BLASTX nr result

ID: Glycyrrhiza23_contig00018197 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00018197
         (1419 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK46332.1| unknown [Lotus japonicus]                              235   2e-59
ref|XP_002314190.1| predicted protein [Populus trichocarpa] gi|2...   193   1e-46
ref|XP_002299880.1| predicted protein [Populus trichocarpa] gi|2...   187   6e-45
ref|XP_002284037.1| PREDICTED: uncharacterized protein LOC100248...   187   6e-45
emb|CAN69364.1| hypothetical protein VITISV_006045 [Vitis vinifera]   185   3e-44

>gb|AFK46332.1| unknown [Lotus japonicus]
          Length = 245

 Score =  235 bits (600), Expect = 2e-59
 Identities = 143/216 (66%), Positives = 159/216 (73%), Gaps = 12/216 (5%)
 Frame = +3

Query: 492  THTATEIHQ-GNDAKGMKLNGVCWKTPXXXXXXXXXXXXXXIDPENKDHEEPDLELGTG- 665
            THT TE     NDAKG+ LNGVCWK P               +PENK HE PDLELG   
Sbjct: 36   THTETEEEDHSNDAKGL-LNGVCWKAPSTTNSVTVRSS----EPENKSHE-PDLELGKDV 89

Query: 666  ---KAFGEEGVEVELMRLHNLAGPPRFLFTINEETKEDLDSEDGKSRKGSRTRSLSDLMV 836
               K FGEEGVE ELMRLHNLAGPPRFLFTI EE+KEDLDSEDG+SRKGSRTRSLSD+MV
Sbjct: 90   AGLKNFGEEGVECELMRLHNLAGPPRFLFTIKEESKEDLDSEDGRSRKGSRTRSLSDIMV 149

Query: 837  SSIDTPFLN---SSPLKSCLDNSVDSYNKHHHQGFNNPLFESELN---NRYRS-SPPPKF 995
            ++ID+PFLN   SSPLK  LD  +DS+    HQGF NPLFES +    NR+RS SPPPKF
Sbjct: 150  ATIDSPFLNPVASSPLKCSLD-GLDSFK---HQGF-NPLFESSMESELNRFRSNSPPPKF 204

Query: 996  KFLRDAEEKLFRRLMEEAQRKAQMNYGSVVVPESKV 1103
            KFLRDAEEKL+RRL+EEAQRKA+ N GSV   E+KV
Sbjct: 205  KFLRDAEEKLYRRLIEEAQRKAKAN-GSVAESEAKV 239


>ref|XP_002314190.1| predicted protein [Populus trichocarpa] gi|222850598|gb|EEE88145.1|
            predicted protein [Populus trichocarpa]
          Length = 312

 Score =  193 bits (490), Expect = 1e-46
 Identities = 126/227 (55%), Positives = 146/227 (64%), Gaps = 16/227 (7%)
 Frame = +3

Query: 513  HQGNDAKGMKLNGVCWKTPXXXXXXXXXXXXXXIDPENKDHEEPDLELGTGK-----AFG 677
            +  N AKG   + +CWK P               DPE    +EPD ELGT K     AFG
Sbjct: 47   YSSNYAKGF-FHLICWKKPSFFRSNITQDVVR--DPE-APCQEPDQELGTSKDLLIKAFG 102

Query: 678  EEGVEVELMRLHNLAGPPRFLFTINEETKEDLDSEDGK-----SRKGSRTRSLSDLMVSS 842
            EE  E E+MRLHNL GPPRFLFTI EETKEDL+S+D K     SRKGSRT+SLSDLMV +
Sbjct: 103  EESAESEIMRLHNLCGPPRFLFTIKEETKEDLESDDVKSRGDRSRKGSRTKSLSDLMV-T 161

Query: 843  IDTPFLN---SSPLKSCLDNSVDSYNKHHHQGFNNPLFESELN---NRYRSSPPPKFKFL 1004
            IDTPFL+   S  LKS   N +DSY   HH GF NPLFES +    +R RSSPPP+FKFL
Sbjct: 162  IDTPFLSPLASPRLKSPPVNVLDSY---HHHGF-NPLFESSVEAELSRLRSSPPPRFKFL 217

Query: 1005 RDAEEKLFRRLMEEAQRKAQMNYGSVVVPESKVIDSPNSTMVTDNKE 1145
            RDAE KLFRRLMEEA+++A  N   V V +S  I   NSTM+T+  E
Sbjct: 218  RDAEAKLFRRLMEEAEKRASKN--CVSVQDSSEIKVSNSTMITEETE 262


>ref|XP_002299880.1| predicted protein [Populus trichocarpa] gi|222847138|gb|EEE84685.1|
            predicted protein [Populus trichocarpa]
          Length = 313

 Score =  187 bits (475), Expect = 6e-45
 Identities = 116/194 (59%), Positives = 134/194 (69%), Gaps = 17/194 (8%)
 Frame = +3

Query: 615  DPENKDHEEPDLELGTGK-----AFGEEGVEVELMRLHNLAGPPRFLFTINEETKEDLDS 779
            +PE    +EPDLELGT K       GEE VE E+MRLHNL GPPRFLFTI EETKEDL+S
Sbjct: 78   EPEGP-RQEPDLELGTNKDLLIKTLGEESVESEIMRLHNLCGPPRFLFTIKEETKEDLES 136

Query: 780  EDGK-----SRKGSRTRSLSDLMVSSIDTPF----LNSSPLKSCLDNSVDSYNKHHHQGF 932
            +DGK     SR+GSRTRSLSD+MV +IDTP     L S   KS   N  DSY   HH GF
Sbjct: 137  DDGKTRGGRSREGSRTRSLSDIMV-TIDTPSFHTPLASPRFKSPPFNVFDSY---HHHGF 192

Query: 933  NNPLFESELN---NRYRSSPPPKFKFLRDAEEKLFRRLMEEAQRKAQMNYGSVVVPESKV 1103
             NPLFES +    +R RSSPPPKFKFLRDAEEKLFRRL+EEA+R+A  N   V V +   
Sbjct: 193  -NPLFESSVEAELSRLRSSPPPKFKFLRDAEEKLFRRLIEEAERRASKN--CVPVQDLSE 249

Query: 1104 IDSPNSTMVTDNKE 1145
            I  P+STM+T+ +E
Sbjct: 250  IKGPDSTMITEERE 263


>ref|XP_002284037.1| PREDICTED: uncharacterized protein LOC100248455 [Vitis vinifera]
          Length = 319

 Score =  187 bits (475), Expect = 6e-45
 Identities = 125/228 (54%), Positives = 140/228 (61%), Gaps = 30/228 (13%)
 Frame = +3

Query: 555  CWKTPXXXXXXXXXXXXXXIDPENKDHEEPDLELGTGK-----AFGEEGVEVELMRLHNL 719
            CWK P               DP    H+E D ELG+GK     AFGEEGVE ELMRLHNL
Sbjct: 57   CWKRPAPLSSSSTQQLSVR-DPVPNGHDEQDPELGSGKDLLLKAFGEEGVESELMRLHNL 115

Query: 720  AGPPRFLFTINEETKEDLDSEDGK-----SRKGSRTRSLSDLMVSSIDTPFLN---SSPL 875
            AGPPRFLFTI EETKEDL+S+DGK     SR  SRTRSLSD++V +IDTPFL    S PL
Sbjct: 116  AGPPRFLFTIKEETKEDLESDDGKSKGDRSRTASRTRSLSDVLV-AIDTPFLTPLASPPL 174

Query: 876  KSCLDNSVDSYNKHHHQGFNNPLFESELN---NRYRSSPPPKFKFLRDAEEKLFRRLMEE 1046
            KS   N  D Y++H   GF NPLFES      NR RSSPPPKFKFLRDAEEKL+RRLMEE
Sbjct: 175  KSPTFNPFDCYSQH---GF-NPLFESSAESELNRLRSSPPPKFKFLRDAEEKLYRRLMEE 230

Query: 1047 AQR--------------KAQMNYGSVVVPESKVIDSPNSTMVTDNKER 1148
            A++              KA MN  S + PE +   S    +V  NKER
Sbjct: 231  AEKSGIKNGGFVQDSGVKAPMNVISSMTPEER-DGSFIRIIVGKNKER 277


>emb|CAN69364.1| hypothetical protein VITISV_006045 [Vitis vinifera]
          Length = 313

 Score =  185 bits (469), Expect = 3e-44
 Identities = 124/228 (54%), Positives = 140/228 (61%), Gaps = 30/228 (13%)
 Frame = +3

Query: 555  CWKTPXXXXXXXXXXXXXXIDPENKDHEEPDLELGTGK-----AFGEEGVEVELMRLHNL 719
            CWK P               DP    H+E D ELG+GK     AF EEGVE ELMRLHNL
Sbjct: 57   CWKRPAPLSSSSTQQLSVR-DPVPNGHDEQDPELGSGKDLLLKAFEEEGVESELMRLHNL 115

Query: 720  AGPPRFLFTINEETKEDLDSEDGK-----SRKGSRTRSLSDLMVSSIDTPFLN---SSPL 875
            AGPPRFLFTI EETKEDL+S+DGK     SR  SRTRSLSD++V +IDTPFL    S PL
Sbjct: 116  AGPPRFLFTIKEETKEDLESDDGKSKGDRSRTASRTRSLSDVLV-AIDTPFLTPLASPPL 174

Query: 876  KSCLDNSVDSYNKHHHQGFNNPLFESELN---NRYRSSPPPKFKFLRDAEEKLFRRLMEE 1046
            KS   N +D Y++H   GF NPLFES      NR RSSPPPKFKFLRDAEEKL+RRLMEE
Sbjct: 175  KSPTFNPLDCYSQH---GF-NPLFESSAESELNRLRSSPPPKFKFLRDAEEKLYRRLMEE 230

Query: 1047 AQR--------------KAQMNYGSVVVPESKVIDSPNSTMVTDNKER 1148
            A++              KA MN  S + PE +   S    +V  NKER
Sbjct: 231  AEKSGIKNGGFVQDSGVKAPMNVISSMTPEER-DGSFIRIIVGKNKER 277


Top