BLASTX nr result

ID: Glycyrrhiza23_contig00018303 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00018303
         (917 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003626276.1| DNA polymerase [Medicago truncatula] gi|3555...   473   e-131
ref|XP_003520807.1| PREDICTED: uncharacterized protein LOC100777...   459   e-127
ref|XP_002319017.1| predicted protein [Populus trichocarpa] gi|2...   401   e-109
ref|XP_002512387.1| DNA polymerase zeta catalytic subunit, putat...   389   e-106
emb|CBI36804.3| unnamed protein product [Vitis vinifera]              384   e-104

>ref|XP_003626276.1| DNA polymerase [Medicago truncatula] gi|355501291|gb|AES82494.1| DNA
            polymerase [Medicago truncatula]
          Length = 1037

 Score =  473 bits (1216), Expect = e-131
 Identities = 232/248 (93%), Positives = 236/248 (95%)
 Frame = +3

Query: 3    SGRFSLKDFIFAKEVRLGTYSARISSLPPAAIVATKAMRVDPRAEPRYAERIPYVVIHGE 182
            SGR SLKDFIFAKEVRLGTYSARISSLPPAAIVATKAMRVD RAEPRYAERIPYVVIHGE
Sbjct: 790  SGRVSLKDFIFAKEVRLGTYSARISSLPPAAIVATKAMRVDRRAEPRYAERIPYVVIHGE 849

Query: 183  PGARLADMVVDPLEVLAIDSPFRINDLYYINKQIIPALQRVFGLVGADLNQWFAEMPRPA 362
            PGARL DMVVDPLEVLAIDSPFRINDLYYINKQIIPALQRVFGLVGADLNQWFAEMPRP 
Sbjct: 850  PGARLVDMVVDPLEVLAIDSPFRINDLYYINKQIIPALQRVFGLVGADLNQWFAEMPRPV 909

Query: 363  REASAKHTFAPNFHRTRIDYYYLSKHCVLCGGLVQASARLCNQCSENEVAAATAVISKTS 542
            REAS KH F PNF RTRIDYYYLSKHCVLCGGLVQASARLC+QCSENEVAAATAVI KT+
Sbjct: 910  REASVKHAFTPNFQRTRIDYYYLSKHCVLCGGLVQASARLCSQCSENEVAAATAVIGKTA 969

Query: 543  KLEQEMQHLVAICHHCGGGDRLLESGVKCTSISCLVFYERRKVQKELLAAAHVAAGRGFY 722
            KLEQEMQHLV+IC HCGGGDRLLESGVKCTSISCLVFYERRKVQKELLAA HVAA +GFY
Sbjct: 970  KLEQEMQHLVSICQHCGGGDRLLESGVKCTSISCLVFYERRKVQKELLAATHVAADKGFY 1029

Query: 723  PRCTVEWF 746
            PRCTVEWF
Sbjct: 1030 PRCTVEWF 1037


>ref|XP_003520807.1| PREDICTED: uncharacterized protein LOC100777934 [Glycine max]
          Length = 2793

 Score =  459 bits (1180), Expect = e-127
 Identities = 226/246 (91%), Positives = 231/246 (93%)
 Frame = +3

Query: 3    SGRFSLKDFIFAKEVRLGTYSARISSLPPAAIVATKAMRVDPRAEPRYAERIPYVVIHGE 182
            SGR  LKDFIFAKEVRLGTYSARISSLPPAAIVATKAM VDPRAEPRYAERIPYVVIHGE
Sbjct: 1701 SGRICLKDFIFAKEVRLGTYSARISSLPPAAIVATKAMTVDPRAEPRYAERIPYVVIHGE 1760

Query: 183  PGARLADMVVDPLEVLAIDSPFRINDLYYINKQIIPALQRVFGLVGADLNQWFAEMPRPA 362
            PGARL DMVVDPLEVLAIDSPFRINDLYYINKQIIPALQRVFGLVGADLN WF+EMPRP 
Sbjct: 1761 PGARLVDMVVDPLEVLAIDSPFRINDLYYINKQIIPALQRVFGLVGADLNHWFSEMPRPT 1820

