BLASTX nr result

ID: Glycyrrhiza23_contig00017962 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00017962
         (1113 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003625502.1| Nuclear pore complex protein Nup205 [Medicag...   552   e-155
gb|ABD32200.2| hypothetical protein MtrDRAFT_AC148343g24v2 [Medi...   552   e-155
ref|XP_003525930.1| PREDICTED: nuclear pore complex protein Nup2...   551   e-154
emb|CBI28192.3| unnamed protein product [Vitis vinifera]              459   e-127
ref|XP_003633105.1| PREDICTED: nuclear pore complex protein Nup2...   457   e-126

>ref|XP_003625502.1| Nuclear pore complex protein Nup205 [Medicago truncatula]
            gi|355500517|gb|AES81720.1| Nuclear pore complex protein
            Nup205 [Medicago truncatula]
          Length = 2047

 Score =  552 bits (1422), Expect = e-155
 Identities = 288/362 (79%), Positives = 316/362 (87%)
 Frame = -2

Query: 1112 NLQGGLRWIDTKLRRDMAVDVDRQRMIINPVLRLVFSLTSLVDTSDFMEVKNKVVRELID 933
            N QGGLRW + +LRRDMAVDVDRQ+MII PVLRLV+SLTSLVDTSD+MEVKNK+VRE+ID
Sbjct: 1686 NSQGGLRWAEKRLRRDMAVDVDRQQMIITPVLRLVYSLTSLVDTSDYMEVKNKIVREVID 1745

Query: 932  FVKGHQSLFDQVLRLDIAEADELKMEQINLVVGILSKVWPYEESDEYGFVQGLFGMMRAL 753
            FVKGHQSLF QVLRL+IAEADEL+MEQINLVVGILSKVWPYEESDEYGFVQGLFG+M  L
Sbjct: 1746 FVKGHQSLFAQVLRLEIAEADELRMEQINLVVGILSKVWPYEESDEYGFVQGLFGLMNVL 1805

Query: 752  FSRDSNLKVPGFAQSRVSPENQRNSELQIFNLCXXXXXXXXXLVTKKXXXXXXXXXXXSY 573
            FSRDSN KV GF +SRVSPENQR+SELQIF LC         LVTKK           SY
Sbjct: 1806 FSRDSNSKVLGFPRSRVSPENQRSSELQIFKLCFSLSSYLYFLVTKKSLRLQSSDASSSY 1865

Query: 572  PTSIELQQPTLILLNSLLTSVTTALERAAEEKSLLLNKIRDINELSRQEVDEIISMCVRQ 393
            PTS+E QQP+L LLNSLL+S TTALERAAEEKSLLLNKIRDINEL+RQEVDEIISMCVRQ
Sbjct: 1866 PTSVEFQQPSLSLLNSLLSSATTALERAAEEKSLLLNKIRDINELARQEVDEIISMCVRQ 1925

Query: 392  DSVSSSDNIHKRRYIAMVEMCRVVACRDQLIILLLPLSEHVLNIILIHLQESSVALDSTM 213
            +S SSSDNI +RRYIAMVEMCRVV+C DQLI+LLLPLSEHVLNIIL+HLQ+ S A +STM
Sbjct: 1926 ESASSSDNIQRRRYIAMVEMCRVVSCTDQLIVLLLPLSEHVLNIILVHLQDCSDAFESTM 1985

Query: 212  TAKTITYGAKYDPQQDIALLCDKLVPTLERLESLSEDKVGHNLKVFRRLATSAKEIAIQK 33
            T KTITYGAK DPQQD+ALLC +LVPTLERLE LSE+K+GH LKVF RLATSAKEIAIQK
Sbjct: 1986 TTKTITYGAKCDPQQDLALLCGQLVPTLERLELLSEEKLGHTLKVFCRLATSAKEIAIQK 2045

Query: 32   LI 27
            +I
Sbjct: 2046 MI 2047


>gb|ABD32200.2| hypothetical protein MtrDRAFT_AC148343g24v2 [Medicago truncatula]
          Length = 425

