BLASTX nr result

ID: Glycyrrhiza23_contig00018289 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00018289
         (605 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003534431.1| PREDICTED: TATA-binding protein-associated f...   297   1e-78
ref|XP_003534430.1| PREDICTED: TATA-binding protein-associated f...   297   1e-78
ref|XP_003540105.1| PREDICTED: TATA-binding protein-associated f...   296   2e-78
ref|XP_003633864.1| PREDICTED: TATA-binding protein-associated f...   238   8e-61
ref|XP_003633863.1| PREDICTED: TATA-binding protein-associated f...   238   8e-61

>ref|XP_003534431.1| PREDICTED: TATA-binding protein-associated factor 172-like isoform 2
            [Glycine max]
          Length = 2064

 Score =  297 bits (760), Expect = 1e-78
 Identities = 155/200 (77%), Positives = 159/200 (79%), Gaps = 1/200 (0%)
 Frame = +1

Query: 7    VLPACKSGLEDPXXXXXXXXXXXXXXXXXXXXXXQGQTLHSIVMXXXXXXXXXXXXSPST 186
            VLP+CKSGLEDP                      QGQTLHSIVM            SPST
Sbjct: 610  VLPSCKSGLEDPDDDVRAVAADALIPAASAIVSLQGQTLHSIVMLLWDILLDLDDLSPST 669

Query: 187  SSVMNLLAEIYSQEEMVPNMYKVFKLEDNEMENGAGGCDD-DGEENPYVLSTLAPRLWPF 363
            SSVMNLLAEIYSQE+M P MYKVFKL +NEMENG GGC D DGEENPYVLSTLAPRLWPF
Sbjct: 670  SSVMNLLAEIYSQEDMAPKMYKVFKLAENEMENGVGGCGDVDGEENPYVLSTLAPRLWPF 729

Query: 364  MRHSITSVRYSAIRTLERLLEAGYKRSMSELSSGSFWPSFIFGDTLRIVFQNLLLETNED 543
            MRHSITSVRYSAIRTLERLLEAGYKRSMSELSS SFWPSFIFGDTLRIVFQNLLLETNED
Sbjct: 730  MRHSITSVRYSAIRTLERLLEAGYKRSMSELSSVSFWPSFIFGDTLRIVFQNLLLETNED 789

Query: 544  ILQCSERVWSLLVQCSVEDL 603
            IL+CSERVWSLLVQCSVEDL
Sbjct: 790  ILRCSERVWSLLVQCSVEDL 809


>ref|XP_003534430.1| PREDICTED: TATA-binding protein-associated factor 172-like isoform 1
            [Glycine max]
          Length = 2047

 Score =  297 bits (760), Expect = 1e-78
 Identities = 155/200 (77%), Positives = 159/200 (79%), Gaps = 1/200 (0%)
 Frame = +1

Query: 7    VLPACKSGLEDPXXXXXXXXXXXXXXXXXXXXXXQGQTLHSIVMXXXXXXXXXXXXSPST 186
            VLP+CKSGLEDP                      QGQTLHSIVM            SPST
Sbjct: 593  VLPSCKSGLEDPDDDVRAVAADALIPAASAIVSLQGQTLHSIVMLLWDILLDLDDLSPST 652

Query: 187  SSVMNLLAEIYSQEEMVPNMYKVFKLEDNEMENGAGGCDD-DGEENPYVLSTLAPRLWPF 363
            SSVMNLLAEIYSQE+M P MYKVFKL +NEMENG GGC D DGEENPYVLSTLAPRLWPF
Sbjct: 653  SSVMNLLAEIYSQEDMAPKMYKVFKLAENEMENGVGGCGDVDGEENPYVLSTLAPRLWPF 712

Query: 364  MRHSITSVRYSAIRTLERLLEAGYKRSMSELSSGSFWPSFIFGDTLRIVFQNLLLETNED 543
            MRHSITSVRYSAIRTLERLLEAGYKRSMSELSS SFWPSFIFGDTLRIVFQNLLLETNED
Sbjct: 713  MRHSITSVRYSAIRTLERLLEAGYKRSMSELSSVSFWPSFIFGDTLRIVFQNLLLETNED 772

Query: 544  ILQCSERVWSLLVQCSVEDL 603
            IL+CSERVWSLLVQCSVEDL
Sbjct: 773  ILRCSERVWSLLVQCSVEDL 792


>ref|XP_003540105.1| PREDICTED: TATA-binding protein-associated factor 172-like [Glycine
            max]
          Length = 2047

 Score =  296 bits (758), Expect = 2e-78
 Identities = 155/201 (77%), Positives = 158/201 (78%), Gaps = 1/201 (0%)
 Frame = +1

Query: 4    RVLPACKSGLEDPXXXXXXXXXXXXXXXXXXXXXXQGQTLHSIVMXXXXXXXXXXXXSPS 183
            RVLPACKSGLEDP                      QGQTLHSIVM            SPS
Sbjct: 592  RVLPACKSGLEDPDDDVRAVAADALIPAASAIVSLQGQTLHSIVMLLWDILLDLDDLSPS 651

Query: 184  TSSVMNLLAEIYSQEEMVPNMYKVFKLEDNEMENGAGGCDD-DGEENPYVLSTLAPRLWP 360
            TSSVMNLLAEIYSQE+M P MY VFKL DN+MENG  GC D DGEENPYVLSTLAPRLWP
Sbjct: 652  TSSVMNLLAEIYSQEDMAPKMYTVFKLADNQMENGVDGCYDVDGEENPYVLSTLAPRLWP 711

Query: 361  FMRHSITSVRYSAIRTLERLLEAGYKRSMSELSSGSFWPSFIFGDTLRIVFQNLLLETNE 540
            FMRH+ITSVRYSAIRTLERLLEAGYKRSMSELSS SFWPSFIFGDTLRIVFQNLLLETNE
Sbjct: 712  FMRHTITSVRYSAIRTLERLLEAGYKRSMSELSSASFWPSFIFGDTLRIVFQNLLLETNE 771

Query: 541  DILQCSERVWSLLVQCSVEDL 603
            DILQCSERVWSLLVQCSVEDL
Sbjct: 772  DILQCSERVWSLLVQCSVEDL 792


>ref|XP_003633864.1| PREDICTED: TATA-binding protein-associated factor 172 isoform 3
            [Vitis vinifera]
          Length = 2060

 Score =  238 bits (606), Expect = 8e-61
 Identities = 131/206 (63%), Positives = 145/206 (70%), Gaps = 7/206 (3%)
 Frame = +1

Query: 7    VLPACKSGLEDPXXXXXXXXXXXXXXXXXXXXXXQGQTLHSIVMXXXXXXXXXXXXSPST 186
            VLPACK+GLEDP                      +GQTLHSIVM            SPST
Sbjct: 601  VLPACKTGLEDPDDDVRAVAADALIPTAASIVSLKGQTLHSIVMLLWDILLDLDDLSPST 660

Query: 187  SSVMNLLAEIYSQEEMVPNMYKVF-KLEDNEMENGAGGCDDD-GE-----ENPYVLSTLA 345
            SSVMNLLAEIYSQEEM+P M+      E  E++     C DD GE     ENPY+LSTLA
Sbjct: 661  SSVMNLLAEIYSQEEMIPKMFGALASKEKQELDLNEVVCIDDLGEGINIQENPYMLSTLA 720

Query: 346  PRLWPFMRHSITSVRYSAIRTLERLLEAGYKRSMSELSSGSFWPSFIFGDTLRIVFQNLL 525
            PRLWPFMRHSITSVRYSAIRTLERLLEAGYK+++SE S+ SFWPSFI GDTLRIVFQNLL
Sbjct: 721  PRLWPFMRHSITSVRYSAIRTLERLLEAGYKKNISEPSTSSFWPSFILGDTLRIVFQNLL 780

Query: 526  LETNEDILQCSERVWSLLVQCSVEDL 603
            LE+NE+I QCSERVW LL+QCSV DL
Sbjct: 781  LESNEEISQCSERVWRLLLQCSVGDL 806


>ref|XP_003633863.1| PREDICTED: TATA-binding protein-associated factor 172 isoform 2
            [Vitis vinifera]
          Length = 2089

 Score =  238 bits (606), Expect = 8e-61
 Identities = 131/206 (63%), Positives = 145/206 (70%), Gaps = 7/206 (3%)
 Frame = +1

Query: 7    VLPACKSGLEDPXXXXXXXXXXXXXXXXXXXXXXQGQTLHSIVMXXXXXXXXXXXXSPST 186
            VLPACK+GLEDP                      +GQTLHSIVM            SPST
Sbjct: 630  VLPACKTGLEDPDDDVRAVAADALIPTAASIVSLKGQTLHSIVMLLWDILLDLDDLSPST 689

Query: 187  SSVMNLLAEIYSQEEMVPNMYKVF-KLEDNEMENGAGGCDDD-GE-----ENPYVLSTLA 345
            SSVMNLLAEIYSQEEM+P M+      E  E++     C DD GE     ENPY+LSTLA
Sbjct: 690  SSVMNLLAEIYSQEEMIPKMFGALASKEKQELDLNEVVCIDDLGEGINIQENPYMLSTLA 749

Query: 346  PRLWPFMRHSITSVRYSAIRTLERLLEAGYKRSMSELSSGSFWPSFIFGDTLRIVFQNLL 525
            PRLWPFMRHSITSVRYSAIRTLERLLEAGYK+++SE S+ SFWPSFI GDTLRIVFQNLL
Sbjct: 750  PRLWPFMRHSITSVRYSAIRTLERLLEAGYKKNISEPSTSSFWPSFILGDTLRIVFQNLL 809

Query: 526  LETNEDILQCSERVWSLLVQCSVEDL 603
            LE+NE+I QCSERVW LL+QCSV DL
Sbjct: 810  LESNEEISQCSERVWRLLLQCSVGDL 835


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