BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00017955
         (1388 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003527866.1| PREDICTED: pentatricopeptide repeat-containi...   566   e-159
ref|XP_003523769.1| PREDICTED: pentatricopeptide repeat-containi...   566   e-159
ref|XP_002285611.1| PREDICTED: pentatricopeptide repeat-containi...   499   e-139
ref|XP_004170776.1| PREDICTED: pentatricopeptide repeat-containi...   496   e-138
ref|XP_002889775.1| pentatricopeptide repeat-containing protein ...   486   e-135

>ref|XP_003527866.1| PREDICTED: pentatricopeptide repeat-containing protein At1g09900-like
            [Glycine max]
          Length = 603

 Score =  566 bits (1459), Expect = e-159
 Identities = 288/362 (79%), Positives = 313/362 (86%), Gaps = 3/362 (0%)
 Frame = -1

Query: 1079 RGKARDNTVSRPFILSPDSGVSH-FRKLKNTRPSRNYHSRNRVFAVSKFETFGLNGKSQH 903
            R +  DNTVSRPF+LSP S VSH F KLK TR  +     NRV AVSK E  G+NG+ Q 
Sbjct: 20   RARVSDNTVSRPFVLSPASSVSHHFTKLKATRSRKRLE--NRVSAVSKSEASGMNGRLQQ 77

Query: 902  FGRTPNGNSNN-GIESS-PNGVNGSRNSEEFENNNHLRRLVRNGELEEGFRFLERMTYQG 729
               TPNG+ N  G+ESS PNGVNGSR+ EEF +N HLR+LVRNGELEEG +FLERM YQG
Sbjct: 78   IVSTPNGDLNGIGMESSSPNGVNGSRSFEEFASNIHLRKLVRNGELEEGLKFLERMIYQG 137

Query: 728  DTPDVIVCTNLIRQFCRTGRMKKAARIMEILEDSGVVPNVITYNVLICGYCKSGEIDKAL 549
            D PDVI CT+LIR FCR+G+ +KA RIMEILE+SG VP+VITYNVLI GYCKSGEIDKAL
Sbjct: 138  DIPDVIACTSLIRGFCRSGKTRKATRIMEILENSGAVPDVITYNVLIGGYCKSGEIDKAL 197

Query: 548  QVLERMSVAPDVVTYNTILRSLCDSGNLKQAMEVLDRQLQRECYPDVFTYTILIEATCKE 369
            QVLERMSVAPDVVTYNTILRSLCDSG LK+AMEVLDRQ+QRECYPDV TYTILIEATC +
Sbjct: 198  QVLERMSVAPDVVTYNTILRSLCDSGKLKEAMEVLDRQMQRECYPDVITYTILIEATCND 257

Query: 368  SGVDQAMKLLDEMRIKGCKPDVVTFNVLINGICKEGRLEEAIKFLNNMPSYGCQPNVITH 189
            SGV QAMKLLDEMR KGCKPDVVT+NVLINGICKEGRL+EAIKFLNNMP YGCQPNVITH
Sbjct: 258  SGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNMPLYGCQPNVITH 317

Query: 188  NIILRSFCSTGRWMDAEKLLADMLRKGCTPSVVTFNILINFLCRKGLLGRAIDILENMPK 9
            NIILRS CSTGRWMDAE+LLADMLRKGC+PSVVTFNILINFLCRK LLGRAID+LE MPK
Sbjct: 318  NIILRSMCSTGRWMDAERLLADMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPK 377

Query: 8    HG 3
            HG
Sbjct: 378  HG 379



 Score =  178 bits (452), Expect = 3e-42
 Identities = 92/273 (33%), Positives = 154/273 (56%), Gaps = 3/273 (1%)
 Frame = -1

Query: 812  NNNHLRRLVRNGELEEGFRFLERMTYQGDTPDVIVCTNLIRQFCRTGRMKKAARIMEILE 633
            +N  LR +   G   +  R L  M  +G +P V+    LI   CR   + +A  ++E + 
Sbjct: 317  HNIILRSMCSTGRWMDAERLLADMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMP 376

