BLASTX nr result

ID: Glycyrrhiza23_contig00018305 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00018305
         (1141 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK34627.1| unknown [Medicago truncatula]                          333   4e-89
ref|XP_002279095.1| PREDICTED: cleavage and polyadenylation spec...   327   3e-87
emb|CBI27869.3| unnamed protein product [Vitis vinifera]              327   3e-87
ref|NP_001242595.1| uncharacterized protein LOC100791216 [Glycin...   322   1e-85
ref|XP_002514092.1| pre-mRNA cleavage factor im, 25kD subunit, p...   318   1e-84

>gb|AFK34627.1| unknown [Medicago truncatula]
          Length = 205

 Score =  333 bits (855), Expect = 4e-89
 Identities = 165/195 (84%), Positives = 175/195 (89%), Gaps = 1/195 (0%)
 Frame = -1

Query: 865 LEVDIYPLSCYYFGSK-DAIPFKDHSFPDRLQRIKSNYAARGMRTCVEAVLLVELFKHPH 689
           +EV+IYPL+ YYFGSK DAIP KDHS    LQR KSNY ARGMRTCVEAV++VELFKHPH
Sbjct: 15  VEVNIYPLNSYYFGSKEDAIPSKDHS----LQRFKSNYDARGMRTCVEAVMMVELFKHPH 70

Query: 688 LLLLQVKNSIFKLPGGRLRPGESDTDGLKRKLARKLSLDENGDGAEWEVGECLGMWWRPD 509
           LLL Q+KNSIFKLPGGRLRPGESDTDGLKRKLARKLS DEN   AEWEVGECLGMWWRPD
Sbjct: 71  LLLFQIKNSIFKLPGGRLRPGESDTDGLKRKLARKLSADENL--AEWEVGECLGMWWRPD 128

Query: 508 FETLMYPFLPPNVKQPKECTKIFLVRLPASRRFTVPKNLKLLSVPLCQVHENHKTYGTII 329
           FET MYPFLPPNVK PKECTK+FLVRLP SRRFTVPKN+KLLSVPLCQ+ +NHKTYG II
Sbjct: 129 FETSMYPFLPPNVKHPKECTKLFLVRLPESRRFTVPKNMKLLSVPLCQIRDNHKTYGPII 188

Query: 328 SGVPQLLSKFSFNMI 284
           S VPQLLSKFSFNMI
Sbjct: 189 SAVPQLLSKFSFNMI 203


>ref|XP_002279095.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
           5-like [Vitis vinifera]
          Length = 284

 Score =  327 bits (838), Expect = 3e-87
 Identities = 149/194 (76%), Positives = 176/194 (90%)
 Frame = -1

Query: 859 VDIYPLSCYYFGSKDAIPFKDHSFPDRLQRIKSNYAARGMRTCVEAVLLVELFKHPHLLL 680
           +DIYPLSCYYFGSKD +  K+ +  DR+ R+KSNY+  G RTCV AV+LVELFKHPHLLL
Sbjct: 91  LDIYPLSCYYFGSKDPLLLKEETLADRILRMKSNYSRYGSRTCVVAVILVELFKHPHLLL 150

Query: 679 LQVKNSIFKLPGGRLRPGESDTDGLKRKLARKLSLDENGDGAEWEVGECLGMWWRPDFET 500
           LQVKNS FKLPGGRLRPGES+ +GLKRKL+RKLS++E+GDG++WEVGECLGMWWRPDFET
Sbjct: 151 LQVKNSFFKLPGGRLRPGESEINGLKRKLSRKLSVNEDGDGSDWEVGECLGMWWRPDFET 210

Query: 499 LMYPFLPPNVKQPKECTKIFLVRLPASRRFTVPKNLKLLSVPLCQVHENHKTYGTIISGV 320
           L+YP+LPPNVK PKECTK+FLV+LP SR+F VPKNLKLL++PLCQ+HEN KTYG II+GV
Sbjct: 211 LLYPYLPPNVKNPKECTKLFLVKLPPSRKFIVPKNLKLLAIPLCQLHENDKTYGPIIAGV 270

Query: 319 PQLLSKFSFNMIES 278
           PQLLSKFSFN+I+S
Sbjct: 271 PQLLSKFSFNIIDS 284


>emb|CBI27869.3| unnamed protein product [Vitis vinifera]
          Length = 291

 Score =  327 bits (838), Expect = 3e-87
 Identities = 149/194 (76%), Positives = 176/194 (90%)
 Frame = -1

Query: 859 VDIYPLSCYYFGSKDAIPFKDHSFPDRLQRIKSNYAARGMRTCVEAVLLVELFKHPHLLL 680
           +DIYPLSCYYFGSKD +  K+ +  DR+ R+KSNY+  G RTCV AV+LVELFKHPHLLL
Sbjct: 98  LDIYPLSCYYFGSKDPLLLKEETLADRILRMKSNYSRYGSRTCVVAVILVELFKHPHLLL 157

