BLASTX nr result

ID: Glycyrrhiza23_contig00018086 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00018086
         (708 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001237465.1| uncharacterized protein LOC100306352 [Glycin...   246   3e-63
ref|XP_002271476.1| PREDICTED: U6 snRNA-associated Sm-like prote...   242   6e-62
ref|XP_002532727.1| lsm1, putative [Ricinus communis] gi|2235275...   241   8e-62
ref|XP_002304120.1| predicted protein [Populus trichocarpa] gi|2...   240   2e-61
ref|XP_002331181.1| predicted protein [Populus trichocarpa] gi|1...   239   4e-61

>ref|NP_001237465.1| uncharacterized protein LOC100306352 [Glycine max]
           gi|255628281|gb|ACU14485.1| unknown [Glycine max]
          Length = 128

 Score =  246 bits (628), Expect = 3e-63
 Identities = 124/128 (96%), Positives = 126/128 (98%)
 Frame = -1

Query: 630 MSWAGPEDIYLSTSLASYLDKKLLVLLRDGRKLMGTLRSFDQFANAVLEGACERVIVGEL 451
           MSWAGPEDIYLSTSLASYLDKKLLVLLRDGRKLMGTLRSFDQFANAVLEGACERVIVG+L
Sbjct: 1   MSWAGPEDIYLSTSLASYLDKKLLVLLRDGRKLMGTLRSFDQFANAVLEGACERVIVGDL 60

Query: 450 YCDIPLGLYVIRGENVVLIGELDLEREELPPHMTRVATAEIKRAQKAEREASDLKGTMRK 271
           YCDIPLGLYVIRGENVVLIGELDLEREELP HMTRV+TAEIKRAQKAEREASDLKGTMRK
Sbjct: 61  YCDIPLGLYVIRGENVVLIGELDLEREELPEHMTRVSTAEIKRAQKAEREASDLKGTMRK 120

Query: 270 RMEFLDLD 247
           RMEFLD D
Sbjct: 121 RMEFLDFD 128


>ref|XP_002271476.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm1 [Vitis
           vinifera] gi|147803430|emb|CAN62239.1| hypothetical
           protein VITISV_033727 [Vitis vinifera]
           gi|297742980|emb|CBI35847.3| unnamed protein product
           [Vitis vinifera]
          Length = 128

 Score =  242 bits (617), Expect = 6e-62
 Identities = 121/128 (94%), Positives = 125/128 (97%)
 Frame = -1

Query: 630 MSWAGPEDIYLSTSLASYLDKKLLVLLRDGRKLMGTLRSFDQFANAVLEGACERVIVGEL 451
           MSWAGPEDIYLSTSLASYLDKKLLVLLRD RKL+G LRSFDQFANAVLEGACERVIVG+L
Sbjct: 1   MSWAGPEDIYLSTSLASYLDKKLLVLLRDNRKLLGILRSFDQFANAVLEGACERVIVGDL 60

Query: 450 YCDIPLGLYVIRGENVVLIGELDLEREELPPHMTRVATAEIKRAQKAEREASDLKGTMRK 271
           YCDIPLGLYVIRGENVVLIGELDLE+EELPPHMTRV+ AEIKRAQKAEREASDLKGTMRK
Sbjct: 61  YCDIPLGLYVIRGENVVLIGELDLEKEELPPHMTRVSAAEIKRAQKAEREASDLKGTMRK 120

Query: 270 RMEFLDLD 247
           RMEFLDLD
Sbjct: 121 RMEFLDLD 128


>ref|XP_002532727.1| lsm1, putative [Ricinus communis] gi|223527535|gb|EEF29658.1| lsm1,
           putative [Ricinus communis]
          Length = 128

 Score =  241 bits (616), Expect = 8e-62
 Identities = 119/128 (92%), Positives = 126/128 (98%)
 Frame = -1