Query: 632  DSGVVPNVITYNVLICGYCKSGEIDKALQVLERM---SVAPDVVTYNTILRSLCDSGNLK 462
              G +PN ++YN L+ G+C+  ++D+A++ LE M      PD+VTYNT+L +LC  G   
Sbjct: 377  KHGCMPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKAD 436

Query: 461  QAMEVLDRQLQRECYPDVFTYTILIEATCKESGVDQAMKLLDEMRIKGCKPDVVTFNVLI 282
             A+E+L++   + C P + TY  +I+   K    + A +LL+EMR KG KPD++T++ L+
Sbjct: 437  AAVEILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYAAELLEEMRRKGLKPDIITYSTLL 496

Query: 281  NGICKEGRLEEAIKFLNNMPSYGCQPNVITHNIILRSFCSTGRWMDAEKLLADMLRKGCT 102
             G+  EG+++EAIK  ++M     +P+ +T+N I+   C   +   A   LA M+ KGC 
Sbjct: 497  RGLGCEGKVDEAIKIFHDMEGLSIKPSAVTYNAIMLGLCKAQQTSRAIDFLAYMVEKGCK 556

Query: 101  PSVVTFNILINFLCRKGLLGRAIDILENMPKHG 3
            P+  T+ ILI  +  +GL   A+++L  +   G
Sbjct: 557  PTKATYTILIEGIADEGLAEEALELLNELCSRG 589


>ref|XP_003523769.1| PREDICTED: pentatricopeptide repeat-containing protein At1g09900-like
            [Glycine max]
          Length = 602

 Score =  566 bits (1459), Expect = e-159
 Identities = 286/361 (79%), Positives = 313/361 (86%), Gaps = 2/361 (0%)
 Frame = -1

Query: 1079 RGKARDNTVSRPFILSPDSGVSH-FRKLKNTRPSRNYHSRNRVFAVSKFETFGLNGKSQH 903
            R +  DN++SRPF+L PDS VSH F KLK TR  +     NRV AVSK E  GLNG+ Q 
Sbjct: 20   RARVSDNSISRPFVLYPDSSVSHHFSKLKATRSRKRLE--NRVSAVSKSEASGLNGRLQQ 77

Query: 902  FGRTPNGNSNN-GIESSPNGVNGSRNSEEFENNNHLRRLVRNGELEEGFRFLERMTYQGD 726
               TPNG+ N  G+ESSP GVNGSR+ EEF +N HLR+LVRNGELEEG +FLERM YQGD
Sbjct: 78   IVSTPNGDLNVIGMESSPIGVNGSRSFEEFASNIHLRKLVRNGELEEGLKFLERMIYQGD 137

Query: 725  TPDVIVCTNLIRQFCRTGRMKKAARIMEILEDSGVVPNVITYNVLICGYCKSGEIDKALQ 546
             PDVI CT+LIR FCR+G+ KKA RIMEILE+SG VP+VITYNVLI GYCKSGEIDKAL+
Sbjct: 138  IPDVIACTSLIRGFCRSGKTKKATRIMEILENSGAVPDVITYNVLIGGYCKSGEIDKALE 197

Query: 545  VLERMSVAPDVVTYNTILRSLCDSGNLKQAMEVLDRQLQRECYPDVFTYTILIEATCKES 366
            VLERMSVAPDVVTYNTILRSLCDSG LK+AMEVLDRQLQRECYPDV TYTILIEATC +S
Sbjct: 198  VLERMSVAPDVVTYNTILRSLCDSGKLKEAMEVLDRQLQRECYPDVITYTILIEATCNDS 257

Query: 365  GVDQAMKLLDEMRIKGCKPDVVTFNVLINGICKEGRLEEAIKFLNNMPSYGCQPNVITHN 186
            GV QAMKLLDEMR KGCKPDVVT+NVLINGICKEGRL+EAIKFLNNMPSYGC+PNVITHN
Sbjct: 258  GVGQAMKLLDEMRKKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCKPNVITHN 317

