BLASTX nr result

ID: Glycyrrhiza23_contig00018224 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00018224
         (1071 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003544295.1| PREDICTED: zinc finger CCCH domain-containin...   352   7e-95
ref|XP_003519252.1| PREDICTED: zinc finger CCCH domain-containin...   351   2e-94
ref|XP_003615688.1| Zinc finger CCCH domain-containing protein [...   331   2e-88
emb|CAN78824.1| hypothetical protein VITISV_006556 [Vitis vinifera]   326   7e-87
ref|XP_002277632.2| PREDICTED: zinc finger CCCH domain-containin...   317   2e-84

>ref|XP_003544295.1| PREDICTED: zinc finger CCCH domain-containing protein 66-like
            [Glycine max]
          Length = 1089

 Score =  352 bits (904), Expect = 7e-95
 Identities = 211/376 (56%), Positives = 247/376 (65%), Gaps = 31/376 (8%)
 Frame = -3

Query: 1069 RPLYASTGSALPSPGSYSTGASSMD-----PFTLGSQSAXXXXXXXXXXXXTGACSPVSG 905
            RPLYASTGSA+PSP SYS  AS+++     P  LGS S             +GA SP++G
Sbjct: 726  RPLYASTGSAIPSPRSYSASASALEMGSVSPIALGSPSVLMPPTSTPPLTPSGASSPIAG 785

Query: 904  NTMWQNHTCAAVPALQLSRSRLKTALNARDADLDIELPGLENRQFMQQLLLEEMVGLSSP 725
            + MW      +VP LQL +SRLKTA  ARD DLDIEL GLE  +  QQL+++E+  LSSP
Sbjct: 786  S-MWSQSN-VSVPTLQLPKSRLKTASTARDIDLDIELLGLETHRRRQQLMMDEISALSSP 843

Query: 724  SKWKNSMPNSPSFPGSLGDHHIGELNRLGGVKPTNLEDFFGS------------------ 599
            + WKNSMPNSPSF   L DH   ELNRL GVKP NLED FGS                  
Sbjct: 844  N-WKNSMPNSPSFHVPLSDHT--ELNRLSGVKPANLEDMFGSLDPSILSKYHGISLDVAG 900

Query: 598  -QIQSPIGIQVHQNVNLQPRGYPSNLSASNVIGSPTFRADPSGAAATVAMNPRYAAFSKR 422
             Q+QSP GIQ+ QNVN Q  GY S+LS SNVIGS +FR D SG AATVA+NPR AAF+KR
Sbjct: 901  TQLQSPTGIQMRQNVNQQLGGYSSSLSTSNVIGSRSFRLDQSGEAATVALNPRAAAFAKR 960

Query: 421  SQSFIERGVASRNSELPSRATPVAVEASNFSCWGSPDGKLDWAIRGDELNRLRKXXXXXX 242
            SQSFIER V + +SE+PS         S FS WGSP GKLDWAI G+ELN+LRK      
Sbjct: 961  SQSFIERSVVNHHSEIPS------PNPSTFSNWGSPGGKLDWAINGEELNKLRKSASFGF 1014

Query: 241  XXXXSPLTMA---VPPN-DEEPDVSWVHSLVKDAPTAESGQYRVEEQ---LQCHNGTDVV 83
                SPLT A   +  N D+EPDVSWV+SLVKDAP  ESG+Y VE+    LQCHNGTD +
Sbjct: 1015 RSSSSPLTKASNKISANVDDEPDVSWVNSLVKDAP-PESGEYSVEDHRKLLQCHNGTDAI 1073

Query: 82   SAMLEQLHMEQEQMVA 35
             A LEQL+++QEQMVA
Sbjct: 1074 PAWLEQLYLDQEQMVA 1089


>ref|XP_003519252.1| PREDICTED: zinc finger CCCH domain-containing protein 66-like isoform
            1 [Glycine max] gi|356500870|ref|XP_003519253.1|
            PREDICTED: zinc finger CCCH domain-containing protein
            66-like isoform 2 [Glycine max]
          Length = 695

 Score =  351 bits (901), Expect = 2e-94
 Identities = 208/378 (55%), Positives = 246/378 (65%), Gaps = 33/378 (8%)
 Frame = -3

Query: 1069 RPLYASTGSALPSPGSYSTGAS-----SMDPFTLGSQSAXXXXXXXXXXXXTGACSPVSG 905
            RPLYASTGSA+PSP SYS  AS     S++P  LGS S             +GA SP++G
Sbjct: 328  RPLYASTGSAIPSPRSYSASASALEMGSVNPIALGSPSVLMPPTSTPPLTPSGASSPIAG 387

Query: 904  NTMWQNHTCAAVPALQLSRSRLKTALNARDADLDIELPGLENRQFMQQLLLEEMVGLSSP 725
            + MW      +VP LQL +SRLKTA   RD DLD+EL GLE     QQL+++E+  LSSP
Sbjct: 388  S-MWSQSN-VSVPTLQLPKSRLKTASTVRDTDLDMELLGLETHWRRQQLMMDEISALSSP 445

Query: 724  SKWKNSMPNSPSFPGSLGDHHIGELNRLGGVKPTNLEDFFGS------------------ 599
            + WKNSMPNSPSF   L DH  GELNRL GVKP NLED FGS                  
Sbjct: 446  N-WKNSMPNSPSFRVPLNDH-TGELNRLSGVKPANLEDMFGSLDPSILSKYHGISLDVAG 503

Query: 598  -QIQSPIGIQVHQNVNLQPRGYPSNLSASNVIGSPTFRADPSGAAATVAMNPRYAAFSKR 422
             Q+QSP GIQ+ QNVN Q  GY S+LS  NVIGS +FR D SG AA+VA+NPR AAF+KR
Sbjct: 504  PQLQSPTGIQMRQNVNQQLGGYSSSLSTLNVIGSRSFRLDQSGEAASVALNPRVAAFAKR 563

Query: 421  SQSFIERGVASRNSELPSRATPVAVEASNFSCWGSPDGKLDWAIRGDELNRLRKXXXXXX 242
            SQSFIERGV + +SELPS       + S FS WGSP GKLDWA+ G+ELN+LRK      
Sbjct: 564  SQSFIERGVVNHHSELPS------PKPSTFSNWGSPVGKLDWAVNGEELNKLRKSASFGF 617

Query: 241  XXXXSPLTMAVPPN----DEEPDVSWVHSLVKDAP--TAESGQYRVEEQ---LQCHNGTD 89
                +PLT          D+EPDVSWV+SLVKDAP  + ESG+Y VE+Q   LQCHNGTD
Sbjct: 618  RGSDTPLTKTSTKMSANVDDEPDVSWVNSLVKDAPPESGESGEYSVEDQRKLLQCHNGTD 677

Query: 88   VVSAMLEQLHMEQEQMVA 35
             + A LEQL+++QEQMVA
Sbjct: 678  AIPAWLEQLYLDQEQMVA 695


>ref|XP_003615688.1| Zinc finger CCCH domain-containing protein [Medicago truncatula]
            gi|355517023|gb|AES98646.1| Zinc finger CCCH
            domain-containing protein [Medicago truncatula]
          Length = 762

 Score =  331 bits (848), Expect = 2e-88
 Identities = 194/377 (51%), Positives = 237/377 (62%), Gaps = 33/377 (8%)
 Frame = -3

Query: 1069 RPLYASTGSALPSPGSYSTGASSMD-----PFTLGSQSAXXXXXXXXXXXXTGACSPVSG 905
            RPLYASTGSA+PSP SY + AS+++     P +LGS S             +GA SPV+ 
Sbjct: 332  RPLYASTGSAIPSPRSYYSTASTLEMGSISPMSLGSPSVLIPPSSTPPLTSSGASSPVAA 391

Query: 904  NTMWQNHTCAAVPALQLSRSRLKTALNARDADLDIELPGLENRQFMQQLLLEEMVGLSSP 725
              MWQ  +  ++P LQL +SRLKT + ARD + DI +  +E ++  QQLL++EM GLSSP
Sbjct: 392  TAMWQTPSNVSIPTLQLPKSRLKTGMTARDINSDIAMLRVETQRRKQQLLMDEMSGLSSP 451

Query: 724  SKWKNSMPNSPSFPGSLGDHHIGELNRLGGVKPTNLEDFF-------------------G 602
            S W +SMPNSPSFP S  +H  GELNR  GV PTNLEDFF                   G
Sbjct: 452  SNWNHSMPNSPSFPVSSTNHTTGELNRFSGVNPTNLEDFFGSLDPSMLHKFHGISLDSAG 511

Query: 601  SQIQSPIGIQVHQNVNLQ-PRGYPSNLSASNVIGSPTFRADPSGAAATVAMNPRYAAFSK 425
            SQ+QSP GIQ+  N+N    + Y S  S S+VIGSPT+R  PSG  +  A+N R AAFSK
Sbjct: 512  SQLQSPTGIQMRPNMNQHLQQNYSSGHSTSSVIGSPTYRFQPSGELSASALNARAAAFSK 571

Query: 424  RSQSFIERGVASRNSELPSRATPVAVEASNFSCWGSPDGKLDWAIRGDELNRLRKXXXXX 245
            RSQSFIERGV +R+SEL S A P A     FS WGSPDG LDW   G+ELN+LRK     
Sbjct: 572  RSQSFIERGVTNRHSELHSPAKPYA-----FSNWGSPDGNLDWTSHGEELNKLRKSSSFA 626

Query: 244  XXXXXSPLTMA---VPPNDEEPDVSWVHSLVKDAPTAESGQYRVEEQ---LQCH--NGTD 89
                 +PLT A      ND EPDVSWV++LVKDA   ES Q+ VE+Q   LQ H  NGTD
Sbjct: 627  FRTTSTPLTPAAARAQENDYEPDVSWVNTLVKDATPQESHQFSVEDQKRKLQRHLNNGTD 686

Query: 88   VVSAMLEQLHMEQEQMV 38
             + A LEQL+M+QEQ+V
Sbjct: 687  SIPAWLEQLYMDQEQIV 703


>emb|CAN78824.1| hypothetical protein VITISV_006556 [Vitis vinifera]
          Length = 893

 Score =  326 bits (835), Expect = 7e-87
 Identities = 193/376 (51%), Positives = 237/376 (63%), Gaps = 31/376 (8%)
 Frame = -3

Query: 1069 RPLYASTGSALPSPGSYSTGASSMD-----PFTLGSQSAXXXXXXXXXXXXTGACSPVSG 905
            RPLYASTGSA+PSP S+S GASS+D     P  LGS S             +G  SP+ G
Sbjct: 520  RPLYASTGSAVPSPRSFSVGASSLDMSPISPLALGSSSVLMPPTSTPPMTPSGVSSPMGG 579

Query: 904  NTMWQNHTCAAVPALQLSRSRLKTALNARDADLDIELPGLENRQFMQQLLLEEMVGLSSP 725
             TMWQN      P LQLS SRLK++L+ARD DLD+EL GLE+ +  QQ L++EM GLSSP
Sbjct: 580  -TMWQNQPNIIPPNLQLSGSRLKSSLSARDMDLDVELLGLESHRRRQQQLMDEMAGLSSP 638

Query: 724  SKWKNSMPNSPSFPGSLGDHHIGELNRLGGVKPTNLEDFFGS------------------ 599
            S W + +  S +F  S GD  IGELNRLGG+KPTNLED FGS                  
Sbjct: 639  SSWNSGLNTSAAFAASSGDL-IGELNRLGGMKPTNLEDIFGSLDPTILPQLQGLSMDAAA 697

Query: 598  -QIQSPIGIQVHQNVNLQPRG-YPSNLSASNVIGSPTFRADPSGAAATVAMNPRYAAFSK 425
             Q+QSP GIQ+ QN+N Q R  YP++LS+S V GS +F  DPSG+A    +N R AAF+K
Sbjct: 698  PQLQSPTGIQMRQNINQQLRSSYPASLSSSPVRGSASFGMDPSGSATAAVLNSRAAAFAK 757

Query: 424  RSQSFIERGVASRNSELPSRATPVAVEASNFSCWGSPDGKLDWAIRGDELNRLRKXXXXX 245
            RSQSFIER  A+R+S   S A+  AV  S  S WGSPDGKLDW I+G+ELN+LRK     
Sbjct: 758  RSQSFIERSAANRHSGFSSSASSAAVVPSPLSDWGSPDGKLDWGIQGEELNKLRKSASFG 817

Query: 244  XXXXXSPL---TMAVPPNDEEPDVSWVHSLVKDAPTAESGQYRVEEQLQCH---NGTDVV 83
                 S       +VP   +EPDVSWV SLVK+AP+A  GQ+  EEQ Q H    G++++
Sbjct: 818  FRSNGSSYAAQAASVPAAADEPDVSWVQSLVKEAPSARPGQFGYEEQHQYHLNSGGSEIL 877

Query: 82   SAMLEQLHMEQEQMVA 35
               +EQL +EQEQMVA
Sbjct: 878  PPWVEQLCVEQEQMVA 893


>ref|XP_002277632.2| PREDICTED: zinc finger CCCH domain-containing protein 66-like isoform
            1 [Vitis vinifera]
          Length = 693

 Score =  317 bits (813), Expect = 2e-84
 Identities = 191/376 (50%), Positives = 235/376 (62%), Gaps = 31/376 (8%)
 Frame = -3

Query: 1069 RPLYASTGSALPSPGSYSTGASSMD-----PFTLGSQSAXXXXXXXXXXXXTGACSPVSG 905
            RPLYASTGSA+PSP S+S GASS+D     P  LGS S             +G  SP+ G
Sbjct: 322  RPLYASTGSAVPSPRSFSVGASSLDMSPISPLALGSSSVLMPPTSTPPMTPSGVSSPMGG 381

Query: 904  NTMWQNHTCAAVPALQLSRSRLKTALNARDADLDIELPGLENRQFMQQLLLEEMVGLSSP 725
             TMWQN      P LQLS SRLK++L+ARD DLD+   GLE+ +  QQ L++EM GLSSP
Sbjct: 382  -TMWQNQPNIIPPNLQLSGSRLKSSLSARDMDLDVL--GLESHRRRQQQLMDEMAGLSSP 438

Query: 724  SKWKNSMPNSPSFPGSLGDHHIGELNRLGGVKPTNLEDFFGS------------------ 599
            S W + +  S +F  S GD  IGELNRLGG+KPTNLED FGS                  
Sbjct: 439  SSWNSGLNTSAAFAASSGDL-IGELNRLGGMKPTNLEDIFGSLDPTILPQLQGLSMDAAA 497

Query: 598  -QIQSPIGIQVHQNVNLQPRG-YPSNLSASNVIGSPTFRADPSGAAATVAMNPRYAAFSK 425
             Q+QSP GIQ+ QN+N Q R  YP++LS+S V GS +F  DPSG+A    +N R AAF+K
Sbjct: 498  PQLQSPTGIQMRQNINQQLRSSYPASLSSSPVRGSASFGMDPSGSATAAVLNSRAAAFAK 557

Query: 424  RSQSFIERGVASRNSELPSRATPVAVEASNFSCWGSPDGKLDWAIRGDELNRLRKXXXXX 245
            RSQSFIER  A+R+S   S A+  AV  S  S WGSPDGKLDW I+G+ELN+LRK     
Sbjct: 558  RSQSFIERSAANRHSGFSSSASSAAVVPSPLSDWGSPDGKLDWGIQGEELNKLRKSASFG 617

Query: 244  XXXXXSPL---TMAVPPNDEEPDVSWVHSLVKDAPTAESGQYRVEEQLQCH---NGTDVV 83
                 S       +VP   +EPDVSWV SLVK+AP+A  GQ+  EEQ Q H    G++++
Sbjct: 618  FRSNGSSYAAQAASVPAAADEPDVSWVQSLVKEAPSARPGQFGYEEQHQYHLNSGGSEIL 677

Query: 82   SAMLEQLHMEQEQMVA 35
               +EQL +EQEQMVA
Sbjct: 678  PPWVEQLCVEQEQMVA 693


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