHTIDEYKAREAAMSVQGKMVDLQRRKSKASLRKLDEQPEW 234
           QGLSYAE TWEKD++I+FAQ  IDEYKAREAA+SVQGK VDLQR+KSK SLRKLDEQPEW
Sbjct: 564 QGLSYAEATWEKDVDISFAQDAIDEYKAREAAISVQGKSVDLQRKKSKVSLRKLDEQPEW 623

Query: 233 LKGGKLRDYQLEGLNFLVNSWRNDTNVILADEMGLGKTVQSVSMLGFLQNAQQIHGPFLV 54
           L GGKLRDYQLEGLNFLVNSWRNDTNVILADEMGLGKTVQSVSMLGFLQNAQQI+GPFLV
Sbjct: 624 LMGGKLRDYQLEGLNFLVNSWRNDTNVILADEMGLGKTVQSVSMLGFLQNAQQIYGPFLV 683

Query: 53  VVPLSTLSNWAKEFRKW 3
           VVPLSTLSNWAKEFRKW
Sbjct: 684 VVPLSTLSNWAKEFRKW 700


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