Query: 185  IILRSFCSTGRWMDAEKLLADMLRKGCTPSVVTFNILINFLCRKGLLGRAIDILENMPKH 6
            IILRS CSTGRWMDAE+LL+DMLRKGC+PSVVTFNILINFLCRK LLGRAID+LE MPKH
Sbjct: 318  IILRSMCSTGRWMDAERLLSDMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKH 377

Query: 5    G 3
            G
Sbjct: 378  G 378



 Score =  183 bits (465), Expect = 8e-44
 Identities = 93/273 (34%), Positives = 157/273 (57%), Gaps = 3/273 (1%)
 Frame = -1

Query: 812  NNNHLRRLVRNGELEEGFRFLERMTYQGDTPDVIVCTNLIRQFCRTGRMKKAARIMEILE 633
            +N  LR +   G   +  R L  M  +G +P V+    LI   CR   + +A  ++E + 
Sbjct: 316  HNIILRSMCSTGRWMDAERLLSDMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMP 375

Query: 632  DSGVVPNVITYNVLICGYCKSGEIDKALQVLERM---SVAPDVVTYNTILRSLCDSGNLK 462
              G VPN ++YN L+ G+C+  ++D+A++ LE M      PD+VTYNT+L +LC  G + 
Sbjct: 376  KHGCVPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKVD 435

Query: 461  QAMEVLDRQLQRECYPDVFTYTILIEATCKESGVDQAMKLLDEMRIKGCKPDVVTFNVLI 282
             A+E+L++   + C P + TY  +I+   K    + A++LL+EMR KG KPD++T++ L+
Sbjct: 436  AAVEILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYAVELLEEMRRKGLKPDIITYSTLL 495

Query: 281  NGICKEGRLEEAIKFLNNMPSYGCQPNVITHNIILRSFCSTGRWMDAEKLLADMLRKGCT 102
             G+ +EG+++EAIK  ++M     +P+ +T+N I+   C   +   A   LA M+ KGC 
Sbjct: 496  RGLGREGKVDEAIKIFHDMEGLSIKPSAVTYNAIMLGLCKAQQTSRAIDFLAYMVEKGCK 555

Query: 101  PSVVTFNILINFLCRKGLLGRAIDILENMPKHG 3
            P+  T+ ILI  +  +GL   A+++L  +   G
Sbjct: 556  PTEATYTILIEGIADEGLAEEALELLNELCSRG 588


>ref|XP_002285611.1| PREDICTED: pentatricopeptide repeat-containing protein At1g09900-like
            isoform 1 [Vitis vinifera]
          Length = 610

 Score =  499 bits (1285), Expect = e-139
 Identities = 256/362 (70%), Positives = 290/362 (80%), Gaps = 3/362 (0%)
 Frame = -1

Query: 1079 RGKARDNTV---SRPFILSPDSGVSHFRKLKNTRPSRNYHSRNRVFAVSKFETFGLNGKS 909
            R + R N V      F+   D   +  +K+  +R  R    RN+VFA  + +TF  N K 
Sbjct: 33   RARFRSNLVLGYKARFLALSDGTSNECKKIGGSRNQR----RNQVFAALRADTFSSNDKL 88

Query: 908  QHFGRTPNGNSNNGIESSPNGVNGSRNSEEFENNNHLRRLVRNGELEEGFRFLERMTYQG 729
             +  +  + + + G  +S    N S + EE E+NNHLRRLVRNGELE+GF+FLE M Y+G
Sbjct: 89   PYAEKNQHVHLSGGNYTS----NSSSSIEEHESNNHLRRLVRNGELEDGFKFLESMVYRG 144

