BLASTX nr result

ID: Glycyrrhiza23_contig00018227 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00018227
         (609 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002322958.1| predicted protein [Populus trichocarpa] gi|2...   265   5e-69
ref|XP_002273894.1| PREDICTED: UPF0503 protein At3g09070, chloro...   256   2e-66
ref|XP_002534570.1| conserved hypothetical protein [Ricinus comm...   256   3e-66
ref|XP_002308207.1| predicted protein [Populus trichocarpa] gi|2...   256   3e-66
ref|XP_004171704.1| PREDICTED: UPF0503 protein At3g09070, chloro...   251   9e-65

>ref|XP_002322958.1| predicted protein [Populus trichocarpa] gi|222867588|gb|EEF04719.1|
           predicted protein [Populus trichocarpa]
          Length = 628

 Score =  265 bits (677), Expect = 5e-69
 Identities = 139/201 (69%), Positives = 158/201 (78%)
 Frame = -3

Query: 604 LRPMKEHMDLDSQAKKSSGRDLKEIAGSFWSAASVFSXXXXXXXXXXXXXXXXXXXXXAV 425
           L+ MK+H+DLDSQ+KK+SGRD KEIAGSFWSAASVFS                       
Sbjct: 211 LKTMKDHIDLDSQSKKTSGRDFKEIAGSFWSAASVFSKKLQKWRQKQKLKKQRN------ 264

Query: 424 SGSSSALLPVEKPIGRQFRETQSEIADYGFGRRSCDTDPRFSLDAARMSFDDPRYSFDEP 245
            G  SA LPVEKPIGRQ+RETQSEIADYGFGRRSCDTDPRFSLDA R+SFDDPRYSFDEP
Sbjct: 265 DGPGSATLPVEKPIGRQYRETQSEIADYGFGRRSCDTDPRFSLDAGRISFDDPRYSFDEP 324

Query: 244 RASWDGYLIGRTFPRMPLPTMLSVVEDAPVPVVLRTDSLIPVEDPTAAADDTGSNININI 65
           RASWDGYLIGRTFPRM  PTM+SVVEDAPV VVLR+D+ IPVE+P   + ++  N +  +
Sbjct: 325 RASWDGYLIGRTFPRM--PTMVSVVEDAPVNVVLRSDTQIPVEEPPRISMNS-INEDEAV 381

Query: 64  PGGSAQTKEYYSDSSARRRKS 2
           PGGSAQT++YYSDSS+RRRKS
Sbjct: 382 PGGSAQTRDYYSDSSSRRRKS 402


>ref|XP_002273894.1| PREDICTED: UPF0503 protein At3g09070, chloroplastic-like [Vitis
           vinifera]
          Length = 663

 Score =  256 bits (654), Expect = 2e-66
 Identities = 137/200 (68%), Positives = 154/200 (77%)
 Frame = -3

Query: 601 RPMKEHMDLDSQAKKSSGRDLKEIAGSFWSAASVFSXXXXXXXXXXXXXXXXXXXXXAVS 422
           + MK+H+DLDSQ KK  GRDLKEIAGSFWSAASVFS                       +
Sbjct: 237 KTMKDHIDLDSQNKKPPGRDLKEIAGSFWSAASVFSKKLQKWRRKQKMKKRD-------N 289

Query: 421 GSSSALLPVEKPIGRQFRETQSEIADYGFGRRSCDTDPRFSLDAARMSFDDPRYSFDEPR 242
           G  SA LPVEKPIGRQ+RETQSEIADYGFGRRSCDTDPRFSLDA R+SFDDPRYSFDEPR
Sbjct: 290 GGGSATLPVEKPIGRQYRETQSEIADYGFGRRSCDTDPRFSLDAGRISFDDPRYSFDEPR 349

Query: 241 ASWDGYLIGRTFPRMPLPTMLSVVEDAPVPVVLRTDSLIPVEDPTAAADDTGSNININIP 62
           ASWDGYLIGRTFPR  LP M+SVVEDAPVP V R+D+ IPVE+P     ++  N + +IP
Sbjct: 350 ASWDGYLIGRTFPR--LPPMVSVVEDAPVP-VQRSDNQIPVEEPR----NSSVNEDESIP 402

Query: 61  GGSAQTKEYYSDSSARRRKS 2
           GGSAQT++YYSDSS+RRRKS
Sbjct: 403 GGSAQTRDYYSDSSSRRRKS 422


>ref|XP_002534570.1| conserved hypothetical protein [Ricinus communis]
           gi|223525005|gb|EEF27813.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 676

 Score =  256 bits (653), Expect = 3e-66
 Identities = 139/204 (68%), Positives = 153/204 (75%), Gaps = 3/204 (1%)
 Frame = -3

Query: 604 LRPMKEHMDLDSQAKKSSGRDLKEIAGSFWSAASVFSXXXXXXXXXXXXXXXXXXXXXAV 425
           ++PMK+H+DLDSQ KK SGRD KEIAGSFWSAASVFS                       
Sbjct: 241 IKPMKDHIDLDSQTKKGSGRDFKEIAGSFWSAASVFSKKLQKWRQKQKLNNNNKKRR--- 297

