BLASTX nr result

ID: Glycyrrhiza23_contig00018029 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00018029
         (769 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003516776.1| PREDICTED: uncharacterized protein LOC100780...   287   2e-75
ref|XP_002515845.1| gamma-tubulin complex component, putative [R...   236   3e-60
ref|XP_004157214.1| PREDICTED: uncharacterized protein LOC101229...   236   5e-60
ref|XP_004140827.1| PREDICTED: uncharacterized protein LOC101209...   236   5e-60
ref|XP_003636002.1| Gamma-tubulin complex component [Medicago tr...   233   4e-59

>ref|XP_003516776.1| PREDICTED: uncharacterized protein LOC100780017 [Glycine max]
          Length = 1179

 Score =  287 bits (734), Expect = 2e-75
 Identities = 157/249 (63%), Positives = 180/249 (72%)
 Frame = -3

Query: 749 MMEWAMGASLLESLKVEDPWVLPNTWESIPCEXXXXXXXXXXXXXXXXSNQTLATLSESS 570
           M +    + LLE+LK++DPW+ P+TWESIP E                 +  L+TLSESS
Sbjct: 1   MADTKFASLLLENLKLQDPWLPPDTWESIPSESGLLLSSPIPNSNQPLCH--LSTLSESS 58

Query: 569 LVRLVMNAMQGVKSSLISIQKLSAIFCSDPADRTFLRIRNLWNRASSTHSLGNILTSIGC 390
           LVRL +NAMQG KSSL+ IQ LSAIF SDP+ R+FL     WNRAS+T SLGNIL SIGC
Sbjct: 59  LVRLAVNAMQGAKSSLVIIQNLSAIFSSDPSVRSFL-----WNRASTTRSLGNILISIGC 113

Query: 389 TGSLVFLLREFVDYFTNTNVDRSFGQNXXXXXXXXXXXXXXPYSLVNQAFAVAVGKVLEG 210
           TGSL+FLLR FVDYFT+T                       P++LVNQAFAV+VGKVLEG
Sbjct: 114 TGSLLFLLRAFVDYFTDT--------------FPLIHHDSPPFTLVNQAFAVSVGKVLEG 159

Query: 209 YICGLDTIHASVVLRRSLKDVDLSVSGCLKSVVHSEITLLEFYLHTKELRTQIEALASIC 30
           YICGLDTIH SV+LRRS KDVD +V GCLK+VVHSEITLLEFYLHTKELRTQIEALAS+C
Sbjct: 160 YICGLDTIHTSVLLRRSSKDVDFTVPGCLKNVVHSEITLLEFYLHTKELRTQIEALASVC 219

Query: 29  NLQKWDHCF 3
           NLQKW HCF
Sbjct: 220 NLQKWVHCF 228


>ref|XP_002515845.1| gamma-tubulin complex component, putative [Ricinus communis]
           gi|223545000|gb|EEF46514.1| gamma-tubulin complex
           component, putative [Ricinus communis]
          Length = 1209

 Score =  236 bits (603), Expect = 3e-60
 Identities = 132/242 (54%), Positives = 163/242 (67%), Gaps = 1/242 (0%)
 Frame = -3

Query: 725 SLLESLKVEDPWVLPNTWESIPCEXXXXXXXXXXXXXXXXSNQTLATLSESSLVRLVMNA 546
           +LLE LKVE+PW+ P TWESIP +                   T ++LSE+SLVRL +NA
Sbjct: 9   TLLEKLKVEEPWLPPVTWESIPSQNVSSFRPPPNSSPL---KHTSSSLSEASLVRLALNA 65

Query: 545 MQGVKSSLISIQKLSAIFCSDPADRTFLRIRNLWNRASSTHSLGNILTSIGCTGSLVFLL 366
           MQGV+S+L SIQKLS+ F SDPADR+  +I +LWNR+SSTH+LG IL SIGC GSLVFLL
Sbjct: 66  MQGVESALTSIQKLSSAFSSDPADRSHHQIPSLWNRSSSTHALGRILNSIGCFGSLVFLL 125

