BLASTX nr result

ID: Glycyrrhiza23_contig00018283 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00018283
         (1119 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003626391.1| 5'-3' exoribonuclease [Medicago truncatula] ...   498   e-139
ref|XP_003626390.1| 5'-3' exoribonuclease [Medicago truncatula] ...   498   e-139
ref|XP_003521740.1| PREDICTED: 5'-3' exoribonuclease 4-like [Gly...   494   e-137
ref|XP_003554686.1| PREDICTED: 5'-3' exoribonuclease 4-like [Gly...   493   e-137
ref|XP_003556487.1| PREDICTED: 5'-3' exoribonuclease 4-like [Gly...   467   e-129

>ref|XP_003626391.1| 5'-3' exoribonuclease [Medicago truncatula]
            gi|355501406|gb|AES82609.1| 5'-3' exoribonuclease
            [Medicago truncatula]
          Length = 629

 Score =  498 bits (1283), Expect = e-139
 Identities = 247/326 (75%), Positives = 262/326 (80%), Gaps = 1/326 (0%)
 Frame = +1

Query: 145  MGVPAFYRWLADRYPLSIVDVVEEEPATG-AGGVPLPVDVTRPNPNGMEFDNMYLDMNGI 321
            MGVPAFYRWLADRYP SIVDVVEE P+   AGG P PVDV+RPNPNGMEFDN+YLDMNGI
Sbjct: 1    MGVPAFYRWLADRYPRSIVDVVEEAPSPSVAGGPPFPVDVSRPNPNGMEFDNLYLDMNGI 60

Query: 322  IHPCFHPDGKPAPATYEDVFKSIFDYIDHLFSLVRPRKVLYLAIDGVAPRAKMNQQRSXX 501
            IHPCFHPDGKPAPATY+DVFKS+FDYIDHLFSLVRPRK+LYLAIDGVAPRAKMNQQRS  
Sbjct: 61   IHPCFHPDGKPAPATYDDVFKSMFDYIDHLFSLVRPRKLLYLAIDGVAPRAKMNQQRSRR 120

Query: 502  XXXXXXXXXXXXXXXXXXXXXXXXXXLLSSKDKPETHDSNVITPGTPFMAVLSVALQYYV 681
                                      LL+SK+K ETHDSNVITPGTPFMAVLSVALQYY+
Sbjct: 121  FRAAKDAAEAEAEEERLRNEFADQIELLTSKEKTETHDSNVITPGTPFMAVLSVALQYYI 180

Query: 682  QTRLNYNPGWRNTKVILSDSNVPGEGEHKIMEYIRLQRNLPGFNPNTQHCLYGLDADLIM 861
            QTRLNYNPGWRNTKV+LSDSNVPGEGEHKIM+YIRLQRNLPGF+PNT+HCLYGL      
Sbjct: 181  QTRLNYNPGWRNTKVMLSDSNVPGEGEHKIMDYIRLQRNLPGFDPNTRHCLYGL------ 234

Query: 862  XXXXXXXXXXXXXXXXXDADLIMLSLATHEVHFSILREVITLPGQQEKCYACGQVGHLAA 1041
                             DADLIMLSLATHE+HFSILREVIT PGQQEKCY CGQVGHLAA
Sbjct: 235  -----------------DADLIMLSLATHEIHFSILREVITFPGQQEKCYMCGQVGHLAA 277

Query: 1042 ECRGRPGDKAEDWNPVDDTPIHKKKY 1119
            ECRG+PGD A DW PVDDTPIHKKKY
Sbjct: 278  ECRGKPGDNALDW-PVDDTPIHKKKY 302


>ref|XP_003626390.1| 5'-3' exoribonuclease [Medicago truncatula]
            gi|355501405|gb|AES82608.1| 5'-3' exoribonuclease
            [Medicago truncatula]
          Length = 956

 Score =  498 bits (1283), Expect = e-139
 Identities = 247/326 (75%), Positives = 262/326 (80%), Gaps = 1/326 (0%)
 Frame = +1

Query: 145  MGVPAFYRWLADRYPLSIVDVVEEEPATG-AGGVPLPVDVTRPNPNGMEFDNMYLDMNGI 321
            MGVPAFYRWLADRYP SIVDVVEE P+   AGG P PVDV+RPNPNGMEFDN+YLDMNGI
Sbjct: 1    MGVPAFYRWLADRYPRSIVDVVEEAPSPSVAGGPPFPVDVSRPNPNGMEFDNLYLDMNGI 60

Query: 322  IHPCFHPDGKPAPATYEDVFKSIFDYIDHLFSLVRPRKVLYLAIDGVAPRAKMNQQRSXX 501
            IHPCFHPDGKPAPATY+DVFKS+FDYIDHLFSLVRPRK+LYLAIDGVAPRAKMNQQRS  
Sbjct: 61   IHPCFHPDGKPAPATYDDVFKSMFDYIDHLFSLVRPRKLLYLAIDGVAPRAKMNQQRSRR 120

