BLASTX nr result

ID: Glycyrrhiza23_contig00017902 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00017902
         (352 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003522986.1| PREDICTED: protein COBRA-like [Glycine max]        90   2e-16
ref|XP_003525437.1| PREDICTED: LOW QUALITY PROTEIN: protein COBR...    89   3e-16
gb|AFK41534.1| unknown [Lotus japonicus]                               89   4e-16
ref|XP_003550707.1| PREDICTED: protein COBRA-like [Glycine max]        88   6e-16
ref|XP_003527117.1| PREDICTED: protein COBRA-like [Glycine max]        86   3e-15

>ref|XP_003522986.1| PREDICTED: protein COBRA-like [Glycine max]
          Length = 456

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 46/60 (76%), Positives = 48/60 (80%), Gaps = 1/60 (1%)
 Frame = -1

Query: 178 LTTIGSVVPRGGXXXXXXXL-FSCSTFTSTEAYDPLDPTGNITIKWDVINWTPDGYVAVV 2
           L  IGSVVPRG        L FS STF+STEAYDPLDPTGNITIKWDVI+WTPDGYVAVV
Sbjct: 6   LPAIGSVVPRGAFAAVLLLLLFSFSTFSSTEAYDPLDPTGNITIKWDVISWTPDGYVAVV 65


>ref|XP_003525437.1| PREDICTED: LOW QUALITY PROTEIN: protein COBRA-like [Glycine max]
          Length = 436

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 43/65 (66%), Positives = 48/65 (73%), Gaps = 1/65 (1%)
 Frame = -1

Query: 193 MGSIWLTTIGSVVPRGGXXXXXXXLFS-CSTFTSTEAYDPLDPTGNITIKWDVINWTPDG 17
           M S+W  T GSVVPRG            C+TFTSTEA+D LDPTGNITIKWDVI+WTPDG
Sbjct: 1   MLSLWFPTAGSVVPRGDFFAILLLPLLLCTTFTSTEAHDALDPTGNITIKWDVISWTPDG 60

Query: 16  YVAVV 2
           Y+AVV
Sbjct: 61  YIAVV 65


>gb|AFK41534.1| unknown [Lotus japonicus]
          Length = 432

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 45/64 (70%), Positives = 49/64 (76%)
 Frame = -1

Query: 193 MGSIWLTTIGSVVPRGGXXXXXXXLFSCSTFTSTEAYDPLDPTGNITIKWDVINWTPDGY 14
           M S+ L+TIGS   RGG       + SCSTFTSTEAYD LDPTGNITIKWDVI+WTPDGY
Sbjct: 1   MESMRLSTIGS---RGGLPFLLLLVLSCSTFTSTEAYDALDPTGNITIKWDVISWTPDGY 57

Query: 13  VAVV 2
           VA V
Sbjct: 58  VATV 61


>ref|XP_003550707.1| PREDICTED: protein COBRA-like [Glycine max]
          Length = 454

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 43/65 (66%), Positives = 48/65 (73%), Gaps = 1/65 (1%)
 Frame = -1

Query: 193 MGSIWLTTIGSVVPRGGXXXXXXXLFS-CSTFTSTEAYDPLDPTGNITIKWDVINWTPDG 17
           M S+WL+T GSVV RG            C+TFTSTEAYD LDP GNITIKWDVI+WTPDG
Sbjct: 1   MVSLWLSTAGSVVHRGDFFTILLLPLLLCTTFTSTEAYDALDPIGNITIKWDVISWTPDG 60

Query: 16  YVAVV 2
           Y+AVV
Sbjct: 61  YIAVV 65


>ref|XP_003527117.1| PREDICTED: protein COBRA-like [Glycine max]
          Length = 456

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 45/60 (75%), Positives = 46/60 (76%), Gaps = 1/60 (1%)
 Frame = -1

Query: 178 LTTIGSVVPRGGXXXXXXXL-FSCSTFTSTEAYDPLDPTGNITIKWDVINWTPDGYVAVV 2
           L  IGSV PRG        L FS STFTS EAYDPLDPTGNITIKWDVI+WTPDGYVAVV
Sbjct: 6   LPAIGSVFPRGVFAALLLMLLFSFSTFTSIEAYDPLDPTGNITIKWDVISWTPDGYVAVV 65


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