Query: 365 REFVDYFTNTNVDRSFGQNXXXXXXXXXXXXXXPYSLVNQAFAVAVGKVLEGYICGLDTI 186
           R+FVD  T+  +++                    Y+LVNQAFAVAVGKVLEGY+C L+T+
Sbjct: 126 RKFVDNLTHIELEQ------IHYDHDTQKEQHLSYTLVNQAFAVAVGKVLEGYVCALNTV 179

Query: 185 HASVVLRR-SLKDVDLSVSGCLKSVVHSEITLLEFYLHTKELRTQIEALASICNLQKWDH 9
           +AS  LR  S  DV+     CL S+VHS++TLLE YLHTKELR QIEAL +ICNL     
Sbjct: 180 YASARLRHSSTVDVEYYEEACLTSIVHSKVTLLELYLHTKELRCQIEALGNICNLYDVAL 239

Query: 8   CF 3
           CF
Sbjct: 240 CF 241


>ref|XP_004157214.1| PREDICTED: uncharacterized protein LOC101229894 [Cucumis sativus]
          Length = 1113

 Score =  236 bits (601), Expect = 5e-60
 Identities = 129/255 (50%), Positives = 163/255 (63%), Gaps = 14/255 (5%)
 Frame = -3

Query: 725 SLLESLKVEDPWVLPNTWESIPCEXXXXXXXXXXXXXXXXSNQTLATLSESSLVRLVMNA 546
           SL ESLK+E PW+ P TWES P +                   + +++SE+SLVRL MNA
Sbjct: 11  SLFESLKMEGPWLPPKTWESFPLQSQQTQLPSRCSAAI-----SSSSVSEASLVRLAMNA 65

Query: 545 MQGVKSSLISIQKLSAIFCSDPADRTFLRIRNLWNRASSTHSLGNILTSIGCTGSLVFLL 366
           +QG++S+LIS++ +SA FCSDP+DRTF +I +LWNR+SSTH LG IL S GC G LVFLL
Sbjct: 66  LQGLESALISVENVSAAFCSDPSDRTFHQIPSLWNRSSSTHVLGKILRSFGCVGFLVFLL 125

Query: 365 REFVDYFTNTNVDRSFGQN---------XXXXXXXXXXXXXXPYSLVNQAFAVAVGKVLE 213
            +FV +FT   +D +F Q                          SLVNQAFAVA+ K+LE
Sbjct: 126 HKFVGHFTEMGIDETFNQMSYQSKLEQCKSNDDSKVIERQRSQKSLVNQAFAVALKKILE 185

Query: 212 GYICGLDTIHASVVLRRSLK-----DVDLSVSGCLKSVVHSEITLLEFYLHTKELRTQIE 48
           GY C LD++HASV LRR+ K      ++ SV GCL SVVHSE+TLLE YLHT+ELR QIE
Sbjct: 186 GYTCALDSLHASVGLRRTSKVPDAPFIESSVEGCLMSVVHSEVTLLEMYLHTRELRNQIE 245

Query: 47  ALASICNLQKWDHCF 3
            L +ICNL    +CF
Sbjct: 246 VLGNICNLHNIANCF 260


>ref|XP_004140827.1| PREDICTED: uncharacterized protein LOC101209612 [Cucumis sativus]
          Length = 1147

 Score =  236 bits (601), Expect = 5e-60
 Identities = 129/255 (50%), Positives = 163/255 (63%), Gaps = 14/255 (5%)
 Frame = -3

Query: 725 SLLESLKVEDPWVLPNTWESIPCEXXXXXXXXXXXXXXXXSNQTLATLSESSLVRLVMNA 546
           SL ESLK+E PW+ P TWES P +                   + +++SE+SLVRL MNA
Sbjct: 11  SLFESLKMEGPWLPPKTWESFPLQSQQTQLPSRCSAAI-----SSSSVSEASLVRLAMNA 65