Query: 363  REASAKHTFAPNFHRTRIDYYYLSKHCVLCGGLVQASARLCNQCSENEVAAATAVISKTS 542
            REASAKHT   NFH+TRIDYYYLSKHCVLC  LVQASARLCNQCSENEVAAATAVISKTS
Sbjct: 1821 REASAKHTLTTNFHQTRIDYYYLSKHCVLCDRLVQASARLCNQCSENEVAAATAVISKTS 1880

Query: 543  KLEQEMQHLVAICHHCGGGDRLLESGVKCTSISCLVFYERRKVQKELLAAAHVAAGRGFY 722
            KLEQEMQHLVA+CHHCGGGDRLLE+GVKCTSISCLVFYERRKVQKELLAA HVAA +  Y
Sbjct: 1881 KLEQEMQHLVAVCHHCGGGDRLLENGVKCTSISCLVFYERRKVQKELLAATHVAADKDLY 1940

Query: 723  PRCTVE 740
            PRCTVE
Sbjct: 1941 PRCTVE 1946


>ref|XP_002319017.1| predicted protein [Populus trichocarpa] gi|222857393|gb|EEE94940.1|
            predicted protein [Populus trichocarpa]
          Length = 760

 Score =  401 bits (1031), Expect = e-109
 Identities = 195/250 (78%), Positives = 220/250 (88%), Gaps = 2/250 (0%)
 Frame = +3

Query: 3    SGRFSLKDFIFAKEVRLGTYSARISS-LPPAAIVATKAMRVDPRAEPRYAERIPYVVIHG 179
            SGR SL+DF+FAKEVRLGTYS R S+ LPPAAIVATKAMR DPRAEP YAER+PYVVIHG
Sbjct: 511  SGRVSLQDFVFAKEVRLGTYSTRASAALPPAAIVATKAMRTDPRAEPCYAERVPYVVIHG 570

Query: 180  EPGARLADMVVDPLEVLAIDSPFRINDLYYINKQIIPALQRVFGLVGADLNQWFAEMPRP 359
            EPGARL DMVVDPL++LAIDSPFR+ND+YYI KQIIPALQRVFGL+GADLNQWF+EMPRP
Sbjct: 571  EPGARLVDMVVDPLDLLAIDSPFRLNDVYYITKQIIPALQRVFGLLGADLNQWFSEMPRP 630

Query: 360  AREASAKH-TFAPNFHRTRIDYYYLSKHCVLCGGLVQASARLCNQCSENEVAAATAVISK 536
            AREA +K  ++APN  RTRIDYYYLSKHCVLCG LVQASA +CN+CS+ E+AAATAVI +
Sbjct: 631  AREALSKRPSYAPNPQRTRIDYYYLSKHCVLCGELVQASAHICNKCSQREIAAATAVIGR 690

Query: 537  TSKLEQEMQHLVAICHHCGGGDRLLESGVKCTSISCLVFYERRKVQKELLAAAHVAAGRG 716
            TSKLE+EMQHL AIC HCGGGD LLESG+KCTS++C VFYERRKVQ+EL   + VA   G
Sbjct: 691  TSKLEKEMQHLAAICRHCGGGDWLLESGIKCTSLACSVFYERRKVQRELQGLSAVAGDVG 750

Query: 717  FYPRCTVEWF 746
             YP+C VEWF
Sbjct: 751  LYPKCMVEWF 760


>ref|XP_002512387.1| DNA polymerase zeta catalytic subunit, putative [Ricinus communis]
            gi|223548348|gb|EEF49839.1| DNA polymerase zeta catalytic
            subunit, putative [Ricinus communis]
          Length = 2066

 Score =  389 bits (998), Expect = e-106
 Identities = 190/245 (77%), Positives = 214/245 (87%), Gaps = 2/245 (0%)
 Frame = +3