Query: 502  XXXXXXXXXXXXXXXXXXXXXXXXXXLLSSKDKPETHDSNVITPGTPFMAVLSVALQYYV 681
                                      LL+SK+K ETHDSNVITPGTPFMAVLSVALQYY+
Sbjct: 121  FRAAKDAAEAEAEEERLRNEFADQIELLTSKEKTETHDSNVITPGTPFMAVLSVALQYYI 180

Query: 682  QTRLNYNPGWRNTKVILSDSNVPGEGEHKIMEYIRLQRNLPGFNPNTQHCLYGLDADLIM 861
            QTRLNYNPGWRNTKV+LSDSNVPGEGEHKIM+YIRLQRNLPGF+PNT+HCLYGL      
Sbjct: 181  QTRLNYNPGWRNTKVMLSDSNVPGEGEHKIMDYIRLQRNLPGFDPNTRHCLYGL------ 234

Query: 862  XXXXXXXXXXXXXXXXXDADLIMLSLATHEVHFSILREVITLPGQQEKCYACGQVGHLAA 1041
                             DADLIMLSLATHE+HFSILREVIT PGQQEKCY CGQVGHLAA
Sbjct: 235  -----------------DADLIMLSLATHEIHFSILREVITFPGQQEKCYMCGQVGHLAA 277

Query: 1042 ECRGRPGDKAEDWNPVDDTPIHKKKY 1119
            ECRG+PGD A DW PVDDTPIHKKKY
Sbjct: 278  ECRGKPGDNALDW-PVDDTPIHKKKY 302


>ref|XP_003521740.1| PREDICTED: 5'-3' exoribonuclease 4-like [Glycine max]
          Length = 960

 Score =  494 bits (1271), Expect = e-137
 Identities = 246/330 (74%), Positives = 260/330 (78%), Gaps = 5/330 (1%)
 Frame = +1

Query: 145  MGVPAFYRWLADRYPLSIVDVVEEEPATGAGGVPLPVDVTRPNPNGMEFDNMYLDMNGII 324
            MGVPAFYRWLADRYPLSI DVVEEEP+ G+G V    DV++PNPNGMEFDN+YLDMNGII
Sbjct: 1    MGVPAFYRWLADRYPLSIADVVEEEPSVGSGAV----DVSKPNPNGMEFDNLYLDMNGII 56

Query: 325  HPCFHPDGKPAPATYEDVFKSIFDYIDHLFSLVRPRKVLYLAIDGVAPRAKMNQQRSXXX 504
            HPCFHPDGK AP TYEDVFKSIFDYIDH+FSLVRPRK+LYLAIDGVAPRAKMNQQRS   
Sbjct: 57   HPCFHPDGKSAPTTYEDVFKSIFDYIDHIFSLVRPRKLLYLAIDGVAPRAKMNQQRSRRF 116

Query: 505  XXXXXXXXXXXXXXXXXXXXXXXXX-----LLSSKDKPETHDSNVITPGTPFMAVLSVAL 669
                                          LLSSK KPET+DSNVITPGTPFM VLSVAL
Sbjct: 117  RAAKDAAEKDAAEAEAEIERLREEFEGEMKLLSSKVKPETYDSNVITPGTPFMGVLSVAL 176

Query: 670  QYYVQTRLNYNPGWRNTKVILSDSNVPGEGEHKIMEYIRLQRNLPGFNPNTQHCLYGLDA 849
            QYY+QTRLNYNPGWRNTKVILSDSNVPGEGEHKIM+YIRLQRNLPGFNPNT+HCLYGL  
Sbjct: 177  QYYIQTRLNYNPGWRNTKVILSDSNVPGEGEHKIMDYIRLQRNLPGFNPNTRHCLYGL-- 234

Query: 850  DLIMXXXXXXXXXXXXXXXXXDADLIMLSLATHEVHFSILREVITLPGQQEKCYACGQVG 1029
                                 DADLIMLSLATHEVHFSILREVIT PGQQEKC+ CGQVG
Sbjct: 235  ---------------------DADLIMLSLATHEVHFSILREVITFPGQQEKCFQCGQVG 273

Query: 1030 HLAAECRGRPGDKAEDWNPVDDTPIHKKKY 1119
            H AAECRG+PG+KAEDWNPVDDTPIHKKKY
Sbjct: 274  HFAAECRGKPGEKAEDWNPVDDTPIHKKKY 303


>ref|XP_003554686.1| PREDICTED: 5'-3' exoribonuclease 4-like [Glycine max]
          Length = 957

 Score =  493 bits (1268), Expect = e-137
 Identities = 245/330 (74%), Positives = 261/330 (79%), Gaps = 5/330 (1%)
 Frame = +1

Query: 145  MGVPAFYRWLADRYPLSIVDVVEEEPATGAGGVPLPVDVTRPNPNGMEFDNMYLDMNGII 324
            MGVPAFYRWLADRYPLSI DVVEE+P+ GA      VDV++PNP+GMEFDN+YLDMNGII
Sbjct: 1    MGVPAFYRWLADRYPLSITDVVEEDPSAGA------VDVSKPNPSGMEFDNLYLDMNGII 54

