BLASTX nr result

ID: Glycyrrhiza23_contig00018170 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00018170
         (544 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK37789.1| unknown [Lotus japonicus]                              286   1e-75
ref|XP_002301111.1| predicted protein [Populus trichocarpa] gi|2...   262   3e-68
ref|XP_003603712.1| TRAF-type zinc finger domain-containing prot...   259   1e-67
ref|XP_002527351.1| nucleic acid binding protein, putative [Rici...   256   2e-66
ref|NP_001238526.1| uncharacterized protein LOC100306673 [Glycin...   254   8e-66

>gb|AFK37789.1| unknown [Lotus japonicus]
          Length = 203

 Score =  286 bits (732), Expect = 1e-75
 Identities = 134/171 (78%), Positives = 149/171 (87%), Gaps = 4/171 (2%)
 Frame = -3

Query: 542 RNLEKCNVCGDMVPRQHAEDHYLNTHAPVACSLCSETMERDVLDIHKGEYCPQRVVTCEF 363
           RNLEKC VCGDMVPR+HAEDHYL+THAPV+CSLCSETM+RD+LDIHKGE CPQR+VTCEF
Sbjct: 33  RNLEKCKVCGDMVPRKHAEDHYLSTHAPVSCSLCSETMQRDILDIHKGENCPQRIVTCEF 92

Query: 362 CEFPLPAIDLAEHQEVCGNRTELCHLCNKYVRLRERYSHEARCNGIQDTTVGSSRNV--- 192
           CEFPLPA+DLAEHQEVCGNRTELC+LCNKYVRLRER+SHEARCNG+QD TVGSSR+V   
Sbjct: 93  CEFPLPAVDLAEHQEVCGNRTELCYLCNKYVRLRERFSHEARCNGVQDNTVGSSRDVREA 152

Query: 191 -XXXXXXXXXXXRPQNDFSTKRLLFTMAITGIAVILGSFFLQRKAEPSDMH 42
                         QNDFST+RLL T+AITGIAVILGS FLQ+KAEPSD+H
Sbjct: 153 ERDEGPPRRRPRPQQNDFSTRRLLITIAITGIAVILGSIFLQKKAEPSDVH 203


>ref|XP_002301111.1| predicted protein [Populus trichocarpa] gi|222842837|gb|EEE80384.1|
           predicted protein [Populus trichocarpa]
          Length = 201

 Score =  262 bits (669), Expect = 3e-68
 Identities = 121/171 (70%), Positives = 142/171 (83%), Gaps = 4/171 (2%)
 Frame = -3

Query: 542 RNLEKCNVCGDMVPRQHAEDHYLNTHAPVACSLCSETMERDVLDIHKGEYCPQRVVTCEF 363
           RNL+KC +CGDMVP++HAE+H+LNTHAPVACSLCSETMER++L +HKGE CPQR+VTCEF
Sbjct: 33  RNLKKCKICGDMVPKKHAEEHFLNTHAPVACSLCSETMEREILAVHKGENCPQRIVTCEF 92

Query: 362 CEFPLPAIDLAEHQEVCGNRTELCHLCNKYVRLRERYSHEARCNGIQDTTVGSSRNVXXX 183
           CEFPLPA+DLAEHQEVCGNRTELCH+CNKY+RLRERY+HE+RC G+ DTTV SSR+V   
Sbjct: 93  CEFPLPAVDLAEHQEVCGNRTELCHMCNKYIRLRERYNHESRCTGLPDTTVESSRDV--R 150

Query: 182 XXXXXXXXRPQ----NDFSTKRLLFTMAITGIAVILGSFFLQRKAEPSDMH 42
                    PQ     DFS KRLLFT+AITGIAV+LGSF  Q+K E S +H
Sbjct: 151 AAERRQPQGPQRRQPQDFSRKRLLFTIAITGIAVLLGSFLFQKKTEDSQVH 201


>ref|XP_003603712.1| TRAF-type zinc finger domain-containing protein [Medicago
           truncatula] gi|355492760|gb|AES73963.1| TRAF-type zinc
           finger domain-containing protein [Medicago truncatula]
          Length = 192

 Score =  259 bits (663), Expect = 1e-67
 Identities = 123/167 (73%), Positives = 138/167 (82%)
 Frame = -3

Query: 542 RNLEKCNVCGDMVPRQHAEDHYLNTHAPVACSLCSETMERDVLDIHKGEYCPQRVVTCEF 363
           RNLEKC +CGDMVP+ HA+DHYLNTHAPVACSLCSETMER++L IH+GE CPQR+VTCEF
Sbjct: 33  RNLEKCKLCGDMVPKIHAQDHYLNTHAPVACSLCSETMERNILYIHEGESCPQRIVTCEF 92

Query: 362 CEFPLPAIDLAEHQEVCGNRTELCHLCNKYVRLRERYSHEARCNGIQDTTVGSSRNVXXX 183
           CEFPLPAIDL EHQEVCGNRTE+C LCNKYVRLRERY+HE  CNGIQD   GSSRN    
Sbjct: 93  CEFPLPAIDLPEHQEVCGNRTEMCDLCNKYVRLRERYNHEFNCNGIQDNAAGSSRN---- 148

Query: 182 XXXXXXXXRPQNDFSTKRLLFTMAITGIAVILGSFFLQRKAEPSDMH 42
                   R  N+ S +RL FT+AITGIAVILGS F+QRKAEPS++H
Sbjct: 149 ---ERPAERDANESSKRRLFFTIAITGIAVILGSIFIQRKAEPSNVH 192


>ref|XP_002527351.1| nucleic acid binding protein, putative [Ricinus communis]
           gi|223533270|gb|EEF35023.1| nucleic acid binding
           protein, putative [Ricinus communis]
          Length = 199

 Score =  256 bits (654), Expect = 2e-66
 Identities = 116/167 (69%), Positives = 137/167 (82%)
 Frame = -3

Query: 542 RNLEKCNVCGDMVPRQHAEDHYLNTHAPVACSLCSETMERDVLDIHKGEYCPQRVVTCEF 363
           RNLEKC VCGDM+P++H ++H+ NTHAPVACSLCSETMER+VL IHKGE CPQR+VTCEF
Sbjct: 33  RNLEKCKVCGDMIPKKHYDEHFSNTHAPVACSLCSETMEREVLAIHKGENCPQRIVTCEF 92

Query: 362 CEFPLPAIDLAEHQEVCGNRTELCHLCNKYVRLRERYSHEARCNGIQDTTVGSSRNVXXX 183
           CEFPLPAIDLAEHQEVCGNRTELCHLCN+Y+RLRERY+HE RC G+ +  VG+SR+V   
Sbjct: 93  CEFPLPAIDLAEHQEVCGNRTELCHLCNRYIRLRERYNHEIRCTGVTNNIVGTSRDVRAA 152

Query: 182 XXXXXXXXRPQNDFSTKRLLFTMAITGIAVILGSFFLQRKAEPSDMH 42
                   RP  D+S +RL+FT+AITGIAVILGS   QRK E + +H
Sbjct: 153 ERPQGAPRRPPQDYSRRRLMFTIAITGIAVILGSLLFQRKTENNPVH 199


>ref|NP_001238526.1| uncharacterized protein LOC100306673 [Glycine max]
           gi|255629243|gb|ACU14966.1| unknown [Glycine max]
          Length = 199

 Score =  254 bits (648), Expect = 8e-66
 Identities = 118/166 (71%), Positives = 135/166 (81%)
 Frame = -3

Query: 542 RNLEKCNVCGDMVPRQHAEDHYLNTHAPVACSLCSETMERDVLDIHKGEYCPQRVVTCEF 363
           RNLE+C +C DM+P+  AE+HYLNTHAPVACSLCSETMERD+LDIH+ E CP+R++TCEF
Sbjct: 33  RNLERCQICDDMIPKLLAEEHYLNTHAPVACSLCSETMERDILDIHREENCPKRMITCEF 92

Query: 362 CEFPLPAIDLAEHQEVCGNRTELCHLCNKYVRLRERYSHEARCNGIQDTTVGSSRNVXXX 183
           CEFPLPAIDLAEHQEVCGNRTELCHLCNKYVRLRE Y+HE  CN IQD + GSSR V   
Sbjct: 93  CEFPLPAIDLAEHQEVCGNRTELCHLCNKYVRLRELYNHEDSCNTIQDNSAGSSRYVRPA 152

Query: 182 XXXXXXXXRPQNDFSTKRLLFTMAITGIAVILGSFFLQRKAEPSDM 45
                   RPQNDFS KRL FT+A TGIAV+LGS F QRK + S++
Sbjct: 153 ERDEGARRRPQNDFSGKRLFFTIAFTGIAVVLGSIFFQRKTDLSNV 198