BLASTX nr result

ID: Glycyrrhiza23_contig00017838 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00017838
         (609 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003538574.1| PREDICTED: small heat shock protein, chlorop...   144   9e-33
gb|ACU20181.1| unknown [Glycine max]                                  144   9e-33
ref|XP_003601844.1| Chloroplast small heat shock protein [Medica...   138   7e-31
ref|XP_003552791.1| PREDICTED: small heat shock protein, chlorop...    96   6e-18
ref|XP_004135300.1| PREDICTED: 25.3 kDa heat shock protein, chlo...    95   1e-17

>ref|XP_003538574.1| PREDICTED: small heat shock protein, chloroplastic-like [Glycine
           max]
          Length = 235

 Score =  144 bits (364), Expect = 9e-33
 Identities = 71/94 (75%), Positives = 79/94 (84%), Gaps = 3/94 (3%)
 Frame = +2

Query: 335 RPTHLKPLRAMAGDHAREKLDPVS--SHNKH-QPQPKRRVAPASPIGLWDRFPTARTVQE 505
           RPT +KP++ M GD AREKL+ V    HNKH QP PK +VAP  P+GLWDRFPTARTVQE
Sbjct: 23  RPTQVKPMKVMMGD-AREKLEHVHVPKHNKHHQPLPKNKVAPTPPVGLWDRFPTARTVQE 81

Query: 506 MMETMERIMEDPFAMSTMEWPSSPLPSEGVGGYR 607
           MMETMER+MEDPFA ST+EWPSSPLPSEGVGGYR
Sbjct: 82  MMETMERMMEDPFAFSTLEWPSSPLPSEGVGGYR 115


>gb|ACU20181.1| unknown [Glycine max]
          Length = 235

 Score =  144 bits (364), Expect = 9e-33
 Identities = 71/94 (75%), Positives = 79/94 (84%), Gaps = 3/94 (3%)
 Frame = +2

Query: 335 RPTHLKPLRAMAGDHAREKLDPVS--SHNKH-QPQPKRRVAPASPIGLWDRFPTARTVQE 505
           RPT +KP++ M GD AREKL+ V    HNKH QP PK +VAP  P+GLWDRFPTARTVQE
Sbjct: 23  RPTQVKPMKVMMGD-AREKLEHVHVPKHNKHHQPLPKNKVAPTPPVGLWDRFPTARTVQE 81

Query: 506 MMETMERIMEDPFAMSTMEWPSSPLPSEGVGGYR 607
           MMETMER+MEDPFA ST+EWPSSPLPSEGVGGYR
Sbjct: 82  MMETMERMMEDPFAFSTLEWPSSPLPSEGVGGYR 115


>ref|XP_003601844.1| Chloroplast small heat shock protein [Medicago truncatula]
           gi|355490892|gb|AES72095.1| Chloroplast small heat shock
           protein [Medicago truncatula]
          Length = 221

 Score =  138 bits (348), Expect = 7e-31
 Identities = 70/96 (72%), Positives = 77/96 (80%), Gaps = 3/96 (3%)
 Frame = +2

Query: 329 IPRPTHLKPLRAMAGDHAREKLDPVSSHNK---HQPQPKRRVAPASPIGLWDRFPTARTV 499
           + R TH   +RAM G+ AREKLD VS  N    HQ QPK+RV PA+PIGLWDRFPT RTV
Sbjct: 20  LSRQTHFFRVRAMTGE-AREKLDHVSRSNNIKHHQSQPKKRVFPAAPIGLWDRFPTTRTV 78

Query: 500 QEMMETMERIMEDPFAMSTMEWPSSPLPSEGVGGYR 607
           QEMMETME +MEDPFAMST+EWPSSPLP EGVGGYR
Sbjct: 79  QEMMETMESMMEDPFAMSTIEWPSSPLPIEGVGGYR 114


>ref|XP_003552791.1| PREDICTED: small heat shock protein, chloroplastic-like [Glycine
           max]
          Length = 171

 Score = 95.5 bits (236), Expect = 6e-18
 Identities = 44/48 (91%), Positives = 46/48 (95%)
 Frame = +2

Query: 464 GLWDRFPTARTVQEMMETMERIMEDPFAMSTMEWPSSPLPSEGVGGYR 607
           GL DRFPTARTVQEMMETMER+MEDPFA ST+EWPSSPLPSEGVGGYR
Sbjct: 8   GLRDRFPTARTVQEMMETMERMMEDPFAFSTLEWPSSPLPSEGVGGYR 55


>ref|XP_004135300.1| PREDICTED: 25.3 kDa heat shock protein, chloroplastic-like [Cucumis
           sativus] gi|449512976|ref|XP_004164194.1| PREDICTED:
           25.3 kDa heat shock protein, chloroplastic-like [Cucumis
           sativus]
          Length = 232

 Score = 94.7 bits (234), Expect = 1e-17
 Identities = 50/85 (58%), Positives = 61/85 (71%), Gaps = 4/85 (4%)
 Frame = +2

Query: 356 LRAMAGDHAREKLDPVSSHNKHQPQ----PKRRVAPASPIGLWDRFPTARTVQEMMETME 523
           ++A+ GD  RE LD +    + + Q    PK+RVAP +PIGLWDRFPTARTVQ+MMETME
Sbjct: 32  VKAVRGD-GRENLDHLQRTIEKEKQTAQPPKKRVAPVAPIGLWDRFPTARTVQQMMETME 90

Query: 524 RIMEDPFAMSTMEWPSSPLPSEGVG 598
           RIM+DPFA S   WPS P  S+G G
Sbjct: 91  RIMDDPFAYSG-AWPSPPFTSDGAG 114


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