 Score =  552 bits (1422), Expect = e-155
 Identities = 288/362 (79%), Positives = 316/362 (87%)
 Frame = -2

Query: 1112 NLQGGLRWIDTKLRRDMAVDVDRQRMIINPVLRLVFSLTSLVDTSDFMEVKNKVVRELID 933
            N QGGLRW + +LRRDMAVDVDRQ+MII PVLRLV+SLTSLVDTSD+MEVKNK+VRE+ID
Sbjct: 64   NSQGGLRWAEKRLRRDMAVDVDRQQMIITPVLRLVYSLTSLVDTSDYMEVKNKIVREVID 123

Query: 932  FVKGHQSLFDQVLRLDIAEADELKMEQINLVVGILSKVWPYEESDEYGFVQGLFGMMRAL 753
            FVKGHQSLF QVLRL+IAEADEL+MEQINLVVGILSKVWPYEESDEYGFVQGLFG+M  L
Sbjct: 124  FVKGHQSLFAQVLRLEIAEADELRMEQINLVVGILSKVWPYEESDEYGFVQGLFGLMNVL 183

Query: 752  FSRDSNLKVPGFAQSRVSPENQRNSELQIFNLCXXXXXXXXXLVTKKXXXXXXXXXXXSY 573
            FSRDSN KV GF +SRVSPENQR+SELQIF LC         LVTKK           SY
Sbjct: 184  FSRDSNSKVLGFPRSRVSPENQRSSELQIFKLCFSLSSYLYFLVTKKSLRLQSSDASSSY 243

Query: 572  PTSIELQQPTLILLNSLLTSVTTALERAAEEKSLLLNKIRDINELSRQEVDEIISMCVRQ 393
            PTS+E QQP+L LLNSLL+S TTALERAAEEKSLLLNKIRDINEL+RQEVDEIISMCVRQ
Sbjct: 244  PTSVEFQQPSLSLLNSLLSSATTALERAAEEKSLLLNKIRDINELARQEVDEIISMCVRQ 303

Query: 392  DSVSSSDNIHKRRYIAMVEMCRVVACRDQLIILLLPLSEHVLNIILIHLQESSVALDSTM 213
            +S SSSDNI +RRYIAMVEMCRVV+C DQLI+LLLPLSEHVLNIIL+HLQ+ S A +STM
Sbjct: 304  ESASSSDNIQRRRYIAMVEMCRVVSCTDQLIVLLLPLSEHVLNIILVHLQDCSDAFESTM 363

Query: 212  TAKTITYGAKYDPQQDIALLCDKLVPTLERLESLSEDKVGHNLKVFRRLATSAKEIAIQK 33
            T KTITYGAK DPQQD+ALLC +LVPTLERLE LSE+K+GH LKVF RLATSAKEIAIQK
Sbjct: 364  TTKTITYGAKCDPQQDLALLCGQLVPTLERLELLSEEKLGHTLKVFCRLATSAKEIAIQK 423

Query: 32   LI 27
            +I
Sbjct: 424  MI 425


>ref|XP_003525930.1| PREDICTED: nuclear pore complex protein Nup205-like [Glycine max]
          Length = 1931

 Score =  551 bits (1419), Expect = e-154
 Identities = 293/363 (80%), Positives = 316/363 (87%)
 Frame = -2

Query: 1112 NLQGGLRWIDTKLRRDMAVDVDRQRMIINPVLRLVFSLTSLVDTSDFMEVKNKVVRELID 933
            NLQG LRW++T+LRRDMAVDVDRQRMII PVLRLVFSLTSLVDTSDF+EVKNK+VRE+ID
Sbjct: 1579 NLQGSLRWVETRLRRDMAVDVDRQRMIITPVLRLVFSLTSLVDTSDFLEVKNKIVREVID 1638

Query: 932  FVKGHQSLFDQVLRLDIAEADELKMEQINLVVGILSKVWPYEESDEYGFVQGLFGMMRAL 753
            F+KGHQSLFDQVLRLDIAEADEL+ EQ+NLVVGILSKVWPYEES+EYGFVQGLFG+M AL
Sbjct: 1639 FIKGHQSLFDQVLRLDIAEADELRTEQVNLVVGILSKVWPYEESNEYGFVQGLFGLMHAL 1698

