BLASTX nr result
ID: Glycyrrhiza23_contig00018336
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza23_contig00018336
(1313 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003518456.1| PREDICTED: pentatricopeptide repeat-containi... 644 0.0
ref|XP_003598203.1| Pentatricopeptide repeat-containing protein ... 633 e-179
ref|XP_002264696.1| PREDICTED: pentatricopeptide repeat-containi... 561 e-157
emb|CAN60200.1| hypothetical protein VITISV_039678 [Vitis vinifera] 557 e-156
ref|XP_002306265.1| predicted protein [Populus trichocarpa] gi|2... 548 e-153
>ref|XP_003518456.1| PREDICTED: pentatricopeptide repeat-containing protein At2g13420,
mitochondrial-like [Glycine max]
Length = 510
Score = 644 bits (1662), Expect = 0.0
Identities = 318/428 (74%), Positives = 352/428 (82%), Gaps = 1/428 (0%)
Frame = +3
Query: 33 DEYDAELVSKLLLQQHNPFHATESCLQLHGITLTPNXXXXXXXXXXXXSKIALSLFXXXX 212
DE DAEL+SKLLLQ HNPFHATES LQLHGITLTP SKIALSLF
Sbjct: 33 DESDAELISKLLLQHHNPFHATESPLQLHGITLTPTLLFHTLLRLKNHSKIALSLFHYAK 92
Query: 213 XXXXXXXXXXXXXXXVDIMASVHQFDVAWQLIIEMDQRK-LTPTHSTFLTLIRRLVSAGL 389
+D MA V QFDVAWQLI+EMDQR LTPT STFLTLIRRL+ AGL
Sbjct: 93 TLPNPPLSHSSFTLLIDTMAKVRQFDVAWQLIVEMDQRHHLTPTPSTFLTLIRRLICAGL 152
Query: 390 TRQAVRAFDDIDAFTDAETTPEHFTVLLDTLCKYGHARLASQLFNTNGSRFTPDAKMYTV 569
TRQAVRAF DIDAF++ +TTP+ F VLLDTLCKYGH RLA ++FN N F P KMYTV
Sbjct: 153 TRQAVRAFHDIDAFSETKTTPQDFCVLLDTLCKYGHVRLAVEVFNKNKHTFPPTVKMYTV 212
Query: 570 LIYGWCKLGRIETARSFLKEMKEKGIEPNVVTYNVLLNGICRKASLHPEERFERTIRNAE 749
LIYGWCK+GRI+TA+SFL EM +KGIEPNVVTYNVLLNG+CRK SLHPEERFERTIRNAE
Sbjct: 213 LIYGWCKIGRIKTAQSFLNEMIDKGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRNAE 272
Query: 750 KVFDEMHESGIEPDVTSFSIVLHVYSRAHKPQLSLDKLRVMREKGICPNVVTYTSVIKCL 929
+VFD+M ESGIEPDVTSFSI+LHVYSRAHKPQL LDKL +M+EKGICPNVV YTSVIKCL
Sbjct: 273 EVFDQMRESGIEPDVTSFSILLHVYSRAHKPQLVLDKLSLMKEKGICPNVVMYTSVIKCL 332
Query: 930 CSCGRLEDAEVLLDEMVRNGVSPCAATYNCFFKEYRGRGDSKSALRLFKKMKEDGMCLPT 1109
SCG LEDAE LL EMVR+GVSPCAATYNCFFKE+RGR D +SALR+FK+MKEDG+C+P+
