BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00017827
         (1033 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003543555.1| PREDICTED: DNA topoisomerase 6 subunit B-lik...   610   e-172
ref|XP_003597480.1| DNA topoisomerase 6 subunit B [Medicago trun...   606   e-171
emb|CBI16435.3| unnamed protein product [Vitis vinifera]              585   e-165
ref|XP_003543556.1| PREDICTED: DNA topoisomerase 6 subunit B-lik...   569   e-160
ref|NP_188714.2| DNA topoisomerase 6 subunit B [Arabidopsis thal...   556   e-156

>ref|XP_003543555.1| PREDICTED: DNA topoisomerase 6 subunit B-like isoform 1 [Glycine max]
          Length = 673

 Score =  610 bits (1574), Expect = e-172
 Identities = 310/331 (93%), Positives = 317/331 (95%)
 Frame = +3

Query: 3    KQNLLQFLQHEFVNISKSYAERLIGEMGPDFSPKMAVKSLTSQQLVRIHQLLRQAKFDDP 182
            KQNLLQFLQHEFVNISKSYAERLIGEMGPDF  KM VKSLTSQQLVRIHQLLRQAKFDDP
Sbjct: 343  KQNLLQFLQHEFVNISKSYAERLIGEMGPDFGSKMTVKSLTSQQLVRIHQLLRQAKFDDP 402

Query: 183  SGHCLSPAGEYNLRLGIIKELHPDMVATYSGSAQVFEGHPFIVEAGVSVGGKDVKQGVNI 362
            SGHCLSPAGEYNLRLGIIKELHPDMVATYSGSAQVFEGHPFIVEAGVSVGGK+VKQG+NI
Sbjct: 403  SGHCLSPAGEYNLRLGIIKELHPDMVATYSGSAQVFEGHPFIVEAGVSVGGKNVKQGLNI 462

Query: 363  FRFANRIPLLFEQGADVVTRTALKRINWSSYKINQLQDKIGVFVSIVSTKIPFKGTGKEY 542
            FRFANRIPLLFEQGADVVTRTA KRINWSSYKINQ+QDKIGVFVSIVSTKIPFKGTGKEY
Sbjct: 463  FRFANRIPLLFEQGADVVTRTAHKRINWSSYKINQMQDKIGVFVSIVSTKIPFKGTGKEY 522

Query: 543  IGDDISEIASAVKSAIQQCCIQLKSKIVKKMQAREQQERKRNLSRYIPDATGAVYNVLKE 722
            IGDDI+EIASAVK AIQQCC+QLKSKIVKKM AREQQERKRNLSRYIPDA+GAVYNVLKE
Sbjct: 523  IGDDITEIASAVKYAIQQCCVQLKSKIVKKMHAREQQERKRNLSRYIPDASGAVYNVLKE 582

Query: 723  MTQLHASKKKRYGDDDVELLRKVSENLITKETLSEKLAKHVEQVDYEMALEYATQSGVSE 902
            MTQLHASKK RYGDDD ELL KVSENLITKETL EKL+KHVEQVDYEMALEYATQSGVSE
Sbjct: 583  MTQLHASKKIRYGDDDAELLSKVSENLITKETLCEKLSKHVEQVDYEMALEYATQSGVSE 642

Query: 903  EPRETIYIQSLEAENKMIDLHAPLFVFRVFQ 995
            EPRETIYIQSLEAENKMIDL  P  VFRVFQ
Sbjct: 643  EPRETIYIQSLEAENKMIDLQTPFIVFRVFQ 673


>ref|XP_003597480.1| DNA topoisomerase 6 subunit B [Medicago truncatula]
            gi|355486528|gb|AES67731.1| DNA topoisomerase 6 subunit B
            [Medicago truncatula]
          Length = 671

 Score =  606 bits (1563), Expect = e-171
 Identities = 304/331 (91%), Positives = 321/331 (96%)
 Frame = +3

