BLASTX nr result

ID: Glycyrrhiza23_contig00018256 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00018256
         (255 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003612234.1| ATP synthase subunit a chloroplastic [Medica...   100   1e-19
ref|XP_003612233.1| ATP synthase subunit a chloroplastic [Medica...   100   1e-19
ref|XP_003516540.1| PREDICTED: uncharacterized protein LOC100803...    94   2e-17
ref|XP_003538889.1| PREDICTED: uncharacterized protein LOC100811...    92   4e-17
ref|XP_003519856.1| PREDICTED: uncharacterized protein LOC100819...    55   8e-06

>ref|XP_003612234.1| ATP synthase subunit a chloroplastic [Medicago truncatula]
           gi|355513569|gb|AES95192.1| ATP synthase subunit a
           chloroplastic [Medicago truncatula]
          Length = 535

 Score =  100 bits (250), Expect = 1e-19
 Identities = 53/84 (63%), Positives = 60/84 (71%)
 Frame = +3

Query: 3   GDKXXXXXXXXXXXMPPSVQLPNVKTLGVLNHEMLAEQVQNIALETTNYDGAGGLDVLPD 182
           GDK           MP  VQ PNV +  VLN +MLAE+++NIALETT YDGAGG  VLPD
Sbjct: 289 GDKIRRQNDWEKWIMPSPVQFPNVTSPEVLNQDMLAEKMRNIALETTIYDGAGGPVVLPD 348

Query: 183 TSQHKPAFGDLNSPLQLSTSEGTG 254
            S+H PAFGDL+SPLQLSTSE TG
Sbjct: 349 NSEHTPAFGDLSSPLQLSTSEITG 372


>ref|XP_003612233.1| ATP synthase subunit a chloroplastic [Medicago truncatula]
           gi|355513568|gb|AES95191.1| ATP synthase subunit a
           chloroplastic [Medicago truncatula]
          Length = 670

 Score =  100 bits (250), Expect = 1e-19
 Identities = 53/84 (63%), Positives = 60/84 (71%)
 Frame = +3

Query: 3   GDKXXXXXXXXXXXMPPSVQLPNVKTLGVLNHEMLAEQVQNIALETTNYDGAGGLDVLPD 182
           GDK           MP  VQ PNV +  VLN +MLAE+++NIALETT YDGAGG  VLPD
Sbjct: 424 GDKIRRQNDWEKWIMPSPVQFPNVTSPEVLNQDMLAEKMRNIALETTIYDGAGGPVVLPD 483

Query: 183 TSQHKPAFGDLNSPLQLSTSEGTG 254
            S+H PAFGDL+SPLQLSTSE TG
Sbjct: 484 NSEHTPAFGDLSSPLQLSTSEITG 507


>ref|XP_003516540.1| PREDICTED: uncharacterized protein LOC100803372 [Glycine max]
          Length = 501

 Score = 93.6 bits (231), Expect = 2e-17
 Identities = 50/81 (61%), Positives = 55/81 (67%)
 Frame = +3

Query: 3   GDKXXXXXXXXXXXMPPSVQLPNVKTLGVLNHEMLAEQVQNIALETTNYDGAGGLDVLPD 182
           GDK           M P VQ  N  T+GVLN + LAEQVQNIALET+NYDGAGGLDV PD
Sbjct: 410 GDKIRRQNDWRRWIMHPPVQFSNATTIGVLNPDKLAEQVQNIALETSNYDGAGGLDVQPD 469

Query: 183 TSQHKPAFGDLNSPLQLSTSE 245
           TSQH+  FGDL    QLSTS+
Sbjct: 470 TSQHRSTFGDLQ---QLSTSQ 487


>ref|XP_003538889.1| PREDICTED: uncharacterized protein LOC100811819 [Glycine max]
          Length = 510

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 50/84 (59%), Positives = 56/84 (66%)
 Frame = +3

Query: 3   GDKXXXXXXXXXXXMPPSVQLPNVKTLGVLNHEMLAEQVQNIALETTNYDGAGGLDVLPD 182
           GDK           M P VQ  N  T+GVLN +MLAEQV NIALET++YDGAGG DVLPD
Sbjct: 407 GDKIRRRNDWRRWIMHPPVQFSNATTIGVLNPDMLAEQVHNIALETSDYDGAGGPDVLPD 466

Query: 183 TSQHKPAFGDLNSPLQLSTSEGTG 254
           TS+H+  F D    LQLSTSEG G
Sbjct: 467 TSRHRSTFRD----LQLSTSEGPG 486


>ref|XP_003519856.1| PREDICTED: uncharacterized protein LOC100819612 [Glycine max]
          Length = 497

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 37/67 (55%), Positives = 43/67 (64%)
 Frame = +3

Query: 51  PSVQLPNVKTLGVLNHEMLAEQVQNIALETTNYDGAGGLDVLPDTSQHKPAFGDLNSPLQ 230
           P  Q+PNV+  G      LAE+VQNI LE TN + AG LDV    SQ++P FGDLNS   
Sbjct: 422 PGGQVPNVR--GSQTVGQLAERVQNITLERTNNNDAGVLDV----SQNRP-FGDLNSQYL 474

Query: 231 LSTSEGT 251
            STSEGT
Sbjct: 475 HSTSEGT 481


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