Sbjct: 333 ASCGWLEDAERLLGEMVRDGVSPCAATYNCFFKEFRGRKDGESALRMFKRMKEDGLCMPS 392
Query: 1110 THTYGVLIAMFLRADMVGVVKEIWNDMKESGVGPDLDSYTVLIHGLCRREKWREACHYFV 1289
+HTY +LI MFLR DM+ VVKEIW DMKE+G GPDLD YTVLIHGLC R++WREACHYFV
Sbjct: 393 SHTYVILIRMFLRLDMIKVVKEIWQDMKETGAGPDLDLYTVLIHGLCERQRWREACHYFV 452
Query: 1290 EMIENGFL 1313
EMIENGFL
Sbjct: 453 EMIENGFL 460
>ref|XP_003598203.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355487251|gb|AES68454.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 503
Score = 633 bits (1632), Expect = e-179
Identities = 309/424 (72%), Positives = 348/424 (82%)
Frame = +3
Query: 42 DAELVSKLLLQQHNPFHATESCLQLHGITLTPNXXXXXXXXXXXXSKIALSLFXXXXXXX 221
DAEL+SK+LL HNP+H TES LQL+GITLTP SKIALSL
Sbjct: 30 DAELISKILLTHHNPYHFTESSLQLNGITLTPILLTQTLTLLKHHSKIALSLHNFSKSLP 89
Query: 222 XXXXXXXXXXXXVDIMASVHQFDVAWQLIIEMDQRKLTPTHSTFLTLIRRLVSAGLTRQA 401
+DI++ VHQFD+A QLI+EMDQ L PT +TF LI+RL+SA LTRQA
Sbjct: 90 NPPLSLQSYNLLIDIVSKVHQFDLASQLIVEMDQINLPPTPTTFFILIKRLISANLTRQA 149
Query: 402 VRAFDDIDAFTDAETTPEHFTVLLDTLCKYGHARLASQLFNTNGSRFTPDAKMYTVLIYG 581
VRAF++I+++TD + T +HFT LLDTLCKYG+ + A +LFN N +RF D KMYTVLIYG
Sbjct: 150 VRAFNEIESYTDTKLTSDHFTYLLDTLCKYGYVKHACELFNRNSNRFVADVKMYTVLIYG 209
Query: 582 WCKLGRIETARSFLKEMKEKGIEPNVVTYNVLLNGICRKASLHPEERFERTIRNAEKVFD 761
WCK+GR +TA SFL EMK KG+EPNVVTYNV+LNGICRKASLHPEERFERTIR+AEKVFD
Sbjct: 210 WCKIGRFKTALSFLNEMKVKGVEPNVVTYNVILNGICRKASLHPEERFERTIRDAEKVFD 269
Query: 762 EMHESGIEPDVTSFSIVLHVYSRAHKPQLSLDKLRVMREKGICPNVVTYTSVIKCLCSCG 941
EM ESGIEPDVTSFSIVLHVYSRAHKPQL LDKL +M+EKGICPNVVTYTSVIKCLCSCG
Sbjct: 270 EMRESGIEPDVTSFSIVLHVYSRAHKPQLVLDKLGLMKEKGICPNVVTYTSVIKCLCSCG 329
Query: 942 RLEDAEVLLDEMVRNGVSPCAATYNCFFKEYRGRGDSKSALRLFKKMKEDGMCLPTTHTY 1121
R+E+AE L+DEMVRNGVSPCAATYNCFFKEYRGR D+ AL+ FKKMKEDG+C PTTHTY
Sbjct: 330 RIEEAEDLIDEMVRNGVSPCAATYNCFFKEYRGRKDADKALKFFKKMKEDGLCEPTTHTY 389
Query: 1122 GVLIAMFLRADMVGVVKEIWNDMKESGVGPDLDSYTVLIHGLCRREKWREACHYFVEMIE 1301
