BLASTX nr result

ID: Glycyrrhiza23_contig00017976 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00017976
         (807 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003525399.1| PREDICTED: tubulin beta-1 chain-like [Glycin...   298   9e-79
gb|AFK38048.1| unknown [Lotus japonicus]                              297   2e-78
sp|P12459.1|TBB1_SOYBN RecName: Full=Tubulin beta-1 chain; AltNa...   296   5e-78
ref|XP_003532738.1| PREDICTED: tubulin beta-1 chain-like [Glycin...   296   5e-78
ref|XP_002509801.1| tubulin beta chain, putative [Ricinus commun...   293   2e-77

>ref|XP_003525399.1| PREDICTED: tubulin beta-1 chain-like [Glycine max]
          Length = 446

 Score =  298 bits (763), Expect = 9e-79
 Identities = 138/141 (97%), Positives = 141/141 (100%)
 Frame = -2

Query: 425 MREILHVQAGQCGNQIGGKFWEVMCDEHGIDATGSYVGNSHLQIERVNVYYNEASGGRYV 246
           MREILHVQAGQCGNQIGGKFWEVMCDEHGIDATG+YVGNSHLQ+ERVNVYYNEASGGRYV
Sbjct: 1   MREILHVQAGQCGNQIGGKFWEVMCDEHGIDATGNYVGNSHLQLERVNVYYNEASGGRYV 60

Query: 245 PRAVLMDLEPGTMDSLRSGPYGKIFRPDNFVFGQNGAGNNWAKGHYTEGAELIDSVLDVV 66
           PRAVLMDLEPGTMDSLRSGP+GKIFRPDNFVFGQNGAGNNWAKGHYTEGAELIDSVLDVV
Sbjct: 61  PRAVLMDLEPGTMDSLRSGPFGKIFRPDNFVFGQNGAGNNWAKGHYTEGAELIDSVLDVV 120

Query: 65  RKEAENCDCLQGFQICHSLGG 3
           RKEAENCDCLQGFQICHSLGG
Sbjct: 121 RKEAENCDCLQGFQICHSLGG 141


>gb|AFK38048.1| unknown [Lotus japonicus]
          Length = 378

 Score =  297 bits (761), Expect = 2e-78
 Identities = 138/141 (97%), Positives = 140/141 (99%)
 Frame = -2

Query: 425 MREILHVQAGQCGNQIGGKFWEVMCDEHGIDATGSYVGNSHLQIERVNVYYNEASGGRYV 246
           MREILHVQAGQCGNQIGGKFWEVMCDEHGID +GSYVGNSHLQ+ERVNVYYNEASGGRYV
Sbjct: 1   MREILHVQAGQCGNQIGGKFWEVMCDEHGIDQSGSYVGNSHLQLERVNVYYNEASGGRYV 60

Query: 245 PRAVLMDLEPGTMDSLRSGPYGKIFRPDNFVFGQNGAGNNWAKGHYTEGAELIDSVLDVV 66
           PRAVLMDLEPGTMDSLRSGPYGKIFRPDNFVFGQNGAGNNWAKGHYTEGAELIDSVLDVV
Sbjct: 61  PRAVLMDLEPGTMDSLRSGPYGKIFRPDNFVFGQNGAGNNWAKGHYTEGAELIDSVLDVV 120

Query: 65  RKEAENCDCLQGFQICHSLGG 3
           RKEAENCDCLQGFQICHSLGG
Sbjct: 121 RKEAENCDCLQGFQICHSLGG 141


>sp|P12459.1|TBB1_SOYBN RecName: Full=Tubulin beta-1 chain; AltName: Full=Beta-1-tubulin
           gi|170060|gb|AAA34009.1| S-beta-1 tubulin [Glycine max]
          Length = 445

 Score =  296 bits (757), Expect = 5e-78
 Identities = 137/141 (97%), Positives = 140/141 (99%)
 Frame = -2

