BLASTX nr result

ID: Glycyrrhiza23_contig00017961 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00017961
         (372 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003535440.1| PREDICTED: RING-H2 finger protein ATL16-like...   100   1e-19
ref|XP_003555510.1| PREDICTED: RING-H2 finger protein ATL16-like...    97   1e-18
ref|XP_003555162.1| PREDICTED: RING-H2 finger protein ATL1-like ...    96   3e-18
ref|XP_003590054.1| RING finger protein [Medicago truncatula] gi...    96   4e-18
ref|XP_002529293.1| ring finger protein, putative [Ricinus commu...    95   7e-18

>ref|XP_003535440.1| PREDICTED: RING-H2 finger protein ATL16-like [Glycine max]
          Length = 367

 Score =  100 bits (249), Expect = 1e-19
 Identities = 69/130 (53%), Positives = 81/130 (62%), Gaps = 6/130 (4%)
 Frame = +1

Query: 1   QNNANCPLCRRHISLVTSQSQIQVDQLLTPRPS----PENQSQNVESFIGGGGEDMVVID 168
           Q+NANCPLCR  ISL    S+  +DQLLT RPS    P +Q+   E+ IGG  ED VVI+
Sbjct: 170 QSNANCPLCRTSISLT---SRFHIDQLLTLRPSSSSYPHDQTPPRENLIGGD-EDFVVIE 225

Query: 169 LDLDNQHDGEGLNLQGTQERGKEELEVPTGPNNPISPSSHRKL--EQKIVQKKARKLHKV 342
           L  D+         Q  QERG   LE+PT P   ISPSS RKL   + + +KKA KL KV
Sbjct: 226 LGSDHDRS------QNLQERGNA-LELPTCP---ISPSSPRKLLEHRNVQKKKAMKLQKV 275

Query: 343 TSMGDECIDI 372
           TSMGDECIDI
Sbjct: 276 TSMGDECIDI 285


>ref|XP_003555510.1| PREDICTED: RING-H2 finger protein ATL16-like [Glycine max]
          Length = 364

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 69/129 (53%), Positives = 80/129 (62%), Gaps = 5/129 (3%)
 Frame = +1

Query: 1   QNNANCPLCRRHISLVTSQSQIQVDQLLTPRPS---PENQSQNVESFIGGGGEDMVVIDL 171
           Q+NANCPLCR  ISL    S+  +DQLL  RPS   P +Q+   E+ I GG ED VVI+L
Sbjct: 169 QSNANCPLCRTTISLT---SRFHIDQLLNLRPSSSYPHDQTPPRENLI-GGDEDFVVIEL 224

Query: 172 DLDNQHDGEGLNLQGTQERGKEELEVPTGPNNPISPSSHRKL--EQKIVQKKARKLHKVT 345
             D  HD      Q  QERG   LE+PT    PISPSS RKL   + + +KK  KL KVT
Sbjct: 225 GSD--HD----RSQNLQERG-NALELPT---CPISPSSPRKLLEHRNVQKKKTMKLQKVT 274

Query: 346 SMGDECIDI 372
           SMGDECIDI
Sbjct: 275 SMGDECIDI 283


>ref|XP_003555162.1| PREDICTED: RING-H2 finger protein ATL1-like [Glycine max]
          Length = 352

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 65/127 (51%), Positives = 79/127 (62%), Gaps = 3/127 (2%)
 Frame = +1

Query: 1   QNNANCPLCRRHISLVTSQSQIQVDQ---LLTPRPSPENQSQNVESFIGGGGEDMVVIDL 171
           QNNA CPLCRR +SL TSQ    VDQ   LLTPR SP+ QSQN E+ IG   ++   + +
Sbjct: 155 QNNAYCPLCRRTVSL-TSQVHHHVDQVNLLLTPRLSPQGQSQNNENLIGAAEDEGGFVVI 213

Query: 172 DLDNQHDGEGLNLQGTQERGKEELEVPTGPNNPISPSSHRKLEQKIVQKKARKLHKVTSM 351
           DLD +HD +    Q  QER     E+PT     IS SS  KL   + +KKARKL KVTS+
Sbjct: 214 DLDGEHDRD----QNLQER----QELPT--CRIISLSSQMKL---LEEKKARKLQKVTSL 260

Query: 352 GDECIDI 372
           GDECI +
Sbjct: 261 GDECIGV 267


>ref|XP_003590054.1| RING finger protein [Medicago truncatula]
           gi|355479102|gb|AES60305.1| RING finger protein
           [Medicago truncatula]
          Length = 321

 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 62/123 (50%), Positives = 79/123 (64%), Gaps = 1/123 (0%)
 Frame = +1

Query: 1   QNNANCPLCRRHISLVTSQSQIQVDQLLTPRPSPENQSQNVESFIGGGGEDMVVIDLD-L 177
           QNNANCPLCRR +S+     +IQV+ ++TPRPSP  + QNVE+ I  G ED V IDLD +
Sbjct: 156 QNNANCPLCRRKVSMTR---EIQVEHVVTPRPSPYFERQNVENII-DGCEDFVSIDLDNI 211

Query: 178 DNQHDGEGLNLQGTQERGKEELEVPTGPNNPISPSSHRKLEQKIVQKKARKLHKVTSMGD 357
           +N H+G+ L+ +  +ERGK ELEVP          SH         KKA KL KV+SMG+
Sbjct: 212 ENGHEGQNLH-ERIEERGK-ELEVPR--------DSH---------KKALKLQKVSSMGN 252

Query: 358 ECI 366
           ECI
Sbjct: 253 ECI 255


>ref|XP_002529293.1| ring finger protein, putative [Ricinus communis]
           gi|223531217|gb|EEF33062.1| ring finger protein,
           putative [Ricinus communis]
          Length = 376

 Score = 94.7 bits (234), Expect = 7e-18
 Identities = 64/135 (47%), Positives = 78/135 (57%), Gaps = 11/135 (8%)
 Frame = +1

Query: 1   QNNANCPLCRRHISLVTSQSQIQVDQLLTPRPSPENQSQNVESFIGGGGEDMVVIDLD-- 174
           QNNANCPLCR  IS  T    I  D+++ P  SP++ +   ES IGG  ED VVI+L   
Sbjct: 166 QNNANCPLCRNSISSTTRS--IPFDRIIAPSSSPQDPNPYSESLIGGD-EDYVVIELGNI 222

Query: 175 ----LDNQHDGEGLNLQGTQERGKEELEVPTGPNNPISPSSHR-KLEQK----IVQKKAR 327
               ++N H+     L   QER     E+      PISPSS R KLEQ+     VQKK+R
Sbjct: 223 NNNIINNSHNPADQTLLAAQERLMNSGELSIA--RPISPSSRRQKLEQRGSSGAVQKKSR 280

Query: 328 KLHKVTSMGDECIDI 372
           K  K+TSMGDECIDI
Sbjct: 281 KFSKLTSMGDECIDI 295


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