Query: 3    KQNLLQFLQHEFVNISKSYAERLIGEMGPDFSPKMAVKSLTSQQLVRIHQLLRQAKFDDP 182
            KQNLLQFLQHEFVNISK +AERLIGEMGPDFS KMAVKSLTSQQLVRIHQL RQAKFDDP
Sbjct: 341  KQNLLQFLQHEFVNISKPHAERLIGEMGPDFSSKMAVKSLTSQQLVRIHQLFRQAKFDDP 400

Query: 183  SGHCLSPAGEYNLRLGIIKELHPDMVATYSGSAQVFEGHPFIVEAGVSVGGKDVKQGVNI 362
            SGHCLSPAGEYNLRLGIIKELHPDMVATYSGSAQVFEGHPFIVEAGVSVGGKDVKQG+NI
Sbjct: 401  SGHCLSPAGEYNLRLGIIKELHPDMVATYSGSAQVFEGHPFIVEAGVSVGGKDVKQGLNI 460

Query: 363  FRFANRIPLLFEQGADVVTRTALKRINWSSYKINQLQDKIGVFVSIVSTKIPFKGTGKEY 542
            FRFANRIPLLFEQGADVVTRTALKRINWSSYKINQ+QDKIGVFVSIVSTKIPFKGTGKEY
Sbjct: 461  FRFANRIPLLFEQGADVVTRTALKRINWSSYKINQVQDKIGVFVSIVSTKIPFKGTGKEY 520

Query: 543  IGDDISEIASAVKSAIQQCCIQLKSKIVKKMQAREQQERKRNLSRYIPDATGAVYNVLKE 722
            IGDDI+EIASAVKSAIQQCCIQLKSKI+K++QAREQQERKRNLSRYIPDA+GA YNVLK+
Sbjct: 521  IGDDITEIASAVKSAIQQCCIQLKSKIMKRIQAREQQERKRNLSRYIPDASGAFYNVLKQ 580

Query: 723  MTQLHASKKKRYGDDDVELLRKVSENLITKETLSEKLAKHVEQVDYEMALEYATQSGVSE 902
            M  L+ SKK RYGDDDVELLRK+SE+L+TKET SEKLAKHVEQVDYEMALE+ATQSGVSE
Sbjct: 581  MLPLNPSKKSRYGDDDVELLRKISEDLVTKETFSEKLAKHVEQVDYEMALEFATQSGVSE 640

Query: 903  EPRETIYIQSLEAENKMIDLHAPLFVFRVFQ 995
            EPRETIYIQ+L+AENK IDLHAP+FVFRVFQ
Sbjct: 641  EPRETIYIQALDAENKTIDLHAPIFVFRVFQ 671


>emb|CBI16435.3| unnamed protein product [Vitis vinifera]
          Length = 673

 Score =  585 bits (1508), Expect = e-165
 Identities = 291/331 (87%), Positives = 313/331 (94%)
 Frame = +3

Query: 3    KQNLLQFLQHEFVNISKSYAERLIGEMGPDFSPKMAVKSLTSQQLVRIHQLLRQAKFDDP 182
            K+NLLQFLQHEFVNI KSYAERLIGEMGPDFSPKMAVKSLTSQQ+VRIHQL RQAKFDDP
Sbjct: 343  KENLLQFLQHEFVNIGKSYAERLIGEMGPDFSPKMAVKSLTSQQIVRIHQLFRQAKFDDP 402

Query: 183  SGHCLSPAGEYNLRLGIIKELHPDMVATYSGSAQVFEGHPFIVEAGVSVGGKDVKQGVNI 362
            SG CLSPAGEYNLRLGIIKELHPDMVATYSGSAQVFEGHPF+VEAGVS+GGKDVKQG+NI
Sbjct: 403  SGDCLSPAGEYNLRLGIIKELHPDMVATYSGSAQVFEGHPFMVEAGVSIGGKDVKQGLNI 462