Query: 3    SGRFSLKDFIFAKEVRLGTYSARI-SSLPPAAIVATKAMRVDPRAEPRYAERIPYVVIHG 179
            SGR SL+DFIFAKEVRLGTYS R  SSLPPAAI+ATKAM+VDPRAEPRYAER+PYVVIHG
Sbjct: 948  SGRVSLQDFIFAKEVRLGTYSTRAASSLPPAAILATKAMKVDPRAEPRYAERVPYVVIHG 1007

Query: 180  EPGARLADMVVDPLEVLAIDSPFRINDLYYINKQIIPALQRVFGLVGADLNQWFAEMPRP 359
            EPGARL DMVVDPL++LAIDSP+R+ND+YYI+KQIIPALQRVFGL+GADLNQWF EMPRP
Sbjct: 1008 EPGARLVDMVVDPLDLLAIDSPYRLNDIYYISKQIIPALQRVFGLLGADLNQWFLEMPRP 1067

Query: 360  AREASAKH-TFAPNFHRTRIDYYYLSKHCVLCGGLVQASARLCNQCSENEVAAATAVISK 536
             R+  AK  ++  N  RTRIDYYYLSKHCVLC  LV AS RLCN+CS+ E AAATAVI +
Sbjct: 1068 GRDTYAKRPSYGSNPQRTRIDYYYLSKHCVLCDELVNASTRLCNKCSQKETAAATAVIGR 1127

Query: 537  TSKLEQEMQHLVAICHHCGGGDRLLESGVKCTSISCLVFYERRKVQKELLAAAHVAAGRG 716
            TSKLE+EMQHL AIC HCGGGD LLESGVKCTS++C VFYERRKVQKEL   + +AA +G
Sbjct: 1128 TSKLEREMQHLAAICRHCGGGDWLLESGVKCTSLACSVFYERRKVQKELQGLSLIAADKG 1187

Query: 717  FYPRC 731
            FYP+C
Sbjct: 1188 FYPKC 1192


>emb|CBI36804.3| unnamed protein product [Vitis vinifera]
          Length = 1732

 Score =  384 bits (987), Expect = e-104
 Identities = 183/249 (73%), Positives = 214/249 (85%), Gaps = 1/249 (0%)
 Frame = +3

Query: 3    SGRFSLKDFIFAKEVRLGTYSARISSLPPAAIVATKAMRVDPRAEPRYAERIPYVVIHGE 182
            SGR SL+DF+FAKEVRLGTYS+R SSLPPAAIVA KAMR DPRAEP YAER+PYVVIHGE
Sbjct: 1484 SGRVSLQDFVFAKEVRLGTYSSRASSLPPAAIVAIKAMRADPRAEPCYAERVPYVVIHGE 1543

Query: 183  PGARLADMVVDPLEVLAIDSPFRINDLYYINKQIIPALQRVFGLVGADLNQWFAEMPRPA 362
            PGARL D+VVDPL++LAIDSP+R+ND YYINKQIIPALQRVFGLVGADL QWF+EMPRP 
Sbjct: 1544 PGARLVDLVVDPLDLLAIDSPYRLNDQYYINKQIIPALQRVFGLVGADLYQWFSEMPRPV 1603

Query: 363  REASAKH-TFAPNFHRTRIDYYYLSKHCVLCGGLVQASARLCNQCSENEVAAATAVISKT 539
            RE  AKH + APN +RTRID+YYLSKHC+LCG L  ASA +C++CS++  A A AVI +T
Sbjct: 1604 REVYAKHKSHAPNPYRTRIDFYYLSKHCILCGELSPASAHICDKCSKDGTAVAAAVIGRT 1663

Query: 540  SKLEQEMQHLVAICHHCGGGDRLLESGVKCTSISCLVFYERRKVQKELLAAAHVAAGRGF 719
            +KLE+++QHL AIC HCGGGD ++ESGVKCTS++C VFYERRKVQK+L   + VA   GF
Sbjct: 1664 AKLERDIQHLAAICRHCGGGDWIVESGVKCTSLACSVFYERRKVQKDLQGLSSVATEAGF 1723

Query: 720  YPRCTVEWF 746
            YP+C VEWF
Sbjct: 1724 YPKCMVEWF 1732


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