Query: 425 MREILHVQAGQCGNQIGGKFWEVMCDEHGIDATGSYVGNSHLQIERVNVYYNEASGGRYV 246
           MREILHVQAGQCGNQIGGKFWEVMCDEHGIDATG+YVGN HLQ+ERVNVYYNEASGGRYV
Sbjct: 1   MREILHVQAGQCGNQIGGKFWEVMCDEHGIDATGNYVGNFHLQLERVNVYYNEASGGRYV 60

Query: 245 PRAVLMDLEPGTMDSLRSGPYGKIFRPDNFVFGQNGAGNNWAKGHYTEGAELIDSVLDVV 66
           PRAVLMDLEPGTMDSLRSGP+GKIFRPDNFVFGQNGAGNNWAKGHYTEGAELIDSVLDVV
Sbjct: 61  PRAVLMDLEPGTMDSLRSGPFGKIFRPDNFVFGQNGAGNNWAKGHYTEGAELIDSVLDVV 120

Query: 65  RKEAENCDCLQGFQICHSLGG 3
           RKEAENCDCLQGFQICHSLGG
Sbjct: 121 RKEAENCDCLQGFQICHSLGG 141


>ref|XP_003532738.1| PREDICTED: tubulin beta-1 chain-like [Glycine max]
          Length = 445

 Score =  296 bits (757), Expect = 5e-78
 Identities = 137/141 (97%), Positives = 140/141 (99%)
 Frame = -2

Query: 425 MREILHVQAGQCGNQIGGKFWEVMCDEHGIDATGSYVGNSHLQIERVNVYYNEASGGRYV 246
           MREILHVQAGQCGNQIGGKFWEVMCDEHGIDATG+YVGN HLQ+ERVNVYYNEASGGRYV
Sbjct: 1   MREILHVQAGQCGNQIGGKFWEVMCDEHGIDATGNYVGNFHLQLERVNVYYNEASGGRYV 60

Query: 245 PRAVLMDLEPGTMDSLRSGPYGKIFRPDNFVFGQNGAGNNWAKGHYTEGAELIDSVLDVV 66
           PRAVLMDLEPGTMDSLRSGP+GKIFRPDNFVFGQNGAGNNWAKGHYTEGAELIDSVLDVV
Sbjct: 61  PRAVLMDLEPGTMDSLRSGPFGKIFRPDNFVFGQNGAGNNWAKGHYTEGAELIDSVLDVV 120

Query: 65  RKEAENCDCLQGFQICHSLGG 3
           RKEAENCDCLQGFQICHSLGG
Sbjct: 121 RKEAENCDCLQGFQICHSLGG 141


>ref|XP_002509801.1| tubulin beta chain, putative [Ricinus communis]
           gi|223549700|gb|EEF51188.1| tubulin beta chain, putative
           [Ricinus communis]
          Length = 445

 Score =  293 bits (751), Expect = 2e-77
 Identities = 134/141 (95%), Positives = 140/141 (99%)
 Frame = -2

Query: 425 MREILHVQAGQCGNQIGGKFWEVMCDEHGIDATGSYVGNSHLQIERVNVYYNEASGGRYV 246
           MREILH+QAGQCGNQIGGKFWEV+CDEHGID TG+YVGNSH+Q+ERVNVYYNEASGGRYV
Sbjct: 1   MREILHIQAGQCGNQIGGKFWEVVCDEHGIDPTGNYVGNSHVQLERVNVYYNEASGGRYV 60

Query: 245 PRAVLMDLEPGTMDSLRSGPYGKIFRPDNFVFGQNGAGNNWAKGHYTEGAELIDSVLDVV 66
           PRAVLMDLEPGTMDSLR+GPYGKIFRPDNFVFGQNGAGNNWAKGHYTEGAELIDSVLDVV
Sbjct: 61  PRAVLMDLEPGTMDSLRTGPYGKIFRPDNFVFGQNGAGNNWAKGHYTEGAELIDSVLDVV 120

Query: 65  RKEAENCDCLQGFQICHSLGG 3
           RKEAENCDCLQGFQICHSLGG
Sbjct: 121 RKEAENCDCLQGFQICHSLGG 141


Top