Query: 728  DTPDVIVCTNLIRQFCRTGRMKKAARIMEILEDSGVVPNVITYNVLICGYCKSGEIDKAL 549
            D PD+I CT+LIR FCR G+ KKA  +MEILE SG VP+VITYNVLI GYCKSGEID AL
Sbjct: 145  DIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPDVITYNVLISGYCKSGEIDNAL 204

Query: 548  QVLERMSVAPDVVTYNTILRSLCDSGNLKQAMEVLDRQLQRECYPDVFTYTILIEATCKE 369
            QVL+RM+VAPDVVTYNTILR+LCDSG LKQAMEVLDRQLQ+ECYPDV TYTILIEATCKE
Sbjct: 205  QVLDRMNVAPDVVTYNTILRTLCDSGKLKQAMEVLDRQLQKECYPDVITYTILIEATCKE 264

Query: 368  SGVDQAMKLLDEMRIKGCKPDVVTFNVLINGICKEGRLEEAIKFLNNMPSYGCQPNVITH 189
            SGV QAMKLLDEMR KG KPDVVT+NVLINGICKEGRL+EAIKFLNNMPSYGCQPNVITH
Sbjct: 265  SGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITH 324

Query: 188  NIILRSFCSTGRWMDAEKLLADMLRKGCTPSVVTFNILINFLCRKGLLGRAIDILENMPK 9
            NIILRS CSTGRWMDAEKLL+DMLRKGC+PSVVTFNILINFLCR+GLLGRAIDILE MP 
Sbjct: 325  NIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPM 384

Query: 8    HG 3
            HG
Sbjct: 385  HG 386



 Score =  198 bits (504), Expect = 2e-48
 Identities = 97/272 (35%), Positives = 169/272 (62%), Gaps = 3/272 (1%)
 Frame = -1

Query: 809  NNHLRRLVRNGELEEGFRFLERMTYQGDTPDVIVCTNLIRQFCRTGRMKKAARIMEILED 630
            N  LR L  +G+L++    L+R   +   PDVI  T LI   C+   + +A ++++ + +
Sbjct: 220  NTILRTLCDSGKLKQAMEVLDRQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRN 279

Query: 629  SGVVPNVITYNVLICGYCKSGEIDKALQVLERM---SVAPDVVTYNTILRSLCDSGNLKQ 459
             G  P+V+TYNVLI G CK G +D+A++ L  M      P+V+T+N ILRS+C +G    
Sbjct: 280  KGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMD 339

Query: 458  AMEVLDRQLQRECYPDVFTYTILIEATCKESGVDQAMKLLDEMRIKGCKPDVVTFNVLIN 279
            A ++L   L++ C P V T+ ILI   C++  + +A+ +L++M + GC P+ +++N L++
Sbjct: 340  AEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLH 399

Query: 278  GICKEGRLEEAIKFLNNMPSYGCQPNVITHNIILRSFCSTGRWMDAEKLLADMLRKGCTP 99
            G CKE +++ AI++L+ M S GC P+++T+N +L + C  G+   A ++L  +  KGC+P
Sbjct: 400  GFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSP 459

Query: 98   SVVTFNILINFLCRKGLLGRAIDILENMPKHG 3
             ++T+N +I+ L + G   RAI +L+ M + G
Sbjct: 460  VLITYNTVIDGLSKVGKTERAIKLLDEMRRKG 491



 Score =  191 bits (486), Expect = 3e-46
 Identities = 98/273 (35%), Positives = 161/273 (58%), Gaps = 3/273 (1%)
 Frame = -1

Query: 812  NNNHLRRLVRNGELEEGFRFLERMTYQGDTPDVIVCTNLIRQFCRTGRMKKAARIMEILE 633
            +N  LR +   G   +  + L  M  +G +P V+    LI   CR G + +A  I+E + 
Sbjct: 324  HNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMP 383

Query: 632  DSGVVPNVITYNVLICGYCKSGEIDKALQVLERM---SVAPDVVTYNTILRSLCDSGNLK 462
              G  PN ++YN L+ G+CK  ++D+A++ L+ M      PD+VTYNT+L +LC  G + 
Sbjct: 384  MHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVD 443

