BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00018098
         (321 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003538536.1| PREDICTED: DNA topoisomerase 3-beta-1-like [...   216   1e-54
ref|XP_002516387.1| prokaryotic DNA topoisomerase, putative [Ric...   186   2e-45
ref|NP_180760.2| DNA topoisomerase III [Arabidopsis thaliana] gi...   183   1e-44
ref|XP_002264970.2| PREDICTED: DNA topoisomerase 3-beta-1-like [...   182   2e-44
ref|XP_002881210.1| DNA topoisomerase family protein [Arabidopsi...   182   2e-44

>ref|XP_003538536.1| PREDICTED: DNA topoisomerase 3-beta-1-like [Glycine max]
          Length = 863

 Score =  216 bits (551), Expect = 1e-54
 Identities = 100/107 (93%), Positives = 105/107 (98%)
 Frame = +1

Query: 1   GHVFSVDFPGKYQDWSATDPLDLFQAQVIKNESNPKAHICRHLNQEARGCRYLVLWLDCD 180
           GHVFSVDFPGKYQDW+ATDPLDLFQAQVIKNESNPKAHICRHL+QEARGCRYLVLWLDCD
Sbjct: 60  GHVFSVDFPGKYQDWAATDPLDLFQAQVIKNESNPKAHICRHLSQEARGCRYLVLWLDCD 119

Query: 181 REGENICFEVIEATGFKINDVYRARFSSVTEKDVLKALDNLVRPNRD 321
           REGENICFEVI++TGF IND YRARFSSVTEKDV+KALDNLVRPNRD
Sbjct: 120 REGENICFEVIKSTGFHINDTYRARFSSVTEKDVVKALDNLVRPNRD 166


>ref|XP_002516387.1| prokaryotic DNA topoisomerase, putative [Ricinus communis]
           gi|223544485|gb|EEF46004.1| prokaryotic DNA
           topoisomerase, putative [Ricinus communis]
          Length = 865

 Score =  186 bits (472), Expect = 2e-45
 Identities = 86/111 (77%), Positives = 97/111 (87%), Gaps = 4/111 (3%)
 Frame = +1

Query: 1   GHVFSVDFPGKYQDWSATDPLDLFQAQVIKNESNPKAHICRHLNQEARGCRYLVLWLDCD 180
           GH+FSVDFP KYQDW+A DP+DLFQA ++K ESNPK HI RHL+QEARGC +LVLWLDCD
Sbjct: 58  GHIFSVDFPQKYQDWTANDPMDLFQAPIVKAESNPKVHIRRHLSQEARGCGHLVLWLDCD 117

Query: 181 REGENICFEVIEATGFKIND----VYRARFSSVTEKDVLKALDNLVRPNRD 321
           REGENICFEVIE TGF +ND    VYRARFSSV EKD+LKA+DNLV+PNRD
Sbjct: 118 REGENICFEVIECTGFHLNDSRRRVYRARFSSVAEKDILKAMDNLVQPNRD 168


>ref|NP_180760.2| DNA topoisomerase III [Arabidopsis thaliana]
           gi|330253525|gb|AEC08619.1| DNA topoisomerase III
           [Arabidopsis thaliana]
          Length = 865

 Score =  183 bits (464), Expect = 1e-44
 Identities = 85/111 (76%), Positives = 94/111 (84%), Gaps = 4/111 (3%)
 Frame = +1

Query: 1   GHVFSVDFPGKYQDWSATDPLDLFQAQVIKNESNPKAHICRHLNQEARGCRYLVLWLDCD 180
           GHVFSVDFP KYQ+W+  DP DLF A +IK ESNPKAHICRHL+ EARGC Y+VLWLDCD
Sbjct: 59  GHVFSVDFPEKYQNWATIDPQDLFDAPIIKKESNPKAHICRHLSNEARGCSYMVLWLDCD 118

Query: 181 REGENICFEVIEATGFKIND----VYRARFSSVTEKDVLKALDNLVRPNRD 321
           REGENICFEVIE+TGF + D    VYRARFSSVTEKD+ KA+DNLV PNRD
Sbjct: 119 REGENICFEVIESTGFDMKDSKRKVYRARFSSVTEKDISKAMDNLVEPNRD 169


>ref|XP_002264970.2| PREDICTED: DNA topoisomerase 3-beta-1-like [Vitis vinifera]
          Length = 894

 Score =  182 bits (462), Expect = 2e-44
 Identities = 86/111 (77%), Positives = 95/111 (85%), Gaps = 4/111 (3%)
 Frame = +1

Query: 1   GHVFSVDFPGKYQDWSATDPLDLFQAQVIKNESNPKAHICRHLNQEARGCRYLVLWLDCD 180
           GHVFSVDFP KYQDW+ TDPLDLFQA ++K ESNPKAHI RHL+QEAR C +LVLWLDCD
Sbjct: 86  GHVFSVDFPAKYQDWTVTDPLDLFQAPILKAESNPKAHIRRHLSQEARDCGHLVLWLDCD 145

Query: 181 REGENICFEVIEATGFKIND----VYRARFSSVTEKDVLKALDNLVRPNRD 321
           REGENICFEV+E TGF  N+    VYRARFSSVTEKD+LKA+DNLV PN D
Sbjct: 146 REGENICFEVVECTGFHGNEARRRVYRARFSSVTEKDILKAMDNLVEPNED 196


>ref|XP_002881210.1| DNA topoisomerase family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297327049|gb|EFH57469.1| DNA topoisomerase family
           protein [Arabidopsis lyrata subsp. lyrata]
          Length = 865

 Score =  182 bits (462), Expect = 2e-44
 Identities = 84/111 (75%), Positives = 94/111 (84%), Gaps = 4/111 (3%)
 Frame = +1

Query: 1   GHVFSVDFPGKYQDWSATDPLDLFQAQVIKNESNPKAHICRHLNQEARGCRYLVLWLDCD 180
           GHVFSVDFP KYQ+W+  DP DLF A ++K ESNPKAHICRHL+ EARGC Y+VLWLDCD
Sbjct: 59  GHVFSVDFPEKYQNWATIDPQDLFDAPILKKESNPKAHICRHLSNEARGCSYMVLWLDCD 118

Query: 181 REGENICFEVIEATGFKIND----VYRARFSSVTEKDVLKALDNLVRPNRD 321
           REGENICFEVIE+TGF + D    VYRARFSSVTEKD+ KA+DNLV PNRD
Sbjct: 119 REGENICFEVIESTGFDMKDSKRKVYRARFSSVTEKDISKAMDNLVEPNRD 169