Query: 752  FSRDSNLKVPGFAQSRVSPENQRNSELQIFNLCXXXXXXXXXLVTKKXXXXXXXXXXXSY 573
            FSRDS  K+P F        NQRNSELQ+FNLC         LVTKK           SY
Sbjct: 1699 FSRDS--KIPSF--------NQRNSELQMFNLCYSLSSYLYFLVTKKSLRLQPSDASSSY 1748

Query: 572  PTSIELQQPTLILLNSLLTSVTTALERAAEEKSLLLNKIRDINELSRQEVDEIISMCVRQ 393
              S+ELQQPTL LLNSLL SVTTA ERAAEEKSLLLNKIRDINELSRQEVDEII+MCVRQ
Sbjct: 1749 AASVELQQPTLSLLNSLLFSVTTAFERAAEEKSLLLNKIRDINELSRQEVDEIINMCVRQ 1808

Query: 392  DSVSSSDNIHKRRYIAMVEMCRVVACRDQLIILLLPLSEHVLNIILIHLQESSVALDSTM 213
            DSVSSSDNIHKRRYIAMVEMCRVVA RDQLIILLLPLSEHVLNIILIHLQESSVALDST+
Sbjct: 1809 DSVSSSDNIHKRRYIAMVEMCRVVASRDQLIILLLPLSEHVLNIILIHLQESSVALDSTL 1868

Query: 212  TAKTITYGAKYDPQQDIALLCDKLVPTLERLESLSEDKVGHNLKVFRRLATSAKEIAIQK 33
            + KTI YGAKYD QQD+A+L  KLVPTLERLE LSE+KVGHNLKVFRRLATSAK++AIQK
Sbjct: 1869 STKTIAYGAKYDAQQDVAMLYGKLVPTLERLELLSEEKVGHNLKVFRRLATSAKDLAIQK 1928

Query: 32   LIL 24
            LI+
Sbjct: 1929 LIV 1931


>emb|CBI28192.3| unnamed protein product [Vitis vinifera]
          Length = 1889

 Score =  459 bits (1181), Expect = e-127
 Identities = 245/360 (68%), Positives = 278/360 (77%)
 Frame = -2

Query: 1109 LQGGLRWIDTKLRRDMAVDVDRQRMIINPVLRLVFSLTSLVDTSDFMEVKNKVVRELIDF 930
            ++G  R  +TKLRRD AV++D+Q+ II P+LRLVFSLTSLVDTSDF EVKNK+VRE+IDF
Sbjct: 1530 MKGSFRRFETKLRRDAAVNIDKQQTIIAPILRLVFSLTSLVDTSDFFEVKNKIVREVIDF 1589

Query: 929  VKGHQSLFDQVLRLDIAEADELKMEQINLVVGILSKVWPYEESDEYGFVQGLFGMMRALF 750
            VKGHQ LFDQV++ D+ EADEL MEQINLVVGILSKVWPYEESDEYGFVQGLFGMMR+LF
Sbjct: 1590 VKGHQLLFDQVIQEDVLEADELTMEQINLVVGILSKVWPYEESDEYGFVQGLFGMMRSLF 1649

Query: 749  SRDSNLKVPGFAQSRVSPENQRNSELQIFNLCXXXXXXXXXLVTKKXXXXXXXXXXXSYP 570
            S D   + P   Q   S + QR SEL IF LC         LVTKK            Y 
Sbjct: 1650 SHDLESRTP--TQPVQSLDKQRKSELNIFRLCFSLSSYLYFLVTKKSLRLQVLDGPTDYH 1707

Query: 569  TSIELQQPTLILLNSLLTSVTTALERAAEEKSLLLNKIRDINELSRQEVDEIISMCVRQD 390
                LQQPTL LL  LL SVTTALERAAEEKSLLLNKI+DINELSRQEVDEII+MCVRQD
Sbjct: 1708 APGRLQQPTLTLLVYLLNSVTTALERAAEEKSLLLNKIQDINELSRQEVDEIINMCVRQD 1767