Query: 363  FRFANRIPLLFEQGADVVTRTALKRINWSSYKINQLQDKIGVFVSIVSTKIPFKGTGKEY 542
            FRFANRIPLLFEQGADVVTRTALKRINW+SYKINQ QDKIGVFVSIVSTKIPFKGTGKEY
Sbjct: 463  FRFANRIPLLFEQGADVVTRTALKRINWNSYKINQAQDKIGVFVSIVSTKIPFKGTGKEY 522

Query: 543  IGDDISEIASAVKSAIQQCCIQLKSKIVKKMQAREQQERKRNLSRYIPDATGAVYNVLKE 722
            IGDDISEIASAVKS+IQQCCIQLKSKIVKK+QAR QQERKRNLS+YIPDATGA+Y+VL+E
Sbjct: 523  IGDDISEIASAVKSSIQQCCIQLKSKIVKKIQARVQQERKRNLSKYIPDATGAIYDVLRE 582

Query: 723  MTQLHASKKKRYGDDDVELLRKVSENLITKETLSEKLAKHVEQVDYEMALEYATQSGVSE 902
            M QLHASKKKRY D+D ++LRKVS + ITK+TLSEKLAKHVEQVDYEMALEYATQSGVSE
Sbjct: 583  MAQLHASKKKRYEDEDADVLRKVSTHSITKQTLSEKLAKHVEQVDYEMALEYATQSGVSE 642

Query: 903  EPRETIYIQSLEAENKMIDLHAPLFVFRVFQ 995
            EPRE IY+QSLE     ID H+P+F FR++Q
Sbjct: 643  EPREAIYLQSLEDGKNFIDFHSPVFAFRLYQ 673


>ref|XP_003543556.1| PREDICTED: DNA topoisomerase 6 subunit B-like isoform 2 [Glycine max]
          Length = 656

 Score =  569 bits (1466), Expect = e-160
 Identities = 294/331 (88%), Positives = 300/331 (90%)
 Frame = +3

Query: 3    KQNLLQFLQHEFVNISKSYAERLIGEMGPDFSPKMAVKSLTSQQLVRIHQLLRQAKFDDP 182
            KQNLLQFLQHEFVNISKSYAERLIGEMGPDF  KM VKSLTSQQLVRIHQLLRQAKFDDP
Sbjct: 343  KQNLLQFLQHEFVNISKSYAERLIGEMGPDFGSKMTVKSLTSQQLVRIHQLLRQAKFDDP 402

Query: 183  SGHCLSPAGEYNLRLGIIKELHPDMVATYSGSAQVFEGHPFIVEAGVSVGGKDVKQGVNI 362
            SGHCLSPAGEYNLRLGIIKELHPDMVATYSGSAQVFEGHPFIVEAGVSVGGK+VKQG+NI
Sbjct: 403  SGHCLSPAGEYNLRLGIIKELHPDMVATYSGSAQVFEGHPFIVEAGVSVGGKNVKQGLNI 462

Query: 363  FRFANRIPLLFEQGADVVTRTALKRINWSSYKINQLQDKIGVFVSIVSTKIPFKGTGKEY 542
            FRFANRIPLLFEQGADVVTRTA KRINWSSYKINQ+QDKIGVFVSIVSTKIPFKGT    
Sbjct: 463  FRFANRIPLLFEQGADVVTRTAHKRINWSSYKINQMQDKIGVFVSIVSTKIPFKGT---- 518

Query: 543  IGDDISEIASAVKSAIQQCCIQLKSKIVKKMQAREQQERKRNLSRYIPDATGAVYNVLKE 722
                          AIQQCC+QLKSKIVKKM AREQQERKRNLSRYIPDA+GAVYNVLKE
Sbjct: 519  -------------YAIQQCCVQLKSKIVKKMHAREQQERKRNLSRYIPDASGAVYNVLKE 565

Query: 723  MTQLHASKKKRYGDDDVELLRKVSENLITKETLSEKLAKHVEQVDYEMALEYATQSGVSE 902
            MTQLHASKK RYGDDD ELL KVSENLITKETL EKL+KHVEQVDYEMALEYATQSGVSE
Sbjct: 566  MTQLHASKKIRYGDDDAELLSKVSENLITKETLCEKLSKHVEQVDYEMALEYATQSGVSE 625

