BLASTX nr result

ID: Glycyrrhiza23_contig00018045 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00018045
         (553 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001236714.1| uncharacterized protein LOC100500350 [Glycin...    74   4e-20
ref|XP_003609511.1| hypothetical protein MTR_4g116480 [Medicago ...    81   6e-18
ref|NP_001238250.1| uncharacterized protein LOC100527583 [Glycin...    79   8e-16
emb|CBI25596.3| unnamed protein product [Vitis vinifera]               82   6e-14
ref|XP_002266038.1| PREDICTED: E3 ubiquitin-protein ligase arkad...    82   6e-14

>ref|NP_001236714.1| uncharacterized protein LOC100500350 [Glycine max]
           gi|255630097|gb|ACU15402.1| unknown [Glycine max]
          Length = 100

 Score = 73.6 bits (179), Expect(2) = 4e-20
 Identities = 44/83 (53%), Positives = 50/83 (60%)
 Frame = +2

Query: 74  MLPGVECARRRRLHQXXXXXXXXXCCHDSSTRRSMFCLYTTNAQSILTQPLSSLQKAGVV 253
           MLPGVECARRRRLH             D ST    FCLYTT       Q  SSL +  ++
Sbjct: 4   MLPGVECARRRRLHNSAG---------DDSTSNRSFCLYTTRN----LQSSSSLLERSML 50

Query: 254 NQQAYPDEKMGGEAREAKRRLDE 322
           N+ AYPDE +GG AREAKRRLD+
Sbjct: 51  NR-AYPDENLGGAAREAKRRLDQ 72



 Score = 49.7 bits (117), Expect(2) = 4e-20
 Identities = 24/36 (66%), Positives = 29/36 (80%)
 Frame = +3

Query: 321 RRRLDEKFAAHMKSENQRFNHKRKSLFLGLWQQLRS 428
           +RRLD+KF AH+KSE+    HKRK LF GLW+QLRS
Sbjct: 67  KRRLDQKFMAHIKSES----HKRKGLFHGLWRQLRS 98


>ref|XP_003609511.1| hypothetical protein MTR_4g116480 [Medicago truncatula]
           gi|217075438|gb|ACJ86079.1| unknown [Medicago
           truncatula] gi|355510566|gb|AES91708.1| hypothetical
           protein MTR_4g116480 [Medicago truncatula]
           gi|388505550|gb|AFK40841.1| unknown [Medicago
           truncatula]
          Length = 96

 Score = 80.9 bits (198), Expect(2) = 6e-18
 Identities = 46/83 (55%), Positives = 55/83 (66%)
 Frame = +2

Query: 74  MLPGVECARRRRLHQXXXXXXXXXCCHDSSTRRSMFCLYTTNAQSILTQPLSSLQKAGVV 253
           MLPGVECARRRRL++              ST+RS FCLYT N +S  + P S L++    
Sbjct: 1   MLPGVECARRRRLYKSKV--------ESDSTKRS-FCLYTRNLKSTTSSPTSFLRQ---- 47

Query: 254 NQQAYPDEKMGGEAREAKRRLDE 322
           NQ +YPDEK+GG AREAKRRLDE
Sbjct: 48  NQYSYPDEKLGGSAREAKRRLDE 70



 Score = 35.0 bits (79), Expect(2) = 6e-18
 Identities = 18/27 (66%), Positives = 21/27 (77%)
 Frame = +3

Query: 321 RRRLDEKFAAHMKSENQRFNHKRKSLF 401
           +RRLDEKF A MKSEN +   +RKSLF
Sbjct: 65  KRRLDEKFTASMKSENYK---RRKSLF 88


>ref|NP_001238250.1| uncharacterized protein LOC100527583 [Glycine max]
           gi|255632685|gb|ACU16694.1| unknown [Glycine max]
          Length = 202

 Score = 79.0 bits (193), Expect(2) = 8e-16
 Identities = 49/102 (48%), Positives = 64/102 (62%)
 Frame = +2

Query: 17  IICHLTIN*VSTECE*RREMLPGVECARRRRLHQXXXXXXXXXCCHDSSTRRSMFCLYTT 196
           I+C L ++  +T       MLPGVECARRRRLH+           H +STRRS FCLYT+
Sbjct: 3   IVCELLVHDQNTMAG----MLPGVECARRRRLHRCLDSNSTSLTSH-ASTRRSSFCLYTS 57

Query: 197 NAQSILTQPLSSLQKAGVVNQQAYPDEKMGGEAREAKRRLDE 322
           N +  L+   SSLQ++  +  Q +PDE MGG  REAK+RLD+
Sbjct: 58  NHECRLSLS-SSLQRS--MLYQPHPDENMGGVVREAKQRLDD 96



 Score = 29.6 bits (65), Expect(2) = 8e-16
 Identities = 12/20 (60%), Positives = 16/20 (80%)
 Frame = +3

Query: 321 RRRLDEKFAAHMKSENQRFN 380
           ++RLD+KF AH  SEN+R N
Sbjct: 91  KQRLDDKFRAHRNSENKRQN 110


>emb|CBI25596.3| unnamed protein product [Vitis vinifera]
          Length = 118

 Score = 82.0 bits (201), Expect = 6e-14
 Identities = 45/83 (54%), Positives = 52/83 (62%)
 Frame = +2

Query: 74  MLPGVECARRRRLHQXXXXXXXXXCCHDSSTRRSMFCLYTTNAQSILTQPLSSLQKAGVV 253
           MLPGVECARRRR HQ               TRRS FCLYT+N ++      SS+Q++  V
Sbjct: 4   MLPGVECARRRRFHQSGGCSDSPTVAVHGCTRRSSFCLYTSNHENHHATSSSSMQRS--V 61

Query: 254 NQQAYPDEKMGGEAREAKRRLDE 322
             QAY DEK+GG AREAK RLDE
Sbjct: 62  LNQAYSDEKLGGVAREAKERLDE 84


>ref|XP_002266038.1| PREDICTED: E3 ubiquitin-protein ligase arkadia-like isoform 1
           [Vitis vinifera]
          Length = 193

 Score = 82.0 bits (201), Expect = 6e-14
 Identities = 45/83 (54%), Positives = 52/83 (62%)
 Frame = +2

Query: 74  MLPGVECARRRRLHQXXXXXXXXXCCHDSSTRRSMFCLYTTNAQSILTQPLSSLQKAGVV 253
           MLPGVECARRRR HQ               TRRS FCLYT+N ++      SS+Q++  V
Sbjct: 4   MLPGVECARRRRFHQSGGCSDSPTVAVHGCTRRSSFCLYTSNHENHHATSSSSMQRS--V 61

Query: 254 NQQAYPDEKMGGEAREAKRRLDE 322
             QAY DEK+GG AREAK RLDE
Sbjct: 62  LNQAYSDEKLGGVAREAKERLDE 84


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