Query: 389  SVSSSDNIHKRRYIAMVEMCRVVACRDQLIILLLPLSEHVLNIILIHLQESSVALDSTMT 210
             VSSSDN  +RRYIAMVEMC+V   RDQLI LLLPL+EHVLN+ILIH Q+ S+   ++ T
Sbjct: 1768 CVSSSDNTQRRRYIAMVEMCQVAGNRDQLITLLLPLAEHVLNVILIHFQDGSITPGTSAT 1827

Query: 209  AKTITYGAKYDPQQDIALLCDKLVPTLERLESLSEDKVGHNLKVFRRLATSAKEIAIQKL 30
             K IT+G K+D  QDI++ C KL+PTLERLE LSEDKVGHNLKVFRRL +S KE+ IQKL
Sbjct: 1828 TKAITFGDKFDNGQDISVFCGKLIPTLERLELLSEDKVGHNLKVFRRLVSSLKELGIQKL 1887


>ref|XP_003633105.1| PREDICTED: nuclear pore complex protein Nup205-like [Vitis vinifera]
          Length = 1934

 Score =  457 bits (1176), Expect = e-126
 Identities = 244/360 (67%), Positives = 277/360 (76%)
 Frame = -2

Query: 1109 LQGGLRWIDTKLRRDMAVDVDRQRMIINPVLRLVFSLTSLVDTSDFMEVKNKVVRELIDF 930
            ++G  R  +TKLRRD AV++D+Q+ II P+LRLVFSLTSLVDTSDF EVKNK+VRE+IDF
Sbjct: 1576 MKGSFRRFETKLRRDAAVNIDKQQTIIAPILRLVFSLTSLVDTSDFFEVKNKIVREVIDF 1635

Query: 929  VKGHQSLFDQVLRLDIAEADELKMEQINLVVGILSKVWPYEESDEYGFVQGLFGMMRALF 750
            VKGHQ LFDQV++ D+ EADEL MEQINLVVGILSKVWPYEESDEYGFVQGLFGMMR+LF
Sbjct: 1636 VKGHQLLFDQVIQEDVLEADELTMEQINLVVGILSKVWPYEESDEYGFVQGLFGMMRSLF 1695

Query: 749  SRDSNLKVPGFAQSRVSPENQRNSELQIFNLCXXXXXXXXXLVTKKXXXXXXXXXXXSYP 570
            S D   + P      V   +QR SEL IF LC         LVTKK            Y 
Sbjct: 1696 SHDLESRTP---TQPVQSLDQRKSELNIFRLCFSLSSYLYFLVTKKSLRLQVLDGPTDYH 1752

Query: 569  TSIELQQPTLILLNSLLTSVTTALERAAEEKSLLLNKIRDINELSRQEVDEIISMCVRQD 390
                LQQPTL LL  LL SVTTALERAAEEKSLLLNKI+DINELSRQEVDEII+MCVRQD
Sbjct: 1753 APGRLQQPTLTLLVYLLNSVTTALERAAEEKSLLLNKIQDINELSRQEVDEIINMCVRQD 1812

Query: 389  SVSSSDNIHKRRYIAMVEMCRVVACRDQLIILLLPLSEHVLNIILIHLQESSVALDSTMT 210
             VSSSDN  +RRYIAMVEMC+V   RDQLI LLLPL+EHVLN+ILIH Q+ S+   ++ T
Sbjct: 1813 CVSSSDNTQRRRYIAMVEMCQVAGNRDQLITLLLPLAEHVLNVILIHFQDGSITPGTSAT 1872

Query: 209  AKTITYGAKYDPQQDIALLCDKLVPTLERLESLSEDKVGHNLKVFRRLATSAKEIAIQKL 30
             K IT+G K+D  QDI++ C KL+PTLERLE LSEDKVGHNLKVFRRL +S KE+ IQKL
Sbjct: 1873 TKAITFGDKFDNGQDISVFCGKLIPTLERLELLSEDKVGHNLKVFRRLVSSLKELGIQKL 1932


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