Query: 903  EPRETIYIQSLEAENKMIDLHAPLFVFRVFQ 995
            EPRETIYIQSLEAENKMIDL  P  VFRVFQ
Sbjct: 626  EPRETIYIQSLEAENKMIDLQTPFIVFRVFQ 656


>ref|NP_188714.2| DNA topoisomerase 6 subunit B [Arabidopsis thaliana]
            gi|75169001|sp|Q9C5V6.1|TOP6B_ARATH RecName: Full=DNA
            topoisomerase 6 subunit B; Short=AtTOP6B; AltName:
            Full=Protein BRASSINOSTEROID INSENSITIVE 3; AltName:
            Full=Protein ELONGATED HYPOCOTYL 6; AltName: Full=Protein
            ROOT HAIRLESS 3 gi|12331188|emb|CAC24690.1| topoisomerase
            6 subunit B [Arabidopsis thaliana]
            gi|332642901|gb|AEE76422.1| DNA topoisomerase 6 subunit B
            [Arabidopsis thaliana]
          Length = 670

 Score =  556 bits (1433), Expect = e-156
 Identities = 277/330 (83%), Positives = 308/330 (93%), Gaps = 1/330 (0%)
 Frame = +3

Query: 3    KQNLLQFLQHEFVNISKSYAERLIGEMGPDFSPKMAVKSLTSQQLVRIHQLLRQAKFDDP 182
            K+ LLQFLQ+EFVNI+K+ A RLIGEMGPDF P MAVKS+TSQQ+VRIHQL RQAKFDDP
Sbjct: 339  KKTLLQFLQNEFVNINKTLAARLIGEMGPDFGPSMAVKSVTSQQMVRIHQLFRQAKFDDP 398

Query: 183  SGHCLSPAGEYNLRLGIIKELHPDMVATYSGSAQVFEGHPFIVEAGVSVGGKDVKQGVNI 362
            SG CLSPAGEYNLRLGIIKELHPDMVATYSGSAQVFEGHPFIVEAGVS+GG+DVKQG+NI
Sbjct: 399  SGDCLSPAGEYNLRLGIIKELHPDMVATYSGSAQVFEGHPFIVEAGVSLGGRDVKQGINI 458

Query: 363  FRFANRIPLLFEQGADVVTRTALKRINWSSYKINQLQDKIGVFVSIVSTKIPFKGTGKEY 542
            FRFANRIPLLFEQGADVVTRTALKRINW+SYKINQ QDKIGVFVSIVSTKIPFKGTGKEY
Sbjct: 459  FRFANRIPLLFEQGADVVTRTALKRINWNSYKINQTQDKIGVFVSIVSTKIPFKGTGKEY 518

Query: 543  IGDDISEIASAVKSAIQQCCIQLKSKIVKKMQAREQQERKRNLSRYIPDATGAVYNVLKE 722
            IGDDISEIA+AVKSAIQQCCIQLKSKIVK++QAREQQERKR+LSRYIPDATGAVY VLK+
Sbjct: 519  IGDDISEIATAVKSAIQQCCIQLKSKIVKRLQAREQQERKRSLSRYIPDATGAVYEVLKQ 578

Query: 723  MTQLHASKKKRYGDDDVELLRKVSENLITKETLSEKLAKHVEQVDYEMALEYATQSGVSE 902
            MT+ H +K+KRYG++D+ +L KVS+ +ITKETL EKLA+HVEQVDYEMALEYATQSGVSE
Sbjct: 579  MTEEHKTKRKRYGEEDIVMLDKVSKQIITKETLKEKLAEHVEQVDYEMALEYATQSGVSE 638

Query: 903  EPRETIYIQSLEA-ENKMIDLHAPLFVFRV 989
            EPRE IY+Q L+  ++  IDLH+P FVFR+
Sbjct: 639  EPRENIYLQHLDPNKSNFIDLHSPTFVFRL 668