GVLIAMFL+ADM+GVVKEIWNDM ESGVGPDLDSYTVLIHGLC +KWREAC YFVEMIE
Sbjct: 390 GVLIAMFLKADMIGVVKEIWNDMMESGVGPDLDSYTVLIHGLCESKKWREACQYFVEMIE 449
Query: 1302 NGFL 1313
GFL
Sbjct: 450 KGFL 453
>ref|XP_002264696.1| PREDICTED: pentatricopeptide repeat-containing protein At2g13420,
mitochondrial [Vitis vinifera]
gi|296088528|emb|CBI37519.3| unnamed protein product
[Vitis vinifera]
Length = 525
Score = 561 bits (1447), Expect = e-157
Identities = 269/425 (63%), Positives = 327/425 (76%)
Frame = +3
Query: 39 YDAELVSKLLLQQHNPFHATESCLQLHGITLTPNXXXXXXXXXXXXSKIALSLFXXXXXX 218
YDA+L+SK+LLQ HNPFHA ES LQL+GI L+ + SKIALS F
Sbjct: 51 YDADLISKILLQHHNPFHAMESSLQLNGIALSTHLVHQTLLRLRNVSKIALSFFLWAKDQ 110
Query: 219 XXXXXXXXXXXXXVDIMASVHQFDVAWQLIIEMDQRKLTPTHSTFLTLIRRLVSAGLTRQ 398
+DI+A V QFDVAWQ IIEMDQ L PT +TF LIRR VSAGLTRQ
Sbjct: 111 AHHSHDVVSYNLIIDILAKVRQFDVAWQFIIEMDQNSLEPTSTTFRILIRRSVSAGLTRQ 170
Query: 399 AVRAFDDIDAFTDAETTPEHFTVLLDTLCKYGHARLASQLFNTNGSRFTPDAKMYTVLIY 578
AVRAFDD+ F + + + F LLDTL KYG+ +LASQ+FN +F +AKMYT+LIY
Sbjct: 171 AVRAFDDMSCFVEKDADSDDFCYLLDTLSKYGYVKLASQIFNQRKFKFEANAKMYTILIY 230
Query: 579 GWCKLGRIETARSFLKEMKEKGIEPNVVTYNVLLNGICRKASLHPEERFERTIRNAEKVF 758
GWCK+ R+ A L EM E+GIE NVVTYNVLLNGICR+ASLHP++RFERTIR+AEKV
Sbjct: 231 GWCKINRVSIAERLLGEMVERGIEANVVTYNVLLNGICRRASLHPDDRFERTIRDAEKVL 290
Query: 759 DEMHESGIEPDVTSFSIVLHVYSRAHKPQLSLDKLRVMREKGICPNVVTYTSVIKCLCSC 938
DEM + GIEPDVTS+SIV+HVYSRAHKP+L+LDKLR+M++KGI P V TYTSV+KCLCSC
Sbjct: 291 DEMRQKGIEPDVTSYSIVIHVYSRAHKPELTLDKLRMMKDKGIWPTVATYTSVVKCLCSC 350
Query: 939 GRLEDAEVLLDEMVRNGVSPCAATYNCFFKEYRGRGDSKSALRLFKKMKEDGMCLPTTHT 1118
GRLEDAE L+ +MV++GVSP AATYNCFFKEYRGR DS +ALRL++KMKE+ CLP HT
Sbjct: 351 GRLEDAEELVSDMVKDGVSPSAATYNCFFKEYRGRKDSDNALRLYRKMKEEYSCLPDMHT 410
Query: 1119 YGVLIAMFLRADMVGVVKEIWNDMKESGVGPDLDSYTVLIHGLCRREKWREACHYFVEMI 1298
Y +L+ MF++ + + +V+EIW+DMK SG GPDLDSYT+LIHGLC ++KW+EACH+FVEMI
Sbjct: 411 YNILVGMFVKLNRMEIVQEIWDDMKTSGAGPDLDSYTLLIHGLCEKQKWKEACHFFVEMI 470
Query: 1299 ENGFL 1313
E G+L
Sbjct: 471 EKGYL 475