Query: 630 MSWAGPEDIYLSTSLASYLDKKLLVLLRDGRKLMGTLRSFDQFANAVLEGACERVIVGEL 451
           MSWAGPEDIYLSTSLASYLDKKLLVLLRDGRKLMG LRSFDQFANAVLEGACERVIVG+L
Sbjct: 1   MSWAGPEDIYLSTSLASYLDKKLLVLLRDGRKLMGILRSFDQFANAVLEGACERVIVGDL 60

Query: 450 YCDIPLGLYVIRGENVVLIGELDLEREELPPHMTRVATAEIKRAQKAEREASDLKGTMRK 271
           YCDIPLGLY+IRGENVVLIGELDLE+EELPPHMTRV+ AEI+RAQKAER+A+DLKGTMRK
Sbjct: 61  YCDIPLGLYIIRGENVVLIGELDLEKEELPPHMTRVSAAEIRRAQKAERDATDLKGTMRK 120

Query: 270 RMEFLDLD 247
           RMEFLDLD
Sbjct: 121 RMEFLDLD 128


>ref|XP_002304120.1| predicted protein [Populus trichocarpa] gi|222841552|gb|EEE79099.1|
           predicted protein [Populus trichocarpa]
          Length = 128

 Score =  240 bits (612), Expect = 2e-61
 Identities = 121/128 (94%), Positives = 124/128 (96%)
 Frame = -1

Query: 630 MSWAGPEDIYLSTSLASYLDKKLLVLLRDGRKLMGTLRSFDQFANAVLEGACERVIVGEL 451
           MSWAGPEDIYLSTSLASYLDKKLLVLLRDGRKLMG LRSFDQFANAVLEGACER IVG+L
Sbjct: 1   MSWAGPEDIYLSTSLASYLDKKLLVLLRDGRKLMGILRSFDQFANAVLEGACERAIVGDL 60

Query: 450 YCDIPLGLYVIRGENVVLIGELDLEREELPPHMTRVATAEIKRAQKAEREASDLKGTMRK 271
           YCDI LGLYVIRGENVVLIGELDLEREELPPHMTRV+ AEIKRAQKAEREA+DLKGTMRK
Sbjct: 61  YCDIHLGLYVIRGENVVLIGELDLEREELPPHMTRVSEAEIKRAQKAEREATDLKGTMRK 120

Query: 270 RMEFLDLD 247
           RMEFLDLD
Sbjct: 121 RMEFLDLD 128


>ref|XP_002331181.1| predicted protein [Populus trichocarpa] gi|118489961|gb|ABK96777.1|
           unknown [Populus trichocarpa x Populus deltoides]
           gi|222873302|gb|EEF10433.1| predicted protein [Populus
           trichocarpa]
          Length = 128

 Score =  239 bits (610), Expect = 4e-61
 Identities = 120/128 (93%), Positives = 125/128 (97%)
 Frame = -1

Query: 630 MSWAGPEDIYLSTSLASYLDKKLLVLLRDGRKLMGTLRSFDQFANAVLEGACERVIVGEL 451
           MSWAGPEDIYLSTSLA+YLDKKLLVLLRDGRKLMG LRSFDQFANAVLEGACERVIVG+L
Sbjct: 1   MSWAGPEDIYLSTSLANYLDKKLLVLLRDGRKLMGLLRSFDQFANAVLEGACERVIVGDL 60

Query: 450 YCDIPLGLYVIRGENVVLIGELDLEREELPPHMTRVATAEIKRAQKAEREASDLKGTMRK 271
           YCDI LGLYVIRGENVVLIGELDLEREELPPHMTRV+ AEI+RAQKAEREA+DLKGTMRK
Sbjct: 61  YCDIHLGLYVIRGENVVLIGELDLEREELPPHMTRVSEAEIRRAQKAEREATDLKGTMRK 120

Query: 270 RMEFLDLD 247
           RMEFLDLD
Sbjct: 121 RMEFLDLD 128


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