Query: 424 SGSSSALLPVEKPIGRQFRETQSEIADYGFGRRSCDTDPRFSLDAARMSFDDPRYSFDEP 245
               SA LPVEKPIGRQ+RETQSEIADYGFGRRSCDTDPRFSLDA R+SFDD RYSFDEP
Sbjct: 298 -NGGSATLPVEKPIGRQYRETQSEIADYGFGRRSCDTDPRFSLDAGRISFDDSRYSFDEP 356

Query: 244 RASWDGYLIG-RTFPRMPLPTMLSVVEDAPVPVVLRTDSLIPVEDP--TAAADDTGSNIN 74
           RASWDGYLIG R FPRM  PTMLSVVEDAPV VVLR+D+ IPVE+P  +   DDT     
Sbjct: 357 RASWDGYLIGTRNFPRM--PTMLSVVEDAPVNVVLRSDTQIPVEEPRNSIHEDDT----- 409

Query: 73  INIPGGSAQTKEYYSDSSARRRKS 2
             +PGGSAQT++YYSDSS+RRRKS
Sbjct: 410 --LPGGSAQTRDYYSDSSSRRRKS 431


>ref|XP_002308207.1| predicted protein [Populus trichocarpa] gi|222854183|gb|EEE91730.1|
           predicted protein [Populus trichocarpa]
          Length = 686

 Score =  256 bits (653), Expect = 3e-66
 Identities = 137/206 (66%), Positives = 157/206 (76%), Gaps = 5/206 (2%)
 Frame = -3

Query: 604 LRPMKEHMDLDSQAKKSSGRDLKEIAGSFWSAASVFSXXXXXXXXXXXXXXXXXXXXXAV 425
           L+ MK+H+DLDSQ+KK+SGRDLKEIAGSFWSAASVFS                       
Sbjct: 265 LKTMKDHIDLDSQSKKTSGRDLKEIAGSFWSAASVFSKKLQKWRQKQKLKKQRN------ 318

Query: 424 SGSSSALLPVEKPIGRQFRETQSEIADYGFGRRSCDTDPRFSLDAARMSFDDPRYSFDEP 245
            G  SA LPVEKPIGRQ+RETQSEIADYGFGRRSCDTDPRFSLDA R+SFDDPRYSFDEP
Sbjct: 319 GGPGSATLPVEKPIGRQYRETQSEIADYGFGRRSCDTDPRFSLDAGRISFDDPRYSFDEP 378

Query: 244 RASWDGYLIGRTFPRMPLPTMLSVVEDAP---VPVVLRTDSLIPVEDPTAAADDT--GSN 80
           RASWDGYLIGRTFPRM  PTM+SVVEDAP   V VV R+D+ IPVE+P   + ++    +
Sbjct: 379 RASWDGYLIGRTFPRM--PTMVSVVEDAPVNVVNVVSRSDTQIPVEEPPRISMNSINEDD 436

Query: 79  ININIPGGSAQTKEYYSDSSARRRKS 2
            +  +PGGS QT++YYSDSS+RRRKS
Sbjct: 437 EDETVPGGSVQTRDYYSDSSSRRRKS 462


>ref|XP_004171704.1| PREDICTED: UPF0503 protein At3g09070, chloroplastic-like [Cucumis
           sativus]
          Length = 662

 Score =  251 bits (640), Expect = 9e-65
 Identities = 133/200 (66%), Positives = 150/200 (75%)
 Frame = -3

Query: 601 RPMKEHMDLDSQAKKSSGRDLKEIAGSFWSAASVFSXXXXXXXXXXXXXXXXXXXXXAVS 422
           + +K+HMDLDSQ KK SGRD KEIAGSFWSAASVFS                       +
Sbjct: 252 KSIKDHMDLDSQPKKPSGRDFKEIAGSFWSAASVFSKKWQKWRDKQKLKKRR-------N 304

Query: 421 GSSSALLPVEKPIGRQFRETQSEIADYGFGRRSCDTDPRFSLDAARMSFDDPRYSFDEPR 242
           G  SA LPVEKPIGRQFRETQSEIADYG+GRRSCDTDPRFSLDA RMSFDDPRYSFDEPR
Sbjct: 305 GDISATLPVEKPIGRQFRETQSEIADYGYGRRSCDTDPRFSLDAGRMSFDDPRYSFDEPR 364

Query: 241 ASWDGYLIGRTFPRMPLPTMLSVVEDAPVPVVLRTDSLIPVEDPTAAADDTGSNININIP 62
           ASWDGYL+ RTF RM  PTMLSVVEDAP+  V RTD+ IPVE+P  + +D     +  +P
Sbjct: 365 ASWDGYLVSRTFTRM--PTMLSVVEDAPIH-VSRTDTQIPVEEPANSCND-----DETVP 416

Query: 61  GGSAQTKEYYSDSSARRRKS 2
           GGS QT++YYSDSS+RRR+S
Sbjct: 417 GGSEQTRDYYSDSSSRRRRS 436


Top