Score = 65.1 bits (157), Expect = 4e-08
Identities = 43/185 (23%), Positives = 87/185 (47%), Gaps = 1/185 (0%)
Frame = +3
Query: 546 PDAKMYTVLIYGWCKLGRIETARSFLKEMKEKGIEPNVVTYNVLLNGICRKASLHPEERF 725
P YT ++ C GR+E A + +M + G+ P+ TYN E R
Sbjct: 335 PTVATYTSVVKCLCSCGRLEDAEELVSDMVKDGVSPSAATYNCFFK----------EYRG 384
Query: 726 ERTIRNAEKVFDEMHES-GIEPDVTSFSIVLHVYSRAHKPQLSLDKLRVMREKGICPNVV 902
+ NA +++ +M E PD+ +++I++ ++ + ++ ++ + M+ G P++
Sbjct: 385 RKDSDNALRLYRKMKEEYSCLPDMHTYNILVGMFVKLNRMEIVQEIWDDMKTSGAGPDLD 444
Query: 903 TYTSVIKCLCSCGRLEDAEVLLDEMVRNGVSPCAATYNCFFKEYRGRGDSKSALRLFKKM 1082
+YT +I LC + ++A EM+ G P T+ ++ K+ RL KK+
Sbjct: 445 SYTLLIHGLCEKQKWKEACHFFVEMIEKGYLPQKITFETLYRGLIQSDMLKTWRRLKKKL 504
Query: 1083 KEDGM 1097
+E+ +
Sbjct: 505 EEESI 509
>emb|CAN60200.1| hypothetical protein VITISV_039678 [Vitis vinifera]
Length = 525
Score = 557 bits (1436), Expect = e-156
Identities = 267/425 (62%), Positives = 325/425 (76%)
Frame = +3
Query: 39 YDAELVSKLLLQQHNPFHATESCLQLHGITLTPNXXXXXXXXXXXXSKIALSLFXXXXXX 218
YDA+L+SK+LLQ HNPFHA ES LQL+GI L+ + SKIALS F
Sbjct: 51 YDADLISKILLQHHNPFHAMESSLQLNGIALSTHLVHQTLLRLRNVSKIALSFFLWAKDQ 110
Query: 219 XXXXXXXXXXXXXVDIMASVHQFDVAWQLIIEMDQRKLTPTHSTFLTLIRRLVSAGLTRQ 398
+DI+A V QFDVAWQ IIEMDQ L PT +TF LIRR VSAGLTRQ
Sbjct: 111 AHHSHDVVSYNLIIDILAKVRQFDVAWQFIIEMDQNSLEPTSTTFRILIRRSVSAGLTRQ 170
Query: 399 AVRAFDDIDAFTDAETTPEHFTVLLDTLCKYGHARLASQLFNTNGSRFTPDAKMYTVLIY 578
AVRAFDD+ F + + + F LLDTL KYG+ +LASQ+FN +F +AKMYT+LIY
Sbjct: 171 AVRAFDDMSCFVEKDADSDDFCYLLDTLSKYGYVKLASQIFNQRKFKFEANAKMYTILIY 230
Query: 579 GWCKLGRIETARSFLKEMKEKGIEPNVVTYNVLLNGICRKASLHPEERFERTIRNAEKVF 758
GWCK+ R+ A L EM E+G+ NVVTYNVLLNGICR ASLHP++RFERTIR+AEKV
Sbjct: 231 GWCKINRVSIAERLLGEMVERGJXANVVTYNVLLNGICRXASLHPDDRFERTIRDAEKVL 290
Query: 759 DEMHESGIEPDVTSFSIVLHVYSRAHKPQLSLDKLRVMREKGICPNVVTYTSVIKCLCSC 938
DEM + GIEPDVTS+SIV+HVYSRAHKP+L+LDKLR+M++KGI P V TYTSV+KCLCSC
Sbjct: 291 DEMRQXGIEPDVTSYSIVIHVYSRAHKPELTLDKLRMMKDKGIWPTVATYTSVVKCLCSC 350
