BLASTX nr result
ID: Glycyrrhiza23_contig00018086
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Glycyrrhiza23_contig00018086 (708 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_001237465.1| uncharacterized protein LOC100306352 [Glycin... 246 3e-63 ref|XP_002271476.1| PREDICTED: U6 snRNA-associated Sm-like prote... 242 6e-62 ref|XP_002532727.1| lsm1, putative [Ricinus communis] gi|2235275... 241 8e-62 ref|XP_002304120.1| predicted protein [Populus trichocarpa] gi|2... 240 2e-61 ref|XP_002331181.1| predicted protein [Populus trichocarpa] gi|1... 239 4e-61 >ref|NP_001237465.1| uncharacterized protein LOC100306352 [Glycine max] gi|255628281|gb|ACU14485.1| unknown [Glycine max] Length = 128 Score = 246 bits (628), Expect = 3e-63 Identities = 124/128 (96%), Positives = 126/128 (98%) Frame = -1 Query: 630 MSWAGPEDIYLSTSLASYLDKKLLVLLRDGRKLMGTLRSFDQFANAVLEGACERVIVGEL 451 MSWAGPEDIYLSTSLASYLDKKLLVLLRDGRKLMGTLRSFDQFANAVLEGACERVIVG+L Sbjct: 1 MSWAGPEDIYLSTSLASYLDKKLLVLLRDGRKLMGTLRSFDQFANAVLEGACERVIVGDL 60 Query: 450 YCDIPLGLYVIRGENVVLIGELDLEREELPPHMTRVATAEIKRAQKAEREASDLKGTMRK 271 YCDIPLGLYVIRGENVVLIGELDLEREELP HMTRV+TAEIKRAQKAEREASDLKGTMRK Sbjct: 61 YCDIPLGLYVIRGENVVLIGELDLEREELPEHMTRVSTAEIKRAQKAEREASDLKGTMRK 120 Query: 270 RMEFLDLD 247 RMEFLD D Sbjct: 121 RMEFLDFD 128 >ref|XP_002271476.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm1 [Vitis vinifera] gi|147803430|emb|CAN62239.1| hypothetical protein VITISV_033727 [Vitis vinifera] gi|297742980|emb|CBI35847.3| unnamed protein product [Vitis vinifera] Length = 128 Score = 242 bits (617), Expect = 6e-62 Identities = 121/128 (94%), Positives = 125/128 (97%) Frame = -1 Query: 630 MSWAGPEDIYLSTSLASYLDKKLLVLLRDGRKLMGTLRSFDQFANAVLEGACERVIVGEL 451 MSWAGPEDIYLSTSLASYLDKKLLVLLRD RKL+G LRSFDQFANAVLEGACERVIVG+L Sbjct: 1 MSWAGPEDIYLSTSLASYLDKKLLVLLRDNRKLLGILRSFDQFANAVLEGACERVIVGDL 60 Query: 450 YCDIPLGLYVIRGENVVLIGELDLEREELPPHMTRVATAEIKRAQKAEREASDLKGTMRK 271 YCDIPLGLYVIRGENVVLIGELDLE+EELPPHMTRV+ AEIKRAQKAEREASDLKGTMRK Sbjct: 61 YCDIPLGLYVIRGENVVLIGELDLEKEELPPHMTRVSAAEIKRAQKAEREASDLKGTMRK 120 Query: 270 RMEFLDLD 247 RMEFLDLD Sbjct: 121 RMEFLDLD 128 >ref|XP_002532727.1| lsm1, putative [Ricinus communis] gi|223527535|gb|EEF29658.1| lsm1, putative [Ricinus communis] Length = 128 Score = 241 bits (616), Expect = 8e-62 Identities = 119/128 (92%), Positives = 126/128 (98%) Frame = -1 Query: 630 MSWAGPEDIYLSTSLASYLDKKLLVLLRDGRKLMGTLRSFDQFANAVLEGACERVIVGEL 451 MSWAGPEDIYLSTSLASYLDKKLLVLLRDGRKLMG LRSFDQFANAVLEGACERVIVG+L Sbjct: 1 MSWAGPEDIYLSTSLASYLDKKLLVLLRDGRKLMGILRSFDQFANAVLEGACERVIVGDL 60 Query: 450 YCDIPLGLYVIRGENVVLIGELDLEREELPPHMTRVATAEIKRAQKAEREASDLKGTMRK 271 YCDIPLGLY+IRGENVVLIGELDLE+EELPPHMTRV+ AEI+RAQKAER+A+DLKGTMRK Sbjct: 61 YCDIPLGLYIIRGENVVLIGELDLEKEELPPHMTRVSAAEIRRAQKAERDATDLKGTMRK 120 Query: 270 RMEFLDLD 247 RMEFLDLD Sbjct: 121 RMEFLDLD 128 >ref|XP_002304120.1| predicted protein [Populus trichocarpa] gi|222841552|gb|EEE79099.1| predicted protein [Populus trichocarpa] Length = 128 Score = 240 bits (612), Expect = 2e-61 Identities = 121/128 (94%), Positives = 124/128 (96%) Frame = -1 Query: 630 MSWAGPEDIYLSTSLASYLDKKLLVLLRDGRKLMGTLRSFDQFANAVLEGACERVIVGEL 451 MSWAGPEDIYLSTSLASYLDKKLLVLLRDGRKLMG LRSFDQFANAVLEGACER IVG+L Sbjct: 1 MSWAGPEDIYLSTSLASYLDKKLLVLLRDGRKLMGILRSFDQFANAVLEGACERAIVGDL 60 Query: 450 YCDIPLGLYVIRGENVVLIGELDLEREELPPHMTRVATAEIKRAQKAEREASDLKGTMRK 271 YCDI LGLYVIRGENVVLIGELDLEREELPPHMTRV+ AEIKRAQKAEREA+DLKGTMRK Sbjct: 61 YCDIHLGLYVIRGENVVLIGELDLEREELPPHMTRVSEAEIKRAQKAEREATDLKGTMRK 120 Query: 270 RMEFLDLD 247 RMEFLDLD Sbjct: 121 RMEFLDLD 128 >ref|XP_002331181.1| predicted protein [Populus trichocarpa] gi|118489961|gb|ABK96777.1| unknown [Populus trichocarpa x Populus deltoides] gi|222873302|gb|EEF10433.1| predicted protein [Populus trichocarpa] Length = 128 Score = 239 bits (610), Expect = 4e-61 Identities = 120/128 (93%), Positives = 125/128 (97%) Frame = -1 Query: 630 MSWAGPEDIYLSTSLASYLDKKLLVLLRDGRKLMGTLRSFDQFANAVLEGACERVIVGEL 451 MSWAGPEDIYLSTSLA+YLDKKLLVLLRDGRKLMG LRSFDQFANAVLEGACERVIVG+L Sbjct: 1 MSWAGPEDIYLSTSLANYLDKKLLVLLRDGRKLMGLLRSFDQFANAVLEGACERVIVGDL 60 Query: 450 YCDIPLGLYVIRGENVVLIGELDLEREELPPHMTRVATAEIKRAQKAEREASDLKGTMRK 271 YCDI LGLYVIRGENVVLIGELDLEREELPPHMTRV+ AEI+RAQKAEREA+DLKGTMRK Sbjct: 61 YCDIHLGLYVIRGENVVLIGELDLEREELPPHMTRVSEAEIRRAQKAEREATDLKGTMRK 120 Query: 270 RMEFLDLD 247 RMEFLDLD Sbjct: 121 RMEFLDLD 128