BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00017806
         (524 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003537204.1| PREDICTED: DNA-directed RNA polymerase I sub...   233   1e-59
ref|XP_003518107.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed...   220   8e-56
ref|XP_003607990.1| DNA-directed RNA polymerase subunit beta [Me...   196   2e-48
ref|XP_002277555.1| PREDICTED: DNA-directed RNA polymerase I sub...   189   2e-46
ref|XP_002526734.1| DNA-directed RNA polymerase I largest subuni...   189   2e-46

>ref|XP_003537204.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1-like [Glycine
           max]
          Length = 1653

 Score =  233 bits (594), Expect = 1e-59
 Identities = 114/149 (76%), Positives = 129/149 (86%)
 Frame = +2

Query: 77  MVLANEGATNRVEAVAFSFLTDEELRRSSRVKITNPILLDGLHRPVPGGLYDPALGPLDE 256
           MVL  EGATN VEAVAFSFLTD+E+RRSSRVKIT+PIL+D L  PVP GLYD ALGP D+
Sbjct: 1   MVLTTEGATNSVEAVAFSFLTDDEIRRSSRVKITSPILVDFLLHPVPDGLYDAALGPFDD 60

Query: 257 KSPCKSCGQTSKHCPGHFGHIELVSPVYNPLMFNILSIILQRTCFSCHHFQATRHDVEMR 436
           KS CKSCGQTSKHCPGHFGHIELVSPVYNPLMFNILS ILQRTCF+CHHF+A   +V++R
Sbjct: 61  KSLCKSCGQTSKHCPGHFGHIELVSPVYNPLMFNILSNILQRTCFTCHHFRAPSKEVDIR 120

Query: 437 TSQLELIMKGNITRAKNLDSAKPEEFMNS 523
           TSQLELIMKG+I RAK L+S  P + ++S
Sbjct: 121 TSQLELIMKGDIIRAKRLESIIPGKSVDS 149


>ref|XP_003518107.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase I
           subunit RPA190-like [Glycine max]
          Length = 1568

 Score =  220 bits (561), Expect = 8e-56
 Identities = 106/141 (75%), Positives = 121/141 (85%)
 Frame = +2

Query: 89  NEGATNRVEAVAFSFLTDEELRRSSRVKITNPILLDGLHRPVPGGLYDPALGPLDEKSPC 268
           ++GATN VE VAFSFLTD+E+RRSSRVKITNPIL+D L  PVPGGLYD A+GPLD+KS C
Sbjct: 49  SQGATNSVEVVAFSFLTDDEIRRSSRVKITNPILVDYLXAPVPGGLYDAAMGPLDDKSLC 108

Query: 269 KSCGQTSKHCPGHFGHIELVSPVYNPLMFNILSIILQRTCFSCHHFQATRHDVEMRTSQL 448
           KSCGQT+KHCP HFGHIELVSPVYNPL FNI S ILQRTCFSCHHFQ+ R +V++R  QL
Sbjct: 109 KSCGQTTKHCPDHFGHIELVSPVYNPLTFNIPSNILQRTCFSCHHFQSLRKEVDIRAFQL 168

Query: 449 ELIMKGNITRAKNLDSAKPEE 511
           ELIMKG+I  AKNL+S   E+
Sbjct: 169 ELIMKGDIIMAKNLESIITEK 189


>ref|XP_003607990.1| DNA-directed RNA polymerase subunit beta [Medicago truncatula]
           gi|355509045|gb|AES90187.1| DNA-directed RNA polymerase
           subunit beta [Medicago truncatula]
          Length = 1628

 Score =  196 bits (498), Expect = 2e-48
 Identities = 96/150 (64%), Positives = 118/150 (78%), Gaps = 1/150 (0%)
 Frame = +2