Query: 461  QAMEVLDRQLQRECYPDVFTYTILIEATCKESGVDQAMKLLDEMRIKGCKPDVVTFNVLI 282
             A+E+L++   + C P + TY  +I+   K    ++A+KLLDEMR KG KPD++T++ L+
Sbjct: 444  VAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLV 503

Query: 281  NGICKEGRLEEAIKFLNNMPSYGCQPNVITHNIILRSFCSTGRWMDAEKLLADMLRKGCT 102
            +G+ +EG+++EAIKF +++   G +PN IT+N I+   C + +   A   LA M+ K C 
Sbjct: 504  SGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCK 563

Query: 101  PSVVTFNILINFLCRKGLLGRAIDILENMPKHG 3
            P+  T+ ILI  +  +GL   A+D+L  +   G
Sbjct: 564  PTEATYTILIEGIAYEGLAKEALDLLNELCSRG 596


>ref|XP_004170776.1| PREDICTED: pentatricopeptide repeat-containing protein At1g09900-like
            [Cucumis sativus]
          Length = 665

 Score =  496 bits (1278), Expect = e-138
 Identities = 241/318 (75%), Positives = 275/318 (86%)
 Frame = -1

Query: 956  VFAVSKFETFGLNGKSQHFGRTPNGNSNNGIESSPNGVNGSRNSEEFENNNHLRRLVRNG 777
            V AV + +TF  NG+  H  +  + + N    SS +  N S++SEE ENNNHLRRLVRNG
Sbjct: 65   VRAVPRVDTFSSNGRLSHGEKNLHTHLNGSSSSSSSYSNHSQSSEEVENNNHLRRLVRNG 124

Query: 776  ELEEGFRFLERMTYQGDTPDVIVCTNLIRQFCRTGRMKKAARIMEILEDSGVVPNVITYN 597
            ELEEGF+FLE M  +GD PD+I CT+LIR  C+TG+  KA R+MEILEDSG VP+VITYN
Sbjct: 125  ELEEGFKFLEDMVCRGDIPDIIACTSLIRGLCKTGKTWKATRVMEILEDSGAVPDVITYN 184

Query: 596  VLICGYCKSGEIDKALQVLERMSVAPDVVTYNTILRSLCDSGNLKQAMEVLDRQLQRECY 417
            VLI GYCK+GEI  ALQ+L+RMSV+PDVVTYNTILR+LCDSG LK+AMEVLDRQ+QRECY
Sbjct: 185  VLISGYCKTGEIGSALQLLDRMSVSPDVVTYNTILRTLCDSGKLKEAMEVLDRQMQRECY 244

Query: 416  PDVFTYTILIEATCKESGVDQAMKLLDEMRIKGCKPDVVTFNVLINGICKEGRLEEAIKF 237
            PDV TYTILIEATCKESGV QAMKLLDEMR KGCKPDVVT+NVLINGICKEGRL+EAI+F
Sbjct: 245  PDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGICKEGRLDEAIRF 304

Query: 236  LNNMPSYGCQPNVITHNIILRSFCSTGRWMDAEKLLADMLRKGCTPSVVTFNILINFLCR 57
            LN+MPSYGCQPNVITHNIILRS CSTGRWMDAEK LA+M+RKGC+PSVVTFNILINFLCR
Sbjct: 305  LNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKFLAEMIRKGCSPSVVTFNILINFLCR 364

Query: 56   KGLLGRAIDILENMPKHG 3
            KGL+GRAID+LE MP+HG
Sbjct: 365  KGLIGRAIDVLEKMPQHG 382



 Score =  186 bits (471), Expect = 2e-44
 Identities = 94/273 (34%), Positives = 158/273 (57%), Gaps = 3/273 (1%)
 Frame = -1