Query: 679 LQVKNSIFKLPGGRLRPGESDTDGLKRKLARKLSLDENGDGAEWEVGECLGMWWRPDFET 500
           LQVKNS FKLPGGRLRPGES+ +GLKRKL+RKLS++E+GDG++WEVGECLGMWWRPDFET
Sbjct: 158 LQVKNSFFKLPGGRLRPGESEINGLKRKLSRKLSVNEDGDGSDWEVGECLGMWWRPDFET 217

Query: 499 LMYPFLPPNVKQPKECTKIFLVRLPASRRFTVPKNLKLLSVPLCQVHENHKTYGTIISGV 320
           L+YP+LPPNVK PKECTK+FLV+LP SR+F VPKNLKLL++PLCQ+HEN KTYG II+GV
Sbjct: 218 LLYPYLPPNVKNPKECTKLFLVKLPPSRKFIVPKNLKLLAIPLCQLHENDKTYGPIIAGV 277

Query: 319 PQLLSKFSFNMIES 278
           PQLLSKFSFN+I+S
Sbjct: 278 PQLLSKFSFNIIDS 291


>ref|NP_001242595.1| uncharacterized protein LOC100791216 [Glycine max]
           gi|255640824|gb|ACU20695.1| unknown [Glycine max]
          Length = 216

 Score =  322 bits (824), Expect = 1e-85
 Identities = 147/181 (81%), Positives = 169/181 (93%)
 Frame = -1

Query: 865 LEVDIYPLSCYYFGSKDAIPFKDHSFPDRLQRIKSNYAARGMRTCVEAVLLVELFKHPHL 686
           LE DIYPLS YYFGSKDA+P KD +  DR+ R+KSNYAA G+RTCVEAVLLVELFKHPHL
Sbjct: 26  LEFDIYPLSSYYFGSKDAVPSKDLTLVDRVLRMKSNYAASGIRTCVEAVLLVELFKHPHL 85

Query: 685 LLLQVKNSIFKLPGGRLRPGESDTDGLKRKLARKLSLDENGDGAEWEVGECLGMWWRPDF 506
           LLLQ++NSI+KLPGGRLRPGESDTDGLKRKLARKLS++E+GDG+EWEVGECLGMWWRPDF
Sbjct: 86  LLLQIRNSIYKLPGGRLRPGESDTDGLKRKLARKLSVNEDGDGSEWEVGECLGMWWRPDF 145

Query: 505 ETLMYPFLPPNVKQPKECTKIFLVRLPASRRFTVPKNLKLLSVPLCQVHENHKTYGTIIS 326
           ETLMYPF+PPNV++PKECTK+FLV+LP SR+  VPKN+++L+VPLCQVHENHKTYG IIS
Sbjct: 146 ETLMYPFIPPNVEKPKECTKVFLVKLPESRKLIVPKNMRVLAVPLCQVHENHKTYGQIIS 205

Query: 325 G 323
           G
Sbjct: 206 G 206


>ref|XP_002514092.1| pre-mRNA cleavage factor im, 25kD subunit, putative [Ricinus
           communis] gi|223546548|gb|EEF48046.1| pre-mRNA cleavage
           factor im, 25kD subunit, putative [Ricinus communis]
          Length = 214

 Score =  318 bits (816), Expect = 1e-84
 Identities = 149/194 (76%), Positives = 171/194 (88%)
 Frame = -1

Query: 859 VDIYPLSCYYFGSKDAIPFKDHSFPDRLQRIKSNYAARGMRTCVEAVLLVELFKHPHLLL 680
           +DIYPLS YYFGSKD +PF+D +  DR+QR+KSNY A G+RTCVEAV+LVELFKHPHLLL
Sbjct: 23  LDIYPLSRYYFGSKDPLPFRDETLVDRVQRMKSNYLAHGLRTCVEAVILVELFKHPHLLL 82

Query: 679 LQVKNSIFKLPGGRLRPGESDTDGLKRKLARKLSLDENGDGAEWEVGECLGMWWRPDFET 500
           LQ+KNSIFKLPGGR+RPGESD  GLKRKL+RKLS   N D  +WEVGECLGMWWRPDFET
Sbjct: 83  LQIKNSIFKLPGGRIRPGESDIGGLKRKLSRKLS--NNQDQTDWEVGECLGMWWRPDFET 140

Query: 499 LMYPFLPPNVKQPKECTKIFLVRLPASRRFTVPKNLKLLSVPLCQVHENHKTYGTIISGV 320
           L+YP+LPPN+K PKECTK+FLVRLP S +F VPKNLKLL+VPL Q+H+NHKTYG IISGV
Sbjct: 141 LLYPYLPPNLKTPKECTKLFLVRLPTSCKFIVPKNLKLLAVPLSQIHDNHKTYGGIISGV 200

Query: 319 PQLLSKFSFNMIES 278
           PQLLSK+SF +I S
Sbjct: 201 PQLLSKYSFRIINS 214


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