BLASTX nr result

ID: Glycyrrhiza23_contig00017960 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00017960
         (449 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003544020.1| PREDICTED: uncharacterized protein LOC100793...   114   6e-24
ref|XP_002514395.1| conserved hypothetical protein [Ricinus comm...   110   2e-22
gb|AAO22623.1| unknown protein [Arabidopsis thaliana]                 104   7e-21
ref|NP_974253.1| methyl-CpG-binding domain protein 4 [Arabidopsi...   104   7e-21
gb|AAF21203.1|AC013483_27 hypothetical protein [Arabidopsis thal...   104   7e-21

>ref|XP_003544020.1| PREDICTED: uncharacterized protein LOC100793802 [Glycine max]
          Length = 1505

 Score =  114 bits (286), Expect = 6e-24
 Identities = 57/95 (60%), Positives = 66/95 (69%)
 Frame = -1

Query: 296  EAGIEEPKVKSSRHKNPMVVKPLSSIEKWRDCYKRKTPDNQWKPPRSHWNLIQEDHADDP 117
            E  +EE K   S     +   P +S EKW + YKRKTPDN WKPPRS   LIQEDH  DP
Sbjct: 1326 EDKLEENKSNCSNKSIEIKRFPPAS-EKWDEAYKRKTPDNTWKPPRSEIVLIQEDHLHDP 1384

Query: 116  WRVLVICMLLNRTTGAQAKNVLLDFFQLCPNAESC 12
            WRVLVICMLLNRT G Q K V+ +FF+LCP+A+SC
Sbjct: 1385 WRVLVICMLLNRTAGGQTKKVVSNFFKLCPDAKSC 1419


>ref|XP_002514395.1| conserved hypothetical protein [Ricinus communis]
           gi|223546492|gb|EEF47991.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 608

 Score =  110 bits (274), Expect = 2e-22
 Identities = 49/76 (64%), Positives = 59/76 (77%)
 Frame = -1

Query: 230 LSSIEKWRDCYKRKTPDNQWKPPRSHWNLIQEDHADDPWRVLVICMLLNRTTGAQAKNVL 51
           LS+ EK  + Y+RKTPDN WKPPRS + L+QEDHA DPWRVLVICMLLN TTG Q + V+
Sbjct: 450 LSAAEKRSEAYRRKTPDNTWKPPRSDFGLLQEDHASDPWRVLVICMLLNCTTGKQVRGVI 509

Query: 50  LDFFQLCPNAESCKNA 3
            DFF LCP+A++   A
Sbjct: 510 SDFFTLCPDAKAATEA 525


>gb|AAO22623.1| unknown protein [Arabidopsis thaliana]
          Length = 407

 Score =  104 bits (260), Expect = 7e-21
 Identities = 54/104 (51%), Positives = 69/104 (66%)
 Frame = -1

Query: 326 SHPFWVNGAQEAGIEEPKVKSSRHKNPMVVKPLSSIEKWRDCYKRKTPDNQWKPPRSHWN 147
           S  F  +G Q    ++ K ++ R K P+V   LS  +K  D Y RKTPDN W PPRS  N
Sbjct: 219 SRYFHADGIQVNESQKEKSRNVR-KTPIVSPVLSLSQKTDDVYLRKTPDNTWVPPRSPCN 277

Query: 146 LIQEDHADDPWRVLVICMLLNRTTGAQAKNVLLDFFQLCPNAES 15
           L+QEDH  DPWRVLVICMLLN+T+GAQ + V+ D F LC +A++
Sbjct: 278 LLQEDHWHDPWRVLVICMLLNKTSGAQTRGVISDLFGLCTDAKT 321


>ref|NP_974253.1| methyl-CpG-binding domain protein 4 [Arabidopsis thaliana]
           gi|114050633|gb|ABI49466.1| At3g07930 [Arabidopsis
           thaliana] gi|332641100|gb|AEE74621.1| methyl-CpG-binding
           domain protein 4 [Arabidopsis thaliana]
          Length = 445

 Score =  104 bits (260), Expect = 7e-21
 Identities = 54/104 (51%), Positives = 69/104 (66%)
 Frame = -1

Query: 326 SHPFWVNGAQEAGIEEPKVKSSRHKNPMVVKPLSSIEKWRDCYKRKTPDNQWKPPRSHWN 147
           S  F  +G Q    ++ K ++ R K P+V   LS  +K  D Y RKTPDN W PPRS  N
Sbjct: 257 SRYFHADGIQVNESQKEKSRNVR-KTPIVSPVLSLSQKTDDVYLRKTPDNTWVPPRSPCN 315

Query: 146 LIQEDHADDPWRVLVICMLLNRTTGAQAKNVLLDFFQLCPNAES 15
           L+QEDH  DPWRVLVICMLLN+T+GAQ + V+ D F LC +A++
Sbjct: 316 LLQEDHWHDPWRVLVICMLLNKTSGAQTRGVISDLFGLCTDAKT 359


>gb|AAF21203.1|AC013483_27 hypothetical protein [Arabidopsis thaliana]
          Length = 419

 Score =  104 bits (260), Expect = 7e-21
 Identities = 54/104 (51%), Positives = 69/104 (66%)
 Frame = -1

Query: 326 SHPFWVNGAQEAGIEEPKVKSSRHKNPMVVKPLSSIEKWRDCYKRKTPDNQWKPPRSHWN 147
           S  F  +G Q    ++ K ++ R K P+V   LS  +K  D Y RKTPDN W PPRS  N
Sbjct: 231 SRYFHADGIQVNESQKEKSRNVR-KTPIVSPVLSLSQKTDDVYLRKTPDNTWVPPRSPCN 289

Query: 146 LIQEDHADDPWRVLVICMLLNRTTGAQAKNVLLDFFQLCPNAES 15
           L+QEDH  DPWRVLVICMLLN+T+GAQ + V+ D F LC +A++
Sbjct: 290 LLQEDHWHDPWRVLVICMLLNKTSGAQTRGVISDLFGLCTDAKT 333


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