Query: 812  NNNHLRRLVRNGELEEGFRFLERMTYQGDTPDVIVCTNLIRQFCRTGRMKKAARIMEILE 633
            +N  LR +   G   +  +FL  M  +G +P V+    LI   CR G + +A  ++E + 
Sbjct: 320  HNIILRSMCSTGRWMDAEKFLAEMIRKGCSPSVVTFNILINFLCRKGLIGRAIDVLEKMP 379

Query: 632  DSGVVPNVITYNVLICGYCKSGEIDKALQVLERM---SVAPDVVTYNTILRSLCDSGNLK 462
              G  PN ++YN L+   CK  ++++A++ L+ M      PD+VTYNT+L +LC  G + 
Sbjct: 380  QHGCTPNSLSYNPLLHALCKDKKMERAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVD 439

Query: 461  QAMEVLDRQLQRECYPDVFTYTILIEATCKESGVDQAMKLLDEMRIKGCKPDVVTFNVLI 282
             A+E+L++   + C P + TY  +I+   K    D A+KLLDEM+ KG KPD++T++ L+
Sbjct: 440  VAVEILNQLGSKGCSPVLITYNTVIDGLSKVGKTDDAIKLLDEMKGKGLKPDIITYSTLV 499

Query: 281  NGICKEGRLEEAIKFLNNMPSYGCQPNVITHNIILRSFCSTGRWMDAEKLLADMLRKGCT 102
             G+ +EG+++EAI F +++   G +PN IT+N I+   C   + + A   LA M+ +GC 
Sbjct: 500  GGLSREGKVDEAIAFFHDLEEMGVKPNAITYNSIMLGLCKARQTVRAIDFLAYMVARGCK 559

Query: 101  PSVVTFNILINFLCRKGLLGRAIDILENMPKHG 3
            P+  ++ ILI  L  +GL   A+++L  +   G
Sbjct: 560  PTETSYMILIEGLAYEGLAKEALELLNELCSRG 592



 Score =  112 bits (280), Expect = 2e-22
 Identities = 60/215 (27%), Positives = 109/215 (50%), Gaps = 3/215 (1%)
 Frame = -1

Query: 809  NNHLRRLVRNGELEEGFRFLERMTYQGDTPDVIVCTNLIRQFCRTGRMKKAARIMEILED 630
            N  L  L ++ ++E    +L+ M  +G  PD++    L+   C+ G++  A  I+  L  
Sbjct: 391  NPLLHALCKDKKMERAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLGS 450

Query: 629  SGVVPNVITYNVLICGYCKSGEIDKALQVLERMS---VAPDVVTYNTILRSLCDSGNLKQ 459
             G  P +ITYN +I G  K G+ D A+++L+ M    + PD++TY+T++  L   G + +
Sbjct: 451  KGCSPVLITYNTVIDGLSKVGKTDDAIKLLDEMKGKGLKPDIITYSTLVGGLSREGKVDE 510

Query: 458  AMEVLDRQLQRECYPDVFTYTILIEATCKESGVDQAMKLLDEMRIKGCKPDVVTFNVLIN 279
            A+       +    P+  TY  ++   CK     +A+  L  M  +GCKP   ++ +LI 
Sbjct: 511  AIAFFHDLEEMGVKPNAITYNSIMLGLCKARQTVRAIDFLAYMVARGCKPTETSYMILIE 570

Query: 278  GICKEGRLEEAIKFLNNMPSYGCQPNVITHNIILR 174
            G+  EG  +EA++ LN + S G         ++++
Sbjct: 571  GLAYEGLAKEALELLNELCSRGVVKKSSAEQVVVK 605


>ref|XP_002889775.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
            subsp. lyrata] gi|297335617|gb|EFH66034.1|
            pentatricopeptide repeat-containing protein [Arabidopsis
            lyrata subsp. lyrata]
          Length = 598

 Score =  486 bits (1251), Expect = e-135
 Identities = 240/324 (74%), Positives = 274/324 (84%), Gaps = 3/324 (0%)
 Frame = -1