Query: 77  MVLANEGATNRVEAVAFSFLTDEELRRSSRVKITNPILLDGLHRPVPGGLYDPALGPL-D 253
           M LANEGATN +E+VAFSFLT+EEL +SSRVK+T+  L + +  PV GGLYDPA GPL D
Sbjct: 1   MALANEGATNAIESVAFSFLTNEELLKSSRVKVTDTNLCNNIGHPVRGGLYDPAFGPLLD 60

Query: 254 EKSPCKSCGQTSKHCPGHFGHIELVSPVYNPLMFNILSIILQRTCFSCHHFQATRHDVEM 433
            +S C+SCG +  HC GHFGHIELVSPVYNPLMF  L  IL RTCFSCH+F+A+R +V+ 
Sbjct: 61  NRSNCESCGMSKDHCSGHFGHIELVSPVYNPLMFLFLGKILNRTCFSCHYFRASRDEVKR 120

Query: 434 RTSQLELIMKGNITRAKNLDSAKPEEFMNS 523
           R SQLELI+KGNI++AK+L   K  E ++S
Sbjct: 121 RASQLELILKGNISKAKSLGEIKLNETIDS 150


>ref|XP_002277555.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA1-like [Vitis
           vinifera]
          Length = 1740

 Score =  189 bits (481), Expect = 2e-46
 Identities = 89/144 (61%), Positives = 109/144 (75%)
 Frame = +2

Query: 80  VLANEGATNRVEAVAFSFLTDEELRRSSRVKITNPILLDGLHRPVPGGLYDPALGPLDEK 259
           V A  G T  VEAV FSF TDEE+R+ S  KIT+P++LD + RPVPGGLYDPALG +DE 
Sbjct: 51  VTATSGTTEFVEAVKFSFFTDEEVRKYSFKKITSPLMLDSVQRPVPGGLYDPALGSIDEN 110

Query: 260 SPCKSCGQTSKHCPGHFGHIELVSPVYNPLMFNILSIILQRTCFSCHHFQATRHDVEMRT 439
           +PC+SCGQ S +CPGH GHI+LVS VYNPL+FN+L  +LQ+TCF CHHF+ +   V+   
Sbjct: 111 TPCQSCGQRSFYCPGHCGHIDLVSSVYNPLLFNLLHNLLQKTCFFCHHFKTSSSLVQKYV 170

Query: 440 SQLELIMKGNITRAKNLDSAKPEE 511
           SQLELI KG++  AKNLDS  P E
Sbjct: 171 SQLELISKGDVVGAKNLDSISPSE 194


>ref|XP_002526734.1| DNA-directed RNA polymerase I largest subunit, putative [Ricinus
           communis] gi|223533923|gb|EEF35648.1| DNA-directed RNA
           polymerase I largest subunit, putative [Ricinus
           communis]
          Length = 1686

 Score =  189 bits (480), Expect = 2e-46
 Identities = 89/141 (63%), Positives = 110/141 (78%)
 Frame = +2

Query: 89  NEGATNRVEAVAFSFLTDEELRRSSRVKITNPILLDGLHRPVPGGLYDPALGPLDEKSPC 268
           ++GAT  +++++FSFLTDEE+R+ S VKITNP LLD + RPVPGGLYDPALGPL E++ C
Sbjct: 8   SKGATESIDSISFSFLTDEEVRKHSFVKITNPRLLDLVERPVPGGLYDPALGPLSERTIC 67

Query: 269 KSCGQTSKHCPGHFGHIELVSPVYNPLMFNILSIILQRTCFSCHHFQATRHDVEMRTSQL 448
           K+CGQ S +CPGH GHI+LVSPVYNPL+FN L  +LQRTCF C HF+  R  VE    QL
Sbjct: 68  KTCGQRSTNCPGHCGHIDLVSPVYNPLLFNFLHKLLQRTCFLCFHFRMQRGQVEKCIKQL 127

Query: 449 ELIMKGNITRAKNLDSAKPEE 511
           ELI+KG+I  AK L+S  P E
Sbjct: 128 ELIVKGDIVGAKRLESVSPSE 148