Query: 545 MQGVKSSLISIQKLSAIFCSDPADRTFLRIRNLWNRASSTHSLGNILTSIGCTGSLVFLL 366
           +QG++S+LIS++ +SA FCSDP+DRTF +I +LWNR+SSTH LG IL S GC G LVFLL
Sbjct: 66  LQGLESALISVENVSAAFCSDPSDRTFHQIPSLWNRSSSTHVLGKILRSFGCVGFLVFLL 125

Query: 365 REFVDYFTNTNVDRSFGQN---------XXXXXXXXXXXXXXPYSLVNQAFAVAVGKVLE 213
            +FV +FT   +D +F Q                          SLVNQAFAVA+ K+LE
Sbjct: 126 HKFVGHFTEMGIDETFNQMSYQSKLEQCKSNDDSKVIERQRSQKSLVNQAFAVALKKILE 185

Query: 212 GYICGLDTIHASVVLRRSLK-----DVDLSVSGCLKSVVHSEITLLEFYLHTKELRTQIE 48
           GY C LD++HASV LRR+ K      ++ SV GCL SVVHSE+TLLE YLHT+ELR QIE
Sbjct: 186 GYTCALDSLHASVGLRRTSKVPDAPFIESSVEGCLMSVVHSEVTLLEMYLHTRELRNQIE 245

Query: 47  ALASICNLQKWDHCF 3
            L +ICNL    +CF
Sbjct: 246 VLGNICNLHNIANCF 260


>ref|XP_003636002.1| Gamma-tubulin complex component [Medicago truncatula]
           gi|355501937|gb|AES83140.1| Gamma-tubulin complex
           component [Medicago truncatula]
          Length = 1206

 Score =  233 bits (593), Expect = 4e-59
 Identities = 139/248 (56%), Positives = 157/248 (63%), Gaps = 1/248 (0%)
 Frame = -3

Query: 746 MEWAMGASLLESLKVEDPWVLPNTWESIPCEXXXXXXXXXXXXXXXXSNQTLATLSESSL 567
           MEW M ASLL++LK+ DPW+ PNTWE                     SNQT  TLSESSL
Sbjct: 1   MEWEMSASLLQNLKLHDPWLPPNTWEQRTPTPLLPLQLSSNSNSNSNSNQT--TLSESSL 58

Query: 566 VRLVMNAMQGVKSSLISIQKLSAIFCSDPADRTFLRIRNLWNRASSTHSLGNILTSIGCT 387
           VRLVMNAM G KSS+I+I  LS IF S   + TFL   +LW RAS+THS  NIL SI  T
Sbjct: 59  VRLVMNAMLGSKSSIIAIHNLSPIFSSHHPNTTFL---HLWYRASTTHSFSNILQSIAST 115

Query: 386 GSLVFLLREFVDYFTNTNVDRSFGQNXXXXXXXXXXXXXXPYSLVNQAFAVAVGKVLEGY 207
            SLVFLLR FVD+FT                         P +LVNQAFAVAVGKVLEGY
Sbjct: 116 ASLVFLLRHFVDHFT---------------------ISLPPCTLVNQAFAVAVGKVLEGY 154

Query: 206 ICGLDTIHASVVLRRSLK-DVDLSVSGCLKSVVHSEITLLEFYLHTKELRTQIEALASIC 30
           I  LDTIH+S++ RR+ +  VD S S C  SV HSEITLLE YLHTK+LR  I+ALASIC
Sbjct: 155 ISSLDTIHSSLIFRRASEIPVDFSASSCFNSVSHSEITLLELYLHTKQLRIHIQALASIC 214

Query: 29  NLQKWDHC 6
           NL KW HC
Sbjct: 215 NLLKWAHC 222


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