Query: 965  RNR---VFAVSKFETFGLNGKSQHFGRTPNGNSNNGIESSPNGVNGSRNSEEFENNNHLR 795
            RNR   V A S+ E+ GLNG++Q F    +G+SN+      +  N S   E+ E+NNHLR
Sbjct: 51   RNRLVLVSAASQVESSGLNGRAQKFDTLASGHSNSNGNGHFSSANSSFVLEDVESNNHLR 110

Query: 794  RLVRNGELEEGFRFLERMTYQGDTPDVIVCTNLIRQFCRTGRMKKAARIMEILEDSGVVP 615
            +LVR GELEEGF+FLE M Y G+ PD+I CT LIR FCR G+ +KAA+I+E+LE SG VP
Sbjct: 111  QLVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRMGKTRKAAKILEVLEGSGAVP 170

Query: 614  NVITYNVLICGYCKSGEIDKALQVLERMSVAPDVVTYNTILRSLCDSGNLKQAMEVLDRQ 435
            +VITYNV+I GYCK+GEI+ AL VL+RMSV+PDVVTYNTILRSLCDSG LKQAMEVLDR 
Sbjct: 171  DVITYNVMISGYCKAGEINNALSVLDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRM 230

Query: 434  LQRECYPDVFTYTILIEATCKESGVDQAMKLLDEMRIKGCKPDVVTFNVLINGICKEGRL 255
            LQR+CYPDV TYTILIEATC++SGV QAMKLLDEMR +GC PDVVT+NVL+NGICKEGRL
Sbjct: 231  LQRDCYPDVITYTILIEATCRDSGVGQAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRL 290

Query: 254  EEAIKFLNNMPSYGCQPNVITHNIILRSFCSTGRWMDAEKLLADMLRKGCTPSVVTFNIL 75
            +EAIKFLN+MPS GCQPNVITHNIILRS CSTGRWMDAEKLLADMLRKG +PSVVTFNIL
Sbjct: 291  DEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNIL 350

Query: 74   INFLCRKGLLGRAIDILENMPKHG 3
            INFLCRKGLLGRAIDILE MPKHG
Sbjct: 351  INFLCRKGLLGRAIDILEKMPKHG 374



 Score =  188 bits (478), Expect = 3e-45
 Identities = 96/273 (35%), Positives = 156/273 (57%), Gaps = 3/273 (1%)
 Frame = -1

Query: 812  NNNHLRRLVRNGELEEGFRFLERMTYQGDTPDVIVCTNLIRQFCRTGRMKKAARIMEILE 633
            +N  LR +   G   +  + L  M  +G +P V+    LI   CR G + +A  I+E + 
Sbjct: 312  HNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMP 371

Query: 632  DSGVVPNVITYNVLICGYCKSGEIDKALQVLERM---SVAPDVVTYNTILRSLCDSGNLK 462
              G  PN ++YN L+ G+CK  ++D+A++ LERM      PD+VTYNT+L +LC  G ++
Sbjct: 372  KHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVE 431

Query: 461  QAMEVLDRQLQRECYPDVFTYTILIEATCKESGVDQAMKLLDEMRIKGCKPDVVTFNVLI 282
             A+E+L++   + C P + TY  +I+   K     +A+KLLDEMR K  KPD +T++ L+
Sbjct: 432  DAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLV 491

Query: 281  NGICKEGRLEEAIKFLNNMPSYGCQPNVITHNIILRSFCSTGRWMDAEKLLADMLRKGCT 102
             G+ +EG+++EAIKF +     G +PN +T N I+   C T +   A   L  M+ +GC 
Sbjct: 492  GGLSREGKVDEAIKFFHEFERMGVRPNAVTFNSIMLGLCKTRQTDRAIDFLVYMINRGCK 551

Query: 101  PSVVTFNILINFLCRKGLLGRAIDILENMPKHG 3
            P+  ++ ILI  L  +G+   A+++L  +   G
Sbjct: 552  PTETSYTILIEGLAYEGMAKEALELLNELCNKG 584