Query: 939 GRLEDAEVLLDEMVRNGVSPCAATYNCFFKEYRGRGDSKSALRLFKKMKEDGMCLPTTHT 1118
GRLEDAE L+ +MV++GVSP AATYNCFFKEYRGR DS +ALRL++KMKE+ CLP HT
Sbjct: 351 GRLEDAEELVSDMVKDGVSPSAATYNCFFKEYRGRKDSDNALRLYRKMKEEYSCLPDMHT 410
Query: 1119 YGVLIAMFLRADMVGVVKEIWNDMKESGVGPDLDSYTVLIHGLCRREKWREACHYFVEMI 1298
Y +L+ MF++ + + +V+EIW+DMK SG GPDLDSYT+LIHGLC ++KW+EACH+FVEMI
Sbjct: 411 YNILVGMFVKLNRMEIVQEIWDDMKTSGAGPDLDSYTLLIHGLCEKQKWKEACHFFVEMI 470
Query: 1299 ENGFL 1313
E G+L
Sbjct: 471 EKGYL 475
Score = 65.1 bits (157), Expect = 4e-08
Identities = 43/185 (23%), Positives = 87/185 (47%), Gaps = 1/185 (0%)
Frame = +3
Query: 546 PDAKMYTVLIYGWCKLGRIETARSFLKEMKEKGIEPNVVTYNVLLNGICRKASLHPEERF 725
P YT ++ C GR+E A + +M + G+ P+ TYN E R
Sbjct: 335 PTVATYTSVVKCLCSCGRLEDAEELVSDMVKDGVSPSAATYNCFFK----------EYRG 384
Query: 726 ERTIRNAEKVFDEMHES-GIEPDVTSFSIVLHVYSRAHKPQLSLDKLRVMREKGICPNVV 902
+ NA +++ +M E PD+ +++I++ ++ + ++ ++ + M+ G P++
Sbjct: 385 RKDSDNALRLYRKMKEEYSCLPDMHTYNILVGMFVKLNRMEIVQEIWDDMKTSGAGPDLD 444
Query: 903 TYTSVIKCLCSCGRLEDAEVLLDEMVRNGVSPCAATYNCFFKEYRGRGDSKSALRLFKKM 1082
+YT +I LC + ++A EM+ G P T+ ++ K+ RL KK+
Sbjct: 445 SYTLLIHGLCEKQKWKEACHFFVEMIEKGYLPQKITFETLYRGLIQSDMLKTWRRLKKKL 504
Query: 1083 KEDGM 1097
+E+ +
Sbjct: 505 EEESI 509
>ref|XP_002306265.1| predicted protein [Populus trichocarpa] gi|222855714|gb|EEE93261.1|
predicted protein [Populus trichocarpa]
Length = 548
Score = 548 bits (1412), Expect = e-153
Identities = 270/443 (60%), Positives = 323/443 (72%), Gaps = 19/443 (4%)
Frame = +3
Query: 42 DAELVSKLLLQQHNPFHATESCLQLHGITLTPNXXXXXXXXXXXXSKIALSLFXXXXXXX 221
DA+L+S++LL HNPFHA ES LQL GI+LTP+ SKIALSLF
Sbjct: 56 DADLLSQILLHHHNPFHAMESSLQLPGISLTPSLLHQTLLRLRHNSKIALSLFHHSLSLP 115
Query: 222 XXXXXXXXXXXX-------------------VDIMASVHQFDVAWQLIIEMDQRKLTPTH 344
+DI+A V QFDV WQLI+EMDQR + PT
Sbjct: 116 PTSTDNPPTSTGTSTTSADSSTATTVTYNLMIDILAKVRQFDVCWQLIVEMDQRNVKPTS 175
Query: 345 STFLTLIRRLVSAGLTRQAVRAFDDIDAFTDAETTPEHFTVLLDTLCKYGHARLASQLFN 524
TF LIRRLV+AGLTRQA+RAFDD+++F HF LLDTLCKYG+ ++ ++FN
Sbjct: 176 ETFFVLIRRLVAAGLTRQAIRAFDDMESFVSEPVNETHFCFLLDTLCKYGYVKVGVEIFN 235
Query: 525 TNGSRFTPDAKMYTVLIYGWCKLGRIETARSFLKEMKEKGIEPNVVTYNVLLNGICRKAS 704
RF+P+ KMYTVLIYGWCK+GRI+ A FLKE E+GIE VVTYNVLLNGICR+AS
Sbjct: 236 KRKHRFSPNVKMYTVLIYGWCKIGRIDMAERFLKETGERGIEATVVTYNVLLNGICRRAS 295
Query: 705 LHPEERFERTIRNAEKVFDEMHESGIEPDVTSFSIVLHVYSRAHKPQLSLDKLRVMREKG 884
LHPE RFERTI AE +FDEM E GIEPDVTSFSIVLHVYSRAHKP+L+LDKL++M+EKG
Sbjct: 296 LHPESRFERTITLAENLFDEMRERGIEPDVTSFSIVLHVYSRAHKPELTLDKLKLMKEKG 355
Query: 885 ICPNVVTYTSVIKCLCSCGRLEDAEVLLDEMVRNGVSPCAATYNCFFKEYRGRGDSKSAL 1064
ICP+VVTYTSV+KCLCSCGR+EDAE LL EMVRNGVS A TYNCFFKEY GR D++SAL
Sbjct: 356 ICPSVVTYTSVVKCLCSCGRIEDAEELLGEMVRNGVSRTAVTYNCFFKEYMGRKDAESAL 415
Query: 1065 RLFKKMKEDGMCLPTTHTYGVLIAMFLRADMVGVVKEIWNDMKESGVGPDLDSYTVLIHG 1244
+L+KKM+EDG+ H+Y +L+ MF+ + + +V EIW D+K SG+GPDLDSYT+LIHG
Sbjct: 416 KLYKKMREDGLGSLGLHSYNILLRMFMMLNRLDIVNEIWEDLKSSGLGPDLDSYTMLIHG 475
Query: 1245 LCRREKWREACHYFVEMIENGFL 1313
LC +EKWREAC +FVEMIE G L
Sbjct: 476 LCEKEKWREACKFFVEMIEKGLL 498
Score = 67.4 bits (163), Expect = 8e-09
Identities = 59/256 (23%), Positives = 111/256 (43%), Gaps = 37/256 (14%)
Frame = +3
Query: 441 ETTPEHFTVLLDTLCKYGHAR----------LASQLFNTNGSR-FTPDAKMYTVLIYGWC 587
E T + VLL+ +C+ LA LF+ R PD ++++++ +
Sbjct: 277 EATVVTYNVLLNGICRRASLHPESRFERTITLAENLFDEMRERGIEPDVTSFSIVLHVYS 336
Query: 588 KLGRIETARSFLKEMKEKGIEPNVVTYNVLLNGICRKASLHP-EERFERTIRN------- 743
+ + E LK MKEKGI P+VVTY ++ +C + EE +RN
Sbjct: 337 RAHKPELTLDKLKLMKEKGICPSVVTYTSVVKCLCSCGRIEDAEELLGEMVRNGVSRTAV 396
Query: 744 -----------------AEKVFDEMHESGIEP-DVTSFSIVLHVYSRAHKPQLSLDKLRV 869
A K++ +M E G+ + S++I+L ++ ++ + +
Sbjct: 397 TYNCFFKEYMGRKDAESALKLYKKMREDGLGSLGLHSYNILLRMFMMLNRLDIVNEIWED 456
Query: 870 MREKGICPNVVTYTSVIKCLCSCGRLEDAEVLLDEMVRNGVSPCAATYNCFFKEYRGRGD 1049
++ G+ P++ +YT +I LC + +A EM+ G+ P T+ +K
Sbjct: 457 LKSSGLGPDLDSYTMLIHGLCEKEKWREACKFFVEMIEKGLLPQKVTFETLYKGLIQSDM 516
Query: 1050 SKSALRLFKKMKEDGM 1097
++ RL KK+ E+ +
Sbjct: 517 LRTWRRLKKKLDEESI 532