Query: 325  HPCFHPDGKPAPATYEDVFKSIFDYIDHLFSLVRPRKVLYLAIDGVAPRAKMNQQRSXXX 504
            HPCFHPDGKPAPATYEDVFKSIFDYIDH+FSLVRPRK+LYLAIDGVAPRAKMNQQRS   
Sbjct: 55   HPCFHPDGKPAPATYEDVFKSIFDYIDHIFSLVRPRKLLYLAIDGVAPRAKMNQQRSRRF 114

Query: 505  XXXXXXXXXXXXXXXXXXXXXXXXX-----LLSSKDKPETHDSNVITPGTPFMAVLSVAL 669
                                          LLSSKDKPET+DSNVITPGTPFM VLSVAL
Sbjct: 115  RAAKDAAEKDAAEAEAEIERLREEFEGEMKLLSSKDKPETYDSNVITPGTPFMGVLSVAL 174

Query: 670  QYYVQTRLNYNPGWRNTKVILSDSNVPGEGEHKIMEYIRLQRNLPGFNPNTQHCLYGLDA 849
            QYY+QTRLNYNPGW NTKVILSDSNVPGEGEHKIM+YIRLQRNLPGFNPNT+HCLYGL  
Sbjct: 175  QYYIQTRLNYNPGWWNTKVILSDSNVPGEGEHKIMDYIRLQRNLPGFNPNTRHCLYGL-- 232

Query: 850  DLIMXXXXXXXXXXXXXXXXXDADLIMLSLATHEVHFSILREVITLPGQQEKCYACGQVG 1029
                                 DADLIMLSLATHEVHFSILREVIT PGQQEKC+ CGQ+G
Sbjct: 233  ---------------------DADLIMLSLATHEVHFSILREVITFPGQQEKCFQCGQLG 271

Query: 1030 HLAAECRGRPGDKAEDWNPVDDTPIHKKKY 1119
            H AAECRG+PG+KAEDWNPVDDTPIHKKKY
Sbjct: 272  HFAAECRGKPGEKAEDWNPVDDTPIHKKKY 301


>ref|XP_003556487.1| PREDICTED: 5'-3' exoribonuclease 4-like [Glycine max]
          Length = 931

 Score =  467 bits (1201), Expect = e-129
 Identities = 228/325 (70%), Positives = 251/325 (77%)
 Frame = +1

Query: 145  MGVPAFYRWLADRYPLSIVDVVEEEPATGAGGVPLPVDVTRPNPNGMEFDNMYLDMNGII 324
            MGVPAFYRWLADRYPLSI DVVEE+PA G  GVP P+D ++PNPNGMEFDN+YLDMNGII
Sbjct: 1    MGVPAFYRWLADRYPLSIADVVEEDPAVGDDGVPFPIDASKPNPNGMEFDNLYLDMNGII 60

Query: 325  HPCFHPDGKPAPATYEDVFKSIFDYIDHLFSLVRPRKVLYLAIDGVAPRAKMNQQRSXXX 504
            HPCFHPDGKPAPATY+DVFKSIFDY+DHL++LVRPRK+LYLAIDGVAPRAKMNQQRS   
Sbjct: 61   HPCFHPDGKPAPATYDDVFKSIFDYLDHLYTLVRPRKLLYLAIDGVAPRAKMNQQRSRRF 120

Query: 505  XXXXXXXXXXXXXXXXXXXXXXXXXLLSSKDKPETHDSNVITPGTPFMAVLSVALQYYVQ 684
                                     +LSSKDKPET DSNVITPGT FM  LSV+LQYY+Q
Sbjct: 121  RAAKDAAEAEAEEERLRKEFQSEGKVLSSKDKPETSDSNVITPGTQFMVALSVSLQYYIQ 180

Query: 685  TRLNYNPGWRNTKVILSDSNVPGEGEHKIMEYIRLQRNLPGFNPNTQHCLYGLDADLIMX 864
            TRLN+NP WRNTKVILSDSN PGEGEHKIMEYIRLQRNLPGFNPNT+HCLYGL       
Sbjct: 181  TRLNHNPSWRNTKVILSDSNAPGEGEHKIMEYIRLQRNLPGFNPNTRHCLYGL------- 233

Query: 865  XXXXXXXXXXXXXXXXDADLIMLSLATHEVHFSILREVITLPGQQEKCYACGQVGHLAAE 1044
                            DADLIMLSLATHEVHFSILREV+TLPGQQ+KC+ CGQ GH AA+
Sbjct: 234  ----------------DADLIMLSLATHEVHFSILREVVTLPGQQDKCFLCGQAGHFAAD 277

Query: 1045 CRGRPGDKAEDWNPVDDTPIHKKKY 1119
            C      +AED++  DD+PIHKKKY
Sbjct: 278  C------QAEDFDTPDDSPIHKKKY 296


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