BLASTX nr result

ID: Glycyrrhiza23_contig00018164 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00018164
         (274 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003536531.1| PREDICTED: pentatricopeptide repeat-containi...   133   1e-29
ref|XP_003617141.1| Pentatricopeptide repeat-containing protein ...   133   2e-29
ref|XP_002314694.1| predicted protein [Populus trichocarpa] gi|2...   124   1e-26
emb|CBI26264.3| unnamed protein product [Vitis vinifera]              122   3e-26
ref|XP_002282622.1| PREDICTED: pentatricopeptide repeat-containi...   122   3e-26

>ref|XP_003536531.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g14850-like [Glycine max]
          Length = 686

 Score =  133 bits (335), Expect = 1e-29
 Identities = 61/65 (93%), Positives = 62/65 (95%)
 Frame = -2

Query: 273 IALAFGLIALPHGVPIRITKNLRICGDCHSAIKFISRIVGREIIVRDNNRFHRFKDGWCS 94
           IALAFGLI LP GVPIRITKNLRIC DCHSAIKFIS+IVGREIIVRDNNRFHRFKDGWCS
Sbjct: 622 IALAFGLITLPRGVPIRITKNLRICIDCHSAIKFISKIVGREIIVRDNNRFHRFKDGWCS 681

Query: 93  CKDYW 79
           CKDYW
Sbjct: 682 CKDYW 686


>ref|XP_003617141.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355518476|gb|AET00100.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 684

 Score =  133 bits (334), Expect = 2e-29
 Identities = 62/65 (95%), Positives = 63/65 (96%)
 Frame = -2

Query: 273 IALAFGLIALPHGVPIRITKNLRICGDCHSAIKFISRIVGREIIVRDNNRFHRFKDGWCS 94
           IALAFGLIALP GVPIRITKNLRICGDCHSAIKFISRIVGREIIVRDN+RFHRFKDG CS
Sbjct: 620 IALAFGLIALPQGVPIRITKNLRICGDCHSAIKFISRIVGREIIVRDNHRFHRFKDGCCS 679

Query: 93  CKDYW 79
           CKDYW
Sbjct: 680 CKDYW 684


>ref|XP_002314694.1| predicted protein [Populus trichocarpa] gi|222863734|gb|EEF00865.1|
           predicted protein [Populus trichocarpa]
          Length = 631

 Score =  124 bits (310), Expect = 1e-26
 Identities = 57/65 (87%), Positives = 60/65 (92%)
 Frame = -2

Query: 273 IALAFGLIALPHGVPIRITKNLRICGDCHSAIKFISRIVGREIIVRDNNRFHRFKDGWCS 94
           IALAFGLIALP GVPIRITKNLRICGDCHSA KFIS IVGREIIVRDNNRFHRF+D  CS
Sbjct: 567 IALAFGLIALPPGVPIRITKNLRICGDCHSAFKFISGIVGREIIVRDNNRFHRFRDSQCS 626

Query: 93  CKDYW 79
           C+D+W
Sbjct: 627 CRDFW 631


>emb|CBI26264.3| unnamed protein product [Vitis vinifera]
          Length = 583

 Score =  122 bits (306), Expect = 3e-26
 Identities = 56/65 (86%), Positives = 60/65 (92%)
 Frame = -2

Query: 273 IALAFGLIALPHGVPIRITKNLRICGDCHSAIKFISRIVGREIIVRDNNRFHRFKDGWCS 94
           IALAFGLI++P GVPIRITKNLRICGDCHSAIKFIS IVGREIIVRDNN FHRF+D  CS
Sbjct: 519 IALAFGLISIPAGVPIRITKNLRICGDCHSAIKFISGIVGREIIVRDNNLFHRFRDNQCS 578

Query: 93  CKDYW 79
           C+DYW
Sbjct: 579 CRDYW 583


>ref|XP_002282622.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g14850-like [Vitis vinifera]
          Length = 684

 Score =  122 bits (306), Expect = 3e-26
 Identities = 56/65 (86%), Positives = 60/65 (92%)
 Frame = -2

Query: 273 IALAFGLIALPHGVPIRITKNLRICGDCHSAIKFISRIVGREIIVRDNNRFHRFKDGWCS 94
           IALAFGLI++P GVPIRITKNLRICGDCHSAIKFIS IVGREIIVRDNN FHRF+D  CS
Sbjct: 620 IALAFGLISIPAGVPIRITKNLRICGDCHSAIKFISGIVGREIIVRDNNLFHRFRDNQCS 679

Query: 93  CKDYW 79
           C+DYW
